| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is 238028262
Identifier: 238028262
GI number: 238028262
Start: 3091306
End: 3092028
Strand: Reverse
Name: 238028262
Synonym: bglu_1g27160
Alternate gene names: NA
Gene position: 3092028-3091306 (Counterclockwise)
Preceding gene: 238028263
Following gene: 238028261
Centisome position: 79.15
GC content: 65.28
Gene sequence:
>723_bases ATGCTTTGCAACCACTACGACAGACAGACGGGCCAATACCTGAGCAGTACGCTGGCTGATTCGGATCCGAAAGACGACAG CCGATGGCTCGAACCAGCATTTTCGACCGTTACGCCGATACCCGAGCGCAAGCCGCTGACGTGGCCGTTCTGGAAGGACG GCGCCTGGGTACTGATGCCCGACTATCGTGGTCGCGTGCTGTATCGAACCGATACCGGCGAGCGATCCGAGATCCTGGCA GCCGGCGTTACGCCGGCCGACGCCGGTCTCACCGAGACGCCACGGCCGTCCGACGAGTATCGCTGGAGCGATGGCGCCTG GGAGATCGACCCGGACATCGTGGCACGCAAGGCCAAGGAGCGGGCGACGGCGGAATTTCAGCATCGGCTGGCGAACGCAC AGACGAAAAACTACGGTCGAGCGGACGCGCACGCGGCCGGCCTGCTGACGGATGTCGAGGAGGCGCAGTTCGCTGCGTGG TCCAAGTACCAGATCGATCTCGTACGCGTCGTGAATGCGCCGGACTTCCCGGCCTCGGCAGTGTGGCCAGTCGAACCGGA CGACGAAGCGATCCGCCGCGACGTCGAGGCGAAGCGAGCCGCTGCCGCAGCGGCGGTGAAAGCAGCCGAGGCACAGCAGG CGGCGGACAAGACGGAAGCGGCCCAGGCTGGCCGGGTCGACCCAGATCGCGTGTCGGATGCCGACAGCGCTCGTGAAAAG TAA
Upstream 100 bases:
>100_bases GCGCACGCGATCCACGTTCAAGCCGATGGCGGCGCCGAAGCGCGTCCGCGCAACGTCGCGTTGCTGGCGATGATTCGCGC CTATTGATGAGGGAGAAGAC
Downstream 100 bases:
>100_bases CTTTTCAGACATTGATTCAATCATTCATAGAGCCGCCCACTTGGGCGGCTTTCTCATTTCTGGAGACCGGTATGGGAGCA ACATCGTTTTTCCATGGCAT
Product: putative phage tail fiber assembly protein
Products: NA
Alternate protein names: Phage Tail Fiber Assembly Protein; Bacteriophage-Acquired Protein; Tail Fiber Assembly-Like Protein; Tail Fiber Assembly Protein Lambdoid Prophage E; Tail Fiber Assembly Protein Homolog; Tail Assembly Chaperone Gp
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MLCNHYDRQTGQYLSSTLADSDPKDDSRWLEPAFSTVTPIPERKPLTWPFWKDGAWVLMPDYRGRVLYRTDTGERSEILA AGVTPADAGLTETPRPSDEYRWSDGAWEIDPDIVARKAKERATAEFQHRLANAQTKNYGRADAHAAGLLTDVEEAQFAAW SKYQIDLVRVVNAPDFPASAVWPVEPDDEAIRRDVEAKRAAAAAAVKAAEAQQAADKTEAAQAGRVDPDRVSDADSAREK
Sequences:
>Translated_240_residues MLCNHYDRQTGQYLSSTLADSDPKDDSRWLEPAFSTVTPIPERKPLTWPFWKDGAWVLMPDYRGRVLYRTDTGERSEILA AGVTPADAGLTETPRPSDEYRWSDGAWEIDPDIVARKAKERATAEFQHRLANAQTKNYGRADAHAAGLLTDVEEAQFAAW SKYQIDLVRVVNAPDFPASAVWPVEPDDEAIRRDVEAKRAAAAAAVKAAEAQQAADKTEAAQAGRVDPDRVSDADSAREK >Mature_240_residues MLCNHYDRQTGQYLSSTLADSDPKDDSRWLEPAFSTVTPIPERKPLTWPFWKDGAWVLMPDYRGRVLYRTDTGERSEILA AGVTPADAGLTETPRPSDEYRWSDGAWEIDPDIVARKAKERATAEFQHRLANAQTKNYGRADAHAAGLLTDVEEAQFAAW SKYQIDLVRVVNAPDFPASAVWPVEPDDEAIRRDVEAKRAAAAAAVKAAEAQQAADKTEAAQAGRVDPDRVSDADSAREK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26585; Mature: 26585
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLCNHYDRQTGQYLSSTLADSDPKDDSRWLEPAFSTVTPIPERKPLTWPFWKDGAWVLMP CCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEC DYRGRVLYRTDTGERSEILAAGVTPADAGLTETPRPSDEYRWSDGAWEIDPDIVARKAKE CCCCEEEEECCCCCCHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHH RATAEFQHRLANAQTKNYGRADAHAAGLLTDVEEAQFAAWSKYQIDLVRVVNAPDFPASA HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCC VWPVEPDDEAIRRDVEAKRAAAAAAVKAAEAQQAADKTEAAQAGRVDPDRVSDADSAREK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHCCC >Mature Secondary Structure MLCNHYDRQTGQYLSSTLADSDPKDDSRWLEPAFSTVTPIPERKPLTWPFWKDGAWVLMP CCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEC DYRGRVLYRTDTGERSEILAAGVTPADAGLTETPRPSDEYRWSDGAWEIDPDIVARKAKE CCCCEEEEECCCCCCHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHH RATAEFQHRLANAQTKNYGRADAHAAGLLTDVEEAQFAAWSKYQIDLVRVVNAPDFPASA HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCC VWPVEPDDEAIRRDVEAKRAAAAAAVKAAEAQQAADKTEAAQAGRVDPDRVSDADSAREK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA