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The map label for this gene is acdA [H]

Identifier: 238028126

GI number: 238028126

Start: 2939633

End: 2940829

Strand: Reverse

Name: acdA [H]

Synonym: bglu_1g25770

Alternate gene names: 238028126

Gene position: 2940829-2939633 (Counterclockwise)

Preceding gene: 238028127

Following gene: 238028125

Centisome position: 75.28

GC content: 66.25

Gene sequence:

>1197_bases
ATGGATCTGGATTATTCCCCCGCCGACGACGCGTTTCGCGCCGACATTCGGGCGTGGCTCGAGGCCCATCTGCCTCGTTC
GCTGCGCGACAAGGTTCTCAACCACAAGCGACTCGACCGCGACGACTACCTCGGCTGGCATCGCACGCTTGCCGCGCGCG
GCTGGTCCGCGCCTGGCTGGCCCGCCGAATACGGCGGCCCCGGCTGGGACGCGACACGGCGCTACATCTGGGACGAGGAA
TGCGCGCGCGCCGGCACGCCGCCGCCGCTGACGTTCGGCGTCTCGATGGTGGGCCCGGTGCTGATCCGCTACGGCAACGA
CGCGCAGAAGCGCCACTGGTTGCCGCGCATTCTCGACGGCACCGACTGGTGGTGCCAGGGTTACTCCGAGCCGGGCTCCG
GCTCCGATCTCGCCTCGCTGCGCACGCGCGCCGAGCGGTGCGGCGATCACTACGTCGTGAACGGGCAGAAGACCTGGACC
ACGCTCGGCCAGTACGCCGACATGATGTTCTGCCTGGTGCGCACCGATCCCGCCGCGAAGAAGCAGGAGGGCATCTCGTT
CCTGCTGATCGACATGAAATCGCCCGGCGTCACGGTCAGGCCGATCATCACGCTCGACGAGGACCATGAGGTCAACGAGG
TGTTTTTCGAGGACGTGAAGGTGCCGGTGGAGAATCTCGTCGGCGACGAGCACCGCGGTTGGACCTACGCGAAGTATCTG
CTCGGTCACGAGCGCACCAGCATCGCGCGTGTCGGCAACTCGAAGCGCGAATTGGGATTCCTGAAGCGTCTTGCGGCCGG
CCAGCGACGCCACGGCCGCCCGCTGCTCGAAGATCCGGTATTCGCCTCACGCGTGGCCTCGCTCGAGATCGATCTGATGG
CGCTCGAGGTGACCGCGCTGCGCGTGATCGGCCAGGAGAGCCGCGGCCGTGGCCCAGGCCCCGAGGCATCGATGCTGAAG
ATCAAGGGCTCCGAGATCCAGCAGGCGCTGTCCGAGCTGATGGTCGATGCCATCGGGCCGCTCGCCGCGCCGTTCGATCC
CGCGTTTCTCGACGGCGAACGCGAGCATGCGAGCACCGGCAGCGACGACGCTGCGCCGCTCGCCGCCCAGTATTTCAACT
TTCGCAAGATGTCGATCTACGGCGGTTCCAACGAAATCCAGAAGAACATCATCGCGCAGATGATTCTTGGCCTTTGA

Upstream 100 bases:

>100_bases
CGTTGCCGGCCGCGCTGAAAGAGCCGCTGCAATGATCGAATCCTGATCGGCGCGCGTCTTTCTGGCAGGCCGCCGCGGTT
CGCGGCCAGGAGACATGCGC

Downstream 100 bases:

>100_bases
GGAGCGACGCATGGACTTCACCTTCAGCGAAGAGCAACAGCAGTTTGCCGATGCGCTGCGTCGCTATCTGGACGAGCGTT
ACGGGTTCGACGCGCGGCAG

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MDLDYSPADDAFRADIRAWLEAHLPRSLRDKVLNHKRLDRDDYLGWHRTLAARGWSAPGWPAEYGGPGWDATRRYIWDEE
CARAGTPPPLTFGVSMVGPVLIRYGNDAQKRHWLPRILDGTDWWCQGYSEPGSGSDLASLRTRAERCGDHYVVNGQKTWT
TLGQYADMMFCLVRTDPAAKKQEGISFLLIDMKSPGVTVRPIITLDEDHEVNEVFFEDVKVPVENLVGDEHRGWTYAKYL
LGHERTSIARVGNSKRELGFLKRLAAGQRRHGRPLLEDPVFASRVASLEIDLMALEVTALRVIGQESRGRGPGPEASMLK
IKGSEIQQALSELMVDAIGPLAAPFDPAFLDGEREHASTGSDDAAPLAAQYFNFRKMSIYGGSNEIQKNIIAQMILGL

Sequences:

>Translated_398_residues
MDLDYSPADDAFRADIRAWLEAHLPRSLRDKVLNHKRLDRDDYLGWHRTLAARGWSAPGWPAEYGGPGWDATRRYIWDEE
CARAGTPPPLTFGVSMVGPVLIRYGNDAQKRHWLPRILDGTDWWCQGYSEPGSGSDLASLRTRAERCGDHYVVNGQKTWT
TLGQYADMMFCLVRTDPAAKKQEGISFLLIDMKSPGVTVRPIITLDEDHEVNEVFFEDVKVPVENLVGDEHRGWTYAKYL
LGHERTSIARVGNSKRELGFLKRLAAGQRRHGRPLLEDPVFASRVASLEIDLMALEVTALRVIGQESRGRGPGPEASMLK
IKGSEIQQALSELMVDAIGPLAAPFDPAFLDGEREHASTGSDDAAPLAAQYFNFRKMSIYGGSNEIQKNIIAQMILGL
>Mature_398_residues
MDLDYSPADDAFRADIRAWLEAHLPRSLRDKVLNHKRLDRDDYLGWHRTLAARGWSAPGWPAEYGGPGWDATRRYIWDEE
CARAGTPPPLTFGVSMVGPVLIRYGNDAQKRHWLPRILDGTDWWCQGYSEPGSGSDLASLRTRAERCGDHYVVNGQKTWT
TLGQYADMMFCLVRTDPAAKKQEGISFLLIDMKSPGVTVRPIITLDEDHEVNEVFFEDVKVPVENLVGDEHRGWTYAKYL
LGHERTSIARVGNSKRELGFLKRLAAGQRRHGRPLLEDPVFASRVASLEIDLMALEVTALRVIGQESRGRGPGPEASMLK
IKGSEIQQALSELMVDAIGPLAAPFDPAFLDGEREHASTGSDDAAPLAAQYFNFRKMSIYGGSNEIQKNIIAQMILGL

Specific function: Involved in the degradation of long-chain fatty acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501857, Length=401, Percent_Identity=23.9401496259352, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI226958412, Length=260, Percent_Identity=29.2307692307692, Blast_Score=112, Evalue=5e-25,
Organism=Homo sapiens, GI226958414, Length=196, Percent_Identity=33.1632653061224, Blast_Score=112, Evalue=8e-25,
Organism=Homo sapiens, GI4557233, Length=347, Percent_Identity=27.0893371757925, Blast_Score=109, Evalue=4e-24,
Organism=Homo sapiens, GI4557231, Length=341, Percent_Identity=26.3929618768328, Blast_Score=109, Evalue=5e-24,
Organism=Homo sapiens, GI187960098, Length=341, Percent_Identity=26.3929618768328, Blast_Score=108, Evalue=6e-24,
Organism=Homo sapiens, GI211971008, Length=309, Percent_Identity=27.5080906148867, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI48976061, Length=309, Percent_Identity=27.5080906148867, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI4501859, Length=340, Percent_Identity=25.2941176470588, Blast_Score=96, Evalue=6e-20,
Organism=Homo sapiens, GI21361497, Length=298, Percent_Identity=27.8523489932886, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI4557235, Length=199, Percent_Identity=31.6582914572864, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI76496475, Length=199, Percent_Identity=31.6582914572864, Blast_Score=87, Evalue=4e-17,
Organism=Homo sapiens, GI7656849, Length=268, Percent_Identity=26.4925373134328, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI38505218, Length=314, Percent_Identity=24.5222929936306, Blast_Score=80, Evalue=4e-15,
Organism=Escherichia coli, GI87081958, Length=406, Percent_Identity=22.6600985221675, Blast_Score=85, Evalue=7e-18,
Organism=Escherichia coli, GI1786223, Length=330, Percent_Identity=23.3333333333333, Blast_Score=74, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17538396, Length=225, Percent_Identity=29.7777777777778, Blast_Score=108, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI17570075, Length=407, Percent_Identity=24.8157248157248, Blast_Score=107, Evalue=8e-24,
Organism=Caenorhabditis elegans, GI17569725, Length=376, Percent_Identity=24.7340425531915, Blast_Score=102, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI17506239, Length=346, Percent_Identity=26.3005780346821, Blast_Score=98, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI17508101, Length=380, Percent_Identity=25.7894736842105, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17551932, Length=212, Percent_Identity=31.1320754716981, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17534899, Length=289, Percent_Identity=25.6055363321799, Blast_Score=95, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI32563615, Length=197, Percent_Identity=31.4720812182741, Blast_Score=92, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI71985184, Length=172, Percent_Identity=34.3023255813954, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI71985192, Length=172, Percent_Identity=34.3023255813954, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17505929, Length=351, Percent_Identity=25.3561253561254, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71990804, Length=196, Percent_Identity=27.5510204081633, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17533517, Length=250, Percent_Identity=25.6, Blast_Score=76, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI71982178, Length=223, Percent_Identity=24.6636771300448, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17562446, Length=312, Percent_Identity=23.7179487179487, Blast_Score=69, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17534353, Length=310, Percent_Identity=21.2903225806452, Blast_Score=65, Evalue=7e-11,
Organism=Drosophila melanogaster, GI21356377, Length=403, Percent_Identity=26.7990074441687, Blast_Score=111, Evalue=8e-25,
Organism=Drosophila melanogaster, GI24660351, Length=345, Percent_Identity=26.9565217391304, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI21355753, Length=209, Percent_Identity=31.5789473684211, Blast_Score=99, Evalue=7e-21,
Organism=Drosophila melanogaster, GI281363737, Length=283, Percent_Identity=28.2685512367491, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24666513, Length=356, Percent_Identity=25.8426966292135, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24646207, Length=340, Percent_Identity=24.7058823529412, Blast_Score=81, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 44433; Mature: 44433

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLDYSPADDAFRADIRAWLEAHLPRSLRDKVLNHKRLDRDDYLGWHRTLAARGWSAPGW
CCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC
PAEYGGPGWDATRRYIWDEECARAGTPPPLTFGVSMVGPVLIRYGNDAQKRHWLPRILDG
CCCCCCCCHHHHHHHCCCHHHHCCCCCCCCEECHHHHHHHHEECCCCHHHHCCCHHHCCC
TDWWCQGYSEPGSGSDLASLRTRAERCGDHYVVNGQKTWTTLGQYADMMFCLVRTDPAAK
CCHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHEEECCCCHH
KQEGISFLLIDMKSPGVTVRPIITLDEDHEVNEVFFEDVKVPVENLVGDEHRGWTYAKYL
HHCCCEEEEEEECCCCEEEEEEEEECCCCCHHHHHHHHHCCCHHHHCCCCCCCHHHHHHH
LGHERTSIARVGNSKRELGFLKRLAAGQRRHGRPLLEDPVFASRVASLEIDLMALEVTAL
HHCCHHHHHHHCCCHHHHHHHHHHHHCHHHCCCCCCCCCHHHHHHHHHEEEEEHHHHHHH
RVIGQESRGRGPGPEASMLKIKGSEIQQALSELMVDAIGPLAAPFDPAFLDGEREHASTG
HHHCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCHHHCCCC
SDDAAPLAAQYFNFRKMSIYGGSNEIQKNIIAQMILGL
CCCCHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDLDYSPADDAFRADIRAWLEAHLPRSLRDKVLNHKRLDRDDYLGWHRTLAARGWSAPGW
CCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC
PAEYGGPGWDATRRYIWDEECARAGTPPPLTFGVSMVGPVLIRYGNDAQKRHWLPRILDG
CCCCCCCCHHHHHHHCCCHHHHCCCCCCCCEECHHHHHHHHEECCCCHHHHCCCHHHCCC
TDWWCQGYSEPGSGSDLASLRTRAERCGDHYVVNGQKTWTTLGQYADMMFCLVRTDPAAK
CCHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHEEECCCCHH
KQEGISFLLIDMKSPGVTVRPIITLDEDHEVNEVFFEDVKVPVENLVGDEHRGWTYAKYL
HHCCCEEEEEEECCCCEEEEEEEEECCCCCHHHHHHHHHCCCHHHHCCCCCCCHHHHHHH
LGHERTSIARVGNSKRELGFLKRLAAGQRRHGRPLLEDPVFASRVASLEIDLMALEVTAL
HHCCHHHHHHHCCCHHHHHHHHHHHHCHHHCCCCCCCCCHHHHHHHHHEEEEEHHHHHHH
RVIGQESRGRGPGPEASMLKIKGSEIQQALSELMVDAIGPLAAPFDPAFLDGEREHASTG
HHHCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCHHHCCCC
SDDAAPLAAQYFNFRKMSIYGGSNEIQKNIIAQMILGL
CCCCHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]