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The map label for this gene is yngJ [H]

Identifier: 238028125

GI number: 238028125

Start: 2938489

End: 2939622

Strand: Reverse

Name: yngJ [H]

Synonym: bglu_1g25760

Alternate gene names: 238028125

Gene position: 2939622-2938489 (Counterclockwise)

Preceding gene: 238028126

Following gene: 238028124

Centisome position: 75.25

GC content: 71.34

Gene sequence:

>1134_bases
ATGGACTTCACCTTCAGCGAAGAGCAACAGCAGTTTGCCGATGCGCTGCGTCGCTATCTGGACGAGCGTTACGGGTTCGA
CGCGCGGCAGGCGATCGTCGCTTCGGCGGCCGGTGTCTCGGCCGGGCAGTGGCGAGCGTTCGCCGAGTTGGGTCTGACCG
CGCTGCCGGTGCCCGAGGCCTGCGGCGGCCTCGGCGGCGGCACGGTCGACATGCTGGTGGCGATGCAGGCGCTCGGTGCG
GCGCTCGTGGTCGAGCCGTACTGGGCGACGGCGGTCGGCGTCGAGGCGCTGCGGATCGCCGCGAGCGGTCATGCCGCCGA
CGCCGCGCTGCTCGAACGCGCGGCCGCAGGCGATGCCGTGCTGGCCGTGGCGTTCGACGAGCCGGGCGCGCGCTATGAGC
TGGACACGATCGACACGCGCGCCGAGCCCGACGGAGACGGCTTTCGACTCGACGGCACCAAGGCGGTGGTCCGCCACGGC
GCGCAGGCGCACGCGTGGATCGTGCCGGCGAGGCAGCCCGACGGCACGATCGCGCTGTTCGTCGTCGAGCGCGGCGCGGC
CGGTGCCACCGCCGACGACTATCGGACCATCGACGGCCAGCGCGCGGCCACGCTGCGCTTCGCGGCCACGCCGGCGCGCC
GGATCGTGGACGGCACGCACGGCGCCGCCGCGCTCGAGCGGATCGCCGACTACGGCATCGTGCTGCTGTGCGCCGAAGCG
CTCGGCGCGCTCGATGCGCTGAACCGCGCCACCCTCGACTATACGAAGACGCGTGAGCAGTTCGGCATGCCGATCGCGCG
CTTCCAGGTGCTGCAGCATCGGATGGTCGACATGCTGATCCAGACCGAGCAGGCGCGTTCGCTGACCTATCTGGCCGCGG
TGCGCTACGCCGACGCCAACGCCGACCTCAGGCGGCGCGCCGTGTCGGCCGCGAAGGCGCGCATCGGTCAGGCCGCGCGT
TTCGTCGGCCAGCAGGCAATCCAGCTGCACGGCGGCATGGGCATGACGCAGGAAGTCGCGGCGGCGCATCTGTTCAAGCG
GCTCGCAATCATCGAGACGACGCTGGGCGATGTCGACCACCACCTCGCCCGGTTTGCCGCCTTGCCGTCCTTTTTCGAAT
ACGATGCGGTCTGA

Upstream 100 bases:

>100_bases
CAGTATTTCAACTTTCGCAAGATGTCGATCTACGGCGGTTCCAACGAAATCCAGAAGAACATCATCGCGCAGATGATTCT
TGGCCTTTGAGGAGCGACGC

Downstream 100 bases:

>100_bases
TGAGGCAGTTCCATCAACCCCACCGGATGCCAACAGGAGAGAGAAGCATGAGGATCGGTTACGAAGATCTGGAGGTCGGC
GCGCTGACCGAGGTCGGCCG

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MDFTFSEEQQQFADALRRYLDERYGFDARQAIVASAAGVSAGQWRAFAELGLTALPVPEACGGLGGGTVDMLVAMQALGA
ALVVEPYWATAVGVEALRIAASGHAADAALLERAAAGDAVLAVAFDEPGARYELDTIDTRAEPDGDGFRLDGTKAVVRHG
AQAHAWIVPARQPDGTIALFVVERGAAGATADDYRTIDGQRAATLRFAATPARRIVDGTHGAAALERIADYGIVLLCAEA
LGALDALNRATLDYTKTREQFGMPIARFQVLQHRMVDMLIQTEQARSLTYLAAVRYADANADLRRRAVSAAKARIGQAAR
FVGQQAIQLHGGMGMTQEVAAAHLFKRLAIIETTLGDVDHHLARFAALPSFFEYDAV

Sequences:

>Translated_377_residues
MDFTFSEEQQQFADALRRYLDERYGFDARQAIVASAAGVSAGQWRAFAELGLTALPVPEACGGLGGGTVDMLVAMQALGA
ALVVEPYWATAVGVEALRIAASGHAADAALLERAAAGDAVLAVAFDEPGARYELDTIDTRAEPDGDGFRLDGTKAVVRHG
AQAHAWIVPARQPDGTIALFVVERGAAGATADDYRTIDGQRAATLRFAATPARRIVDGTHGAAALERIADYGIVLLCAEA
LGALDALNRATLDYTKTREQFGMPIARFQVLQHRMVDMLIQTEQARSLTYLAAVRYADANADLRRRAVSAAKARIGQAAR
FVGQQAIQLHGGMGMTQEVAAAHLFKRLAIIETTLGDVDHHLARFAALPSFFEYDAV
>Mature_377_residues
MDFTFSEEQQQFADALRRYLDERYGFDARQAIVASAAGVSAGQWRAFAELGLTALPVPEACGGLGGGTVDMLVAMQALGA
ALVVEPYWATAVGVEALRIAASGHAADAALLERAAAGDAVLAVAFDEPGARYELDTIDTRAEPDGDGFRLDGTKAVVRHG
AQAHAWIVPARQPDGTIALFVVERGAAGATADDYRTIDGQRAATLRFAATPARRIVDGTHGAAALERIADYGIVLLCAEA
LGALDALNRATLDYTKTREQFGMPIARFQVLQHRMVDMLIQTEQARSLTYLAAVRYADANADLRRRAVSAAKARIGQAAR
FVGQQAIQLHGGMGMTQEVAAAHLFKRLAIIETTLGDVDHHLARFAALPSFFEYDAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=333, Percent_Identity=27.9279279279279, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI76496475, Length=383, Percent_Identity=24.0208877284595, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI4557235, Length=383, Percent_Identity=24.0208877284595, Blast_Score=86, Evalue=7e-17,
Organism=Homo sapiens, GI226958412, Length=303, Percent_Identity=25.0825082508251, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI187960098, Length=381, Percent_Identity=27.2965879265092, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI4557231, Length=381, Percent_Identity=27.2965879265092, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI4501857, Length=361, Percent_Identity=24.3767313019391, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI226958414, Length=264, Percent_Identity=25.3787878787879, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI21361497, Length=370, Percent_Identity=24.0540540540541, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI7656849, Length=310, Percent_Identity=26.7741935483871, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI4503943, Length=267, Percent_Identity=26.5917602996255, Blast_Score=65, Evalue=9e-11,
Organism=Escherichia coli, GI87081958, Length=359, Percent_Identity=21.7270194986072, Blast_Score=65, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17506239, Length=381, Percent_Identity=25.9842519685039, Blast_Score=92, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI71985184, Length=330, Percent_Identity=25.4545454545455, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17538396, Length=326, Percent_Identity=25.1533742331288, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17569725, Length=388, Percent_Identity=26.8041237113402, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17534899, Length=340, Percent_Identity=27.0588235294118, Blast_Score=75, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17508101, Length=336, Percent_Identity=24.702380952381, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71985192, Length=293, Percent_Identity=24.5733788395904, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI71990804, Length=268, Percent_Identity=27.2388059701493, Blast_Score=68, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17570075, Length=378, Percent_Identity=25.6613756613757, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21356377, Length=329, Percent_Identity=27.355623100304, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI21355753, Length=328, Percent_Identity=26.5243902439024, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24646207, Length=333, Percent_Identity=27.027027027027, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24660351, Length=382, Percent_Identity=26.1780104712042, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24666513, Length=337, Percent_Identity=24.0356083086053, Blast_Score=71, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 40225; Mature: 40225

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFTFSEEQQQFADALRRYLDERYGFDARQAIVASAAGVSAGQWRAFAELGLTALPVPEA
CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHH
CGGLGGGTVDMLVAMQALGAALVVEPYWATAVGVEALRIAASGHAADAALLERAAAGDAV
HCCCCCHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHEECCCCHHHHHHHHHHCCCCEE
LAVAFDEPGARYELDTIDTRAEPDGDGFRLDGTKAVVRHGAQAHAWIVPARQPDGTIALF
EEEEECCCCCEEEECCCCCCCCCCCCCEEECCHHHHHHCCCCCCEEEEECCCCCCCEEEE
VVERGAAGATADDYRTIDGQRAATLRFAATPARRIVDGTHGAAALERIADYGIVLLCAEA
EEECCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
LGALDALNRATLDYTKTREQFGMPIARFQVLQHRMVDMLIQTEQARSLTYLAAVRYADAN
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ADLRRRAVSAAKARIGQAARFVGQQAIQLHGGMGMTQEVAAAHLFKRLAIIETTLGDVDH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
HLARFAALPSFFEYDAV
HHHHHHHCCCHHHHCCC
>Mature Secondary Structure
MDFTFSEEQQQFADALRRYLDERYGFDARQAIVASAAGVSAGQWRAFAELGLTALPVPEA
CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHH
CGGLGGGTVDMLVAMQALGAALVVEPYWATAVGVEALRIAASGHAADAALLERAAAGDAV
HCCCCCHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHEECCCCHHHHHHHHHHCCCCEE
LAVAFDEPGARYELDTIDTRAEPDGDGFRLDGTKAVVRHGAQAHAWIVPARQPDGTIALF
EEEEECCCCCEEEECCCCCCCCCCCCCEEECCHHHHHHCCCCCCEEEEECCCCCCCEEEE
VVERGAAGATADDYRTIDGQRAATLRFAATPARRIVDGTHGAAALERIADYGIVLLCAEA
EEECCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
LGALDALNRATLDYTKTREQFGMPIARFQVLQHRMVDMLIQTEQARSLTYLAAVRYADAN
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ADLRRRAVSAAKARIGQAARFVGQQAIQLHGGMGMTQEVAAAHLFKRLAIIETTLGDVDH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
HLARFAALPSFFEYDAV
HHHHHHHCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]