| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028241
Identifier: 238028241
GI number: 238028241
Start: 3072540
End: 3072950
Strand: Reverse
Name: 238028241
Synonym: bglu_1g26950
Alternate gene names: NA
Gene position: 3072950-3072540 (Counterclockwise)
Preceding gene: 238028250
Following gene: 238028240
Centisome position: 78.66
GC content: 67.64
Gene sequence:
>411_bases ATGATCAGCAAACGATGGATGGCCGCCACGCTTTGCGCTACCGCGCTTGCCGCGTCCGCCGGCGTCGCGCATGCCGCGCA GCCGCGCGTGTATTTCGTCGAGCCGAAGGACGGCGCCACGGTGTCGAACCCGGTGCACGTGGTGTTCGGCGTCGACGGCA TGGCGATCAAGCCGGCCGGCGACCTGACGCCGAACACCGGGCATCACCACCTCGAAATCGACGGCGGCCCGGTGCCGAAG GATCAGGTGATCCCCGCCACGGAGCGCTCGCTGCACTTCGGCAAAGGCCAGACGGAAACCGACCTGAAGCTGCCGCCCGG CCCGCACACGCTCACGCTGCAGTTCGGCGACGGCGCGCATCGCTCCTACGGGCCTGATCTGAGCCAGACGATCCACATCG ACGTCAAGTAA
Upstream 100 bases:
>100_bases CGGCGCCCTCGCGCGCCACAGTGTATGCTTGCGGCGCTTCACCCCTATCCCCGTACCGCCTGACAACAAAACAGCAGGCA ATAGGAAAAAGGAGAGAACG
Downstream 100 bases:
>100_bases GCGGCCGCCGCATCCCAGCCGCCGCGCCCGCCCGCTCGCCGGGCGGGCGCCACCGCGGCACGCCGAGGCGCGTTCCCGCT CACCCCCAGGTGTTTCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MISKRWMAATLCATALAASAGVAHAAQPRVYFVEPKDGATVSNPVHVVFGVDGMAIKPAGDLTPNTGHHHLEIDGGPVPK DQVIPATERSLHFGKGQTETDLKLPPGPHTLTLQFGDGAHRSYGPDLSQTIHIDVK
Sequences:
>Translated_136_residues MISKRWMAATLCATALAASAGVAHAAQPRVYFVEPKDGATVSNPVHVVFGVDGMAIKPAGDLTPNTGHHHLEIDGGPVPK DQVIPATERSLHFGKGQTETDLKLPPGPHTLTLQFGDGAHRSYGPDLSQTIHIDVK >Mature_136_residues MISKRWMAATLCATALAASAGVAHAAQPRVYFVEPKDGATVSNPVHVVFGVDGMAIKPAGDLTPNTGHHHLEIDGGPVPK DQVIPATERSLHFGKGQTETDLKLPPGPHTLTLQFGDGAHRSYGPDLSQTIHIDVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14359; Mature: 14359
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISKRWMAATLCATALAASAGVAHAAQPRVYFVEPKDGATVSNPVHVVFGVDGMAIKPAG CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEECCCEEEEEECCCEEECCCC DLTPNTGHHHLEIDGGPVPKDQVIPATERSLHFGKGQTETDLKLPPGPHTLTLQFGDGAH CCCCCCCCEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCEECCCCCCEEEEEECCCCC RSYGPDLSQTIHIDVK CCCCCCCCEEEEEEEC >Mature Secondary Structure MISKRWMAATLCATALAASAGVAHAAQPRVYFVEPKDGATVSNPVHVVFGVDGMAIKPAG CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEECCCEEEEEECCCEEECCCC DLTPNTGHHHLEIDGGPVPKDQVIPATERSLHFGKGQTETDLKLPPGPHTLTLQFGDGAH CCCCCCCCEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCEECCCCCCEEEEEECCCCC RSYGPDLSQTIHIDVK CCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA