Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is 238028248
Identifier: 238028248
GI number: 238028248
Start: 3079399
End: 3079842
Strand: Direct
Name: 238028248
Synonym: bglu_1g27020
Alternate gene names: NA
Gene position: 3079399-3079842 (Clockwise)
Preceding gene: 238028247
Following gene: 238028249
Centisome position: 78.83
GC content: 55.86
Gene sequence:
>444_bases GTGCGCGCCCTTCCTCGCACTGGAGAAAAGTGTAAGCAATGCCCGCCCGAGCAAACCGGTGTGCCGGCACGTCGGCGCTA CCACATGAATCGTGAACCTCGGGAGTATCAAGGCCGCATCACCGGCCGACCGTACAGTGTCGAGGAAGGATGGAGCGAAG AATGGGCATGGCTCGGCACGGATTTCGACGGGTTCCAGCAACCGGAATGCCTCTTGCAGGAAGCGAAAGGTGACTATGAT CAGTTCTTCGATCCTCAGACGAAGAAGCCGGTTACATGGTTCAAAGGGCTTTCCAAAATCACGGTTGAGATAGAAGAGCG CGCGATGAAGGTGCATGCAAACCCGCCCACCAAACTCCAGTACTATTTCCAGACTCCGCTAACGATGTCCTATTTCCGCA CCACGCTCGCGGAAAACGGAATTCCCTACGTCGTCACTGGTTGA
Upstream 100 bases:
>100_bases GGCGCGAGTTGGCGCCGCCTTGTTGGGCGGGACGGCGGTGGCAGGAACGGCGAGCCTATCGGGTGACACGACAAAGGATC AGAGCAGCACAACGCCAGCA
Downstream 100 bases:
>100_bases CCATGAAAATCACTTCCCGCTTTCGAGATCCGCTGCATGATGCGTCGAACCTGCCGACCGTCTTTGAACAACTCGGATCG ATCGCCGAGGCGATACATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MRALPRTGEKCKQCPPEQTGVPARRRYHMNREPREYQGRITGRPYSVEEGWSEEWAWLGTDFDGFQQPECLLQEAKGDYD QFFDPQTKKPVTWFKGLSKITVEIEERAMKVHANPPTKLQYYFQTPLTMSYFRTTLAENGIPYVVTG
Sequences:
>Translated_147_residues MRALPRTGEKCKQCPPEQTGVPARRRYHMNREPREYQGRITGRPYSVEEGWSEEWAWLGTDFDGFQQPECLLQEAKGDYD QFFDPQTKKPVTWFKGLSKITVEIEERAMKVHANPPTKLQYYFQTPLTMSYFRTTLAENGIPYVVTG >Mature_147_residues MRALPRTGEKCKQCPPEQTGVPARRRYHMNREPREYQGRITGRPYSVEEGWSEEWAWLGTDFDGFQQPECLLQEAKGDYD QFFDPQTKKPVTWFKGLSKITVEIEERAMKVHANPPTKLQYYFQTPLTMSYFRTTLAENGIPYVVTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17188; Mature: 17188
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRALPRTGEKCKQCPPEQTGVPARRRYHMNREPREYQGRITGRPYSVEEGWSEEWAWLGT CCCCCCCCHHHHCCCCCCCCCCHHHHHCCCCCCHHHCCEECCCCCCCCCCCCCCCEEECC DFDGFQQPECLLQEAKGDYDQFFDPQTKKPVTWFKGLSKITVEIEERAMKVHANPPTKLQ CCCCCCCHHHHHHHHCCCHHHHCCCCCCCCCHHHCCCHHEEEEEECCEEEEECCCCCEEE YYFQTPLTMSYFRTTLAENGIPYVVTG EEEECCCHHHHHHHHHHCCCCCEEEEC >Mature Secondary Structure MRALPRTGEKCKQCPPEQTGVPARRRYHMNREPREYQGRITGRPYSVEEGWSEEWAWLGT CCCCCCCCHHHHCCCCCCCCCCHHHHHCCCCCCHHHCCEECCCCCCCCCCCCCCCEEECC DFDGFQQPECLLQEAKGDYDQFFDPQTKKPVTWFKGLSKITVEIEERAMKVHANPPTKLQ CCCCCCCHHHHHHHHCCCHHHHCCCCCCCCCHHHCCCHHEEEEEECCEEEEECCCCCEEE YYFQTPLTMSYFRTTLAENGIPYVVTG EEEECCCHHHHHHHHHHCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA