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The map label for this gene is rfaQ [H]

Identifier: 238028201

GI number: 238028201

Start: 3017834

End: 3019018

Strand: Reverse

Name: rfaQ [H]

Synonym: bglu_1g26530

Alternate gene names: 238028201

Gene position: 3019018-3017834 (Counterclockwise)

Preceding gene: 238028202

Following gene: 238028197

Centisome position: 77.28

GC content: 72.15

Gene sequence:

>1185_bases
TTGGCTGCCCTGTTTCCCGATCATCCGCCCCGCAGCATTCTCGTCGTCGCGACGCGGCGGATCGGCGACGTCCTGCTGAC
GACGCCGATCGTCCGCTCGCTGAAGGCGCACTGGCCCGACACGCCGATCGACATGCTGGTGTTTCGCGGCACCGAAGGCG
TGCTGGAAGGCAATCCCGACATCCGCAACGTGCTCGTGGTCGCGCAGCGCGCCAAGCTCGGCGAACGCCTGCGTGACGCG
GCGCGCCTCTGGCGCCGCTACGATCTGGCCTGCGCGGCGCTCAGTTCCGACCGGCCGCGTTATTACACCTGGTTCGCCGG
CCGGCGCCGCGTCGGGCTGGTCGATCCGAACCGTGTCGGCATCGGGCCGCGTCTGCTGCTGAACCGGATCGCCCTCAACG
ATCACGAGCATGAGCACACGGTAGCCAGCACGCTTGCGCTGGCGCCGCAGATCGGCATCGAGCCGGTGCCCGAGGTGGTG
GCGCCGGGCCTCGGCGACGATCCCATGCGGCGCGCCCGCTTCGATGCGCTGCTGGCCGCCTCGCCCGCCGTCGCGGCGGG
GCGGCCGCTCGTCGTGCTGCATCCGTACCCGATGTTCGCGTACAAGCAATGGCGCCGCGACGGCTGGGTCGAGCTGATCG
ACTGGCTGCGCGGGCTCGGCCATGCCGTTGCGCTGAGCGGCGGGCCGGCCGACCACGAGCGTGAATATGCCGAACGCGTC
GCGCGCGATGCCGGCGGCGACGTGCTGAATCTGGTGGGACGCCTGTCGTTCGGCGAGAGTGCCGAGCTGGTGCGGCGCGC
GAAGCTGTTCATCGGACCCGATACCGGCGCGACGCACGTGGCCGCCGCGACCGGCACGCCCGTCATCGCGCTGTTCGGGC
CGTCCGACCCGGTGCGCTGGGGGCCGTGGCCGCAGCGCTGGCAGGGCGGCGGCAAGCCTTGGCCGCTGGTCGGCTCGGCG
CGCCGCGGCAACGTCTATCTGCTGCAGGGCGAGGGCAGTTGCGTGCCGTGCCGCCAGGAAGGTTGCGAACGCAATGTCGC
GAGCTACAGCGACTGCCTGATGCAGATGTCGACCGCCCGCGTCGCGACGGTCGCGGCCCAGATGCTCGGCTTGCCGGCCG
AGGCCGCGCGCGCGGCGCCCTCGACGGTGATCGACACGACGGGGCTGGTGCGCCCGCGAGCCTGA

Upstream 100 bases:

>100_bases
AATCGCGTACTGAACCGCTGCGGTGCCGCGCCCGCGCGCGCGGCACCGCGCCATCTCGCATCGTGCGAGCTTCGTGAGCC
CCCACCACCGAACGACTGCC

Downstream 100 bases:

>100_bases
GCGCGGCCCCGGCGCTCGCATTCCCGCGCCTCGCCCCTCCTGCCTTGGCTGGCTTCCCGGCCGTCCCGCGCGGGGCGCCG
CTTACGCGCGCGCCGTCGCG

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 393

Protein sequence:

>394_residues
MAALFPDHPPRSILVVATRRIGDVLLTTPIVRSLKAHWPDTPIDMLVFRGTEGVLEGNPDIRNVLVVAQRAKLGERLRDA
ARLWRRYDLACAALSSDRPRYYTWFAGRRRVGLVDPNRVGIGPRLLLNRIALNDHEHEHTVASTLALAPQIGIEPVPEVV
APGLGDDPMRRARFDALLAASPAVAAGRPLVVLHPYPMFAYKQWRRDGWVELIDWLRGLGHAVALSGGPADHEREYAERV
ARDAGGDVLNLVGRLSFGESAELVRRAKLFIGPDTGATHVAAATGTPVIALFGPSDPVRWGPWPQRWQGGGKPWPLVGSA
RRGNVYLLQGEGSCVPCRQEGCERNVASYSDCLMQMSTARVATVAAQMLGLPAEAARAAPSTVIDTTGLVRPRA

Sequences:

>Translated_394_residues
MAALFPDHPPRSILVVATRRIGDVLLTTPIVRSLKAHWPDTPIDMLVFRGTEGVLEGNPDIRNVLVVAQRAKLGERLRDA
ARLWRRYDLACAALSSDRPRYYTWFAGRRRVGLVDPNRVGIGPRLLLNRIALNDHEHEHTVASTLALAPQIGIEPVPEVV
APGLGDDPMRRARFDALLAASPAVAAGRPLVVLHPYPMFAYKQWRRDGWVELIDWLRGLGHAVALSGGPADHEREYAERV
ARDAGGDVLNLVGRLSFGESAELVRRAKLFIGPDTGATHVAAATGTPVIALFGPSDPVRWGPWPQRWQGGGKPWPLVGSA
RRGNVYLLQGEGSCVPCRQEGCERNVASYSDCLMQMSTARVATVAAQMLGLPAEAARAAPSTVIDTTGLVRPRA
>Mature_393_residues
AALFPDHPPRSILVVATRRIGDVLLTTPIVRSLKAHWPDTPIDMLVFRGTEGVLEGNPDIRNVLVVAQRAKLGERLRDAA
RLWRRYDLACAALSSDRPRYYTWFAGRRRVGLVDPNRVGIGPRLLLNRIALNDHEHEHTVASTLALAPQIGIEPVPEVVA
PGLGDDPMRRARFDALLAASPAVAAGRPLVVLHPYPMFAYKQWRRDGWVELIDWLRGLGHAVALSGGPADHEREYAERVA
RDAGGDVLNLVGRLSFGESAELVRRAKLFIGPDTGATHVAAATGTPVIALFGPSDPVRWGPWPQRWQGGGKPWPLVGSAR
RGNVYLLQGEGSCVPCRQEGCERNVASYSDCLMQMSTARVATVAAQMLGLPAEAARAAPSTVIDTTGLVRPRA

Specific function: Catalyzes heptose transfer to the lipopolysaccharide core. It transfers a heptose, called heptose(III), to the heptose(II) of the inner core [H]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790062, Length=330, Percent_Identity=27.5757575757576, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI1790050, Length=301, Percent_Identity=26.9102990033223, Blast_Score=81, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201
- InterPro:   IPR011916 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 42859; Mature: 42728

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAALFPDHPPRSILVVATRRIGDVLLTTPIVRSLKAHWPDTPIDMLVFRGTEGVLEGNPD
CCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEECCCCCCCCCCC
IRNVLVVAQRAKLGERLRDAARLWRRYDLACAALSSDRPRYYTWFAGRRRVGLVDPNRVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEECCCCCCCC
IGPRLLLNRIALNDHEHEHTVASTLALAPQIGIEPVPEVVAPGLGDDPMRRARFDALLAA
CCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHC
SPAVAAGRPLVVLHPYPMFAYKQWRRDGWVELIDWLRGLGHAVALSGGPADHEREYAERV
CCCHHCCCCEEEECCCCHHHHHHHHHCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHH
ARDAGGDVLNLVGRLSFGESAELVRRAKLFIGPDTGATHVAAATGTPVIALFGPSDPVRW
HHHCCCHHHHHHHHCCCCCHHHHHHHHHEEECCCCCCCEEEEECCCCEEEEECCCCCCCC
GPWPQRWQGGGKPWPLVGSARRGNVYLLQGEGSCVPCRQEGCERNVASYSDCLMQMSTAR
CCCHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHHHH
VATVAAQMLGLPAEAARAAPSTVIDTTGLVRPRA
HHHHHHHHHCCCHHHHHCCCCCEECCCCCCCCCC
>Mature Secondary Structure 
AALFPDHPPRSILVVATRRIGDVLLTTPIVRSLKAHWPDTPIDMLVFRGTEGVLEGNPD
CCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEECCCCCCCCCCC
IRNVLVVAQRAKLGERLRDAARLWRRYDLACAALSSDRPRYYTWFAGRRRVGLVDPNRVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEECCCCCCCC
IGPRLLLNRIALNDHEHEHTVASTLALAPQIGIEPVPEVVAPGLGDDPMRRARFDALLAA
CCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHC
SPAVAAGRPLVVLHPYPMFAYKQWRRDGWVELIDWLRGLGHAVALSGGPADHEREYAERV
CCCHHCCCCEEEECCCCHHHHHHHHHCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHH
ARDAGGDVLNLVGRLSFGESAELVRRAKLFIGPDTGATHVAAATGTPVIALFGPSDPVRW
HHHCCCHHHHHHHHCCCCCHHHHHHHHHEEECCCCCCCEEEEECCCCEEEEECCCCCCCC
GPWPQRWQGGGKPWPLVGSARRGNVYLLQGEGSCVPCRQEGCERNVASYSDCLMQMSTAR
CCCHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHHHH
VATVAAQMLGLPAEAARAAPSTVIDTTGLVRPRA
HHHHHHHHHCCCHHHHHCCCCCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Transferring other glycosyl groups [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA