Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is 238028247
Identifier: 238028247
GI number: 238028247
Start: 3078885
End: 3079364
Strand: Direct
Name: 238028247
Synonym: bglu_1g27010
Alternate gene names: NA
Gene position: 3078885-3079364 (Clockwise)
Preceding gene: 238028246
Following gene: 238028248
Centisome position: 78.81
GC content: 60.0
Gene sequence:
>480_bases ATGCTTGAACTGACAGACGAACAGGTCGCAGGTCTTGCCGAGATCGATGCACGCGGATACGTCGAGCGCATCCGACAGGA TCTCGTCAAAGGGGATCCGAAGTTAGCAGACGACGACAAGCTGCCGACGCGCCTCTGGAAGGCGTACCTCGCTGCTATTC GGCTCGACATCCAGTCCGACGAGAACGTGGCCGCTTTTCTCCGAATCGAGGCGTACGCACCGAATTTTTACGAGAAGCCA GCGATACGCGCGTGGCTAACCCGGCCCGGCCGCTCGGCCGATGAACGCTTCCGTGATTATCTTCGCGTCATCAAATGGCG TATCGACCATCCGAAATACACTGAGGGAGATCGAAATGGCGGGACTGGCAGTGCCGATAATCGAGGGAGCAGCGGTGGAA CTTGGGCCAGTATTGGCGCGAGTTGGCGCCGCCTTGTTGGGCGGGACGGCGGTGGCAGGAACGGCGAGCCTATCGGGTGA
Upstream 100 bases:
>100_bases ATGGCATCACTGATGACCTTCAGTCAGCGCATGCAGTTCTTTGTCCCGACCTTTGACTGGCTCGTCGAATTGAACGGAAC ACTGAAGGGAGTACATCCGC
Downstream 100 bases:
>100_bases CACGACAAAGGATCAGAGCAGCACAACGCCAGCAGTGCGCGCCCTTCCTCGCACTGGAGAAAAGTGTAAGCAATGCCCGC CCGAGCAAACCGGTGTGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MLELTDEQVAGLAEIDARGYVERIRQDLVKGDPKLADDDKLPTRLWKAYLAAIRLDIQSDENVAAFLRIEAYAPNFYEKP AIRAWLTRPGRSADERFRDYLRVIKWRIDHPKYTEGDRNGGTGSADNRGSSGGTWASIGASWRRLVGRDGGGRNGEPIG
Sequences:
>Translated_159_residues MLELTDEQVAGLAEIDARGYVERIRQDLVKGDPKLADDDKLPTRLWKAYLAAIRLDIQSDENVAAFLRIEAYAPNFYEKP AIRAWLTRPGRSADERFRDYLRVIKWRIDHPKYTEGDRNGGTGSADNRGSSGGTWASIGASWRRLVGRDGGGRNGEPIG >Mature_159_residues MLELTDEQVAGLAEIDARGYVERIRQDLVKGDPKLADDDKLPTRLWKAYLAAIRLDIQSDENVAAFLRIEAYAPNFYEKP AIRAWLTRPGRSADERFRDYLRVIKWRIDHPKYTEGDRNGGTGSADNRGSSGGTWASIGASWRRLVGRDGGGRNGEPIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17804; Mature: 17804
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLELTDEQVAGLAEIDARGYVERIRQDLVKGDPKLADDDKLPTRLWKAYLAAIRLDIQSD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC ENVAAFLRIEAYAPNFYEKPAIRAWLTRPGRSADERFRDYLRVIKWRIDHPKYTEGDRNG CCEEEEEEEECCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC GTGSADNRGSSGGTWASIGASWRRLVGRDGGGRNGEPIG CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MLELTDEQVAGLAEIDARGYVERIRQDLVKGDPKLADDDKLPTRLWKAYLAAIRLDIQSD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC ENVAAFLRIEAYAPNFYEKPAIRAWLTRPGRSADERFRDYLRVIKWRIDHPKYTEGDRNG CCEEEEEEEECCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC GTGSADNRGSSGGTWASIGASWRRLVGRDGGGRNGEPIG CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA