| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027666
Identifier: 238027666
GI number: 238027666
Start: 2276023
End: 2277933
Strand: Reverse
Name: 238027666
Synonym: bglu_1g20870
Alternate gene names: NA
Gene position: 2277933-2276023 (Counterclockwise)
Preceding gene: 238027667
Following gene: 238027665
Centisome position: 58.31
GC content: 64.15
Gene sequence:
>1911_bases ATGACGAACAACACCACCGCAGCCGCGCTGACGGACGAGCAGCGTGCAGCAATCAACATGGCAATCAGCGTGCTGACGCC TCTCGCGATGGACGAGTACGGCGATGCACTTCGCGCCCTTCTCACCTCCCCGCGAGCAGCAGTGCCCGCACCGGAGGGGT GGAAGCTGGTTCCGATCGTACCGACGCGAGACATGCTTGAGTGCTTGTGGGACGGGCTTCCGAAAGGCACGTCGTTCCGT AACTGCACGCCGCTCGGCATCTACGCAGCCATGCTCGCCGCCTCTCCCGCCGCCCCGGTCGACGAGATTTCGGCCGGGAC GGAACCCAATCCCAGCAAGGAATCGGGCCAATCCGAGGCGGTCATTTCGGCCAGGGGATTTGACGCTCAGACTGTCGCCG CGCCGGTCAGATTGGCATCGATCCGCGATTTCGGACCTGTGCCATTGGGCGAAGGGCAAGATGCAACCAGCACTATCCAG CAAGCCTTAGACTGCCCGACTCGCGATTGGCCGGTGCCGGAAATAGCCGCTCAGGCTGTCGCCGCTGATGGGGCGGACAC GGACGAGCTGCAAGGAATCGTCGAAGCGTGCGAAGAGTTGGGCTGCCCGGACGGCATGACGCCCCGCCAGTTCATATCGG ATATCTGGTCGCTGCTGATCGCGTGGTATCAGGCGAGCTCTGAAGGCAAGATTGCCGTCAGCGATCCCGCTTATCACCTC GTCACCGCGACGGCCGCGCTGATGGGTGACGAGCGCGCAGCAGTATCGCCGGCCACGTCCGAGAGCAAATGCACGCGCTG CGGATCAAGCACGGCGCAGGCATGCAACGAACTGGGATGCTTCTACCTCGAATCTGGCGAAGGCGAGCCGGCCACGGCCG AGCCCGACGAGGTTCGAGCGCATGTCAAATGGCTGCACTCTTGCTTGCGAGATGCAGGCTATTGCATTGACGGCGGCAAG TGCCACCACGAATGCGGCAGCAAAGGGGATTGCTTCCGGCAGGCCGGATGCGTGCCGCTGACTGGTTCGCATCTCAGTGA CGATTGGACGCTCCCCGTTGCCAGTGAGCCGGCCACGTCCGACGAGCGGGCGGCGAGGCTTGACGACGCCGACATCGACG CGATCGCCGAATCGATGCCGGGCGGCCTCGGCAGCTTCATGAAGCAATGGGGCTGGCGGCAGTTCGCCCGCGCCGTGGAA GACGAGGTTGTGCTCAACGTTGCGCGCACATCGCAGGCCGCCGCACCTCAAGCGAACGAGGGCGAAGAGTCGGAGGATGC CTACGTGATCCGCCGTCTGAGCGAAACGCTTGCAGATGTGTGCGTGACTCTGCGCGGCGACGATCCCGTACATCCCGACG ATCCGCTCAACAAGATCGAACTGGTTAAACGACTCGCCGAAGTGCTCCGCATGGAAGTCGAGCTTTATCGCGCGCAGGCC TCCGCACCGGCCGAGGCGCGCGAGCCGAGCCCGACGGCCGGCATGAACCTTGGCGAGCGCATCAAGCACGTCGGCGGCAG GGAGAACGCAGCGGGCTACATCGAGTTCGGCAGCGTGGCCGCCGTAGGTGCGCTGATAAAGCAAGTCATCCGTGATTTGC CCCGAAGCGCCCCTGCTGATGCGGGAGAGGCGGTGGCGAGCATCGAGAATCCCCTGACGCCTTACGGGATGCTCGTGCGG GCGCTTCGGATCGTTGCCGGCACAACGCTGATGGACATGGCGACGGCTATGCGAGTTTCGCCGGCCTTCCTGTCATCGTT GGAATTCGGGCGTCGTCCGGTCACGTATGACAACGCCGTGTTCGCATCCGGCTTCTTCTCCGACAAGGGGATCGTCGATA CGTTGCCGGCGCTCGCCCATGCGGCCAAAGAGTCTCAGGGCGCGCAGGGTGGGAAGGGAGGCGAAGCGTGA
Upstream 100 bases:
>100_bases CCCGCCCGAGTGGCTAAGCTGCGCGCCCTCGGAAACGCGATCGACCCGCGCCCGGCGGCCGCATTCATTGAAACCTGCAT CGAACTGATCTGAGGACACC
Downstream 100 bases:
>100_bases AGAACCTTCTCATATTCGCCCTTCTGCTGTCGGCCATCGGCGGCTGCACCTATTGGGGTGTTTTCTCGGACGGGGCAAAG CGTGCCATGGAGCGCGAACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 636; Mature: 635
Protein sequence:
>636_residues MTNNTTAAALTDEQRAAINMAISVLTPLAMDEYGDALRALLTSPRAAVPAPEGWKLVPIVPTRDMLECLWDGLPKGTSFR NCTPLGIYAAMLAASPAAPVDEISAGTEPNPSKESGQSEAVISARGFDAQTVAAPVRLASIRDFGPVPLGEGQDATSTIQ QALDCPTRDWPVPEIAAQAVAADGADTDELQGIVEACEELGCPDGMTPRQFISDIWSLLIAWYQASSEGKIAVSDPAYHL VTATAALMGDERAAVSPATSESKCTRCGSSTAQACNELGCFYLESGEGEPATAEPDEVRAHVKWLHSCLRDAGYCIDGGK CHHECGSKGDCFRQAGCVPLTGSHLSDDWTLPVASEPATSDERAARLDDADIDAIAESMPGGLGSFMKQWGWRQFARAVE DEVVLNVARTSQAAAPQANEGEESEDAYVIRRLSETLADVCVTLRGDDPVHPDDPLNKIELVKRLAEVLRMEVELYRAQA SAPAEAREPSPTAGMNLGERIKHVGGRENAAGYIEFGSVAAVGALIKQVIRDLPRSAPADAGEAVASIENPLTPYGMLVR ALRIVAGTTLMDMATAMRVSPAFLSSLEFGRRPVTYDNAVFASGFFSDKGIVDTLPALAHAAKESQGAQGGKGGEA
Sequences:
>Translated_636_residues MTNNTTAAALTDEQRAAINMAISVLTPLAMDEYGDALRALLTSPRAAVPAPEGWKLVPIVPTRDMLECLWDGLPKGTSFR NCTPLGIYAAMLAASPAAPVDEISAGTEPNPSKESGQSEAVISARGFDAQTVAAPVRLASIRDFGPVPLGEGQDATSTIQ QALDCPTRDWPVPEIAAQAVAADGADTDELQGIVEACEELGCPDGMTPRQFISDIWSLLIAWYQASSEGKIAVSDPAYHL VTATAALMGDERAAVSPATSESKCTRCGSSTAQACNELGCFYLESGEGEPATAEPDEVRAHVKWLHSCLRDAGYCIDGGK CHHECGSKGDCFRQAGCVPLTGSHLSDDWTLPVASEPATSDERAARLDDADIDAIAESMPGGLGSFMKQWGWRQFARAVE DEVVLNVARTSQAAAPQANEGEESEDAYVIRRLSETLADVCVTLRGDDPVHPDDPLNKIELVKRLAEVLRMEVELYRAQA SAPAEAREPSPTAGMNLGERIKHVGGRENAAGYIEFGSVAAVGALIKQVIRDLPRSAPADAGEAVASIENPLTPYGMLVR ALRIVAGTTLMDMATAMRVSPAFLSSLEFGRRPVTYDNAVFASGFFSDKGIVDTLPALAHAAKESQGAQGGKGGEA >Mature_635_residues TNNTTAAALTDEQRAAINMAISVLTPLAMDEYGDALRALLTSPRAAVPAPEGWKLVPIVPTRDMLECLWDGLPKGTSFRN CTPLGIYAAMLAASPAAPVDEISAGTEPNPSKESGQSEAVISARGFDAQTVAAPVRLASIRDFGPVPLGEGQDATSTIQQ ALDCPTRDWPVPEIAAQAVAADGADTDELQGIVEACEELGCPDGMTPRQFISDIWSLLIAWYQASSEGKIAVSDPAYHLV TATAALMGDERAAVSPATSESKCTRCGSSTAQACNELGCFYLESGEGEPATAEPDEVRAHVKWLHSCLRDAGYCIDGGKC HHECGSKGDCFRQAGCVPLTGSHLSDDWTLPVASEPATSDERAARLDDADIDAIAESMPGGLGSFMKQWGWRQFARAVED EVVLNVARTSQAAAPQANEGEESEDAYVIRRLSETLADVCVTLRGDDPVHPDDPLNKIELVKRLAEVLRMEVELYRAQAS APAEAREPSPTAGMNLGERIKHVGGRENAAGYIEFGSVAAVGALIKQVIRDLPRSAPADAGEAVASIENPLTPYGMLVRA LRIVAGTTLMDMATAMRVSPAFLSSLEFGRRPVTYDNAVFASGFFSDKGIVDTLPALAHAAKESQGAQGGKGGEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67128; Mature: 66997
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNNTTAAALTDEQRAAINMAISVLTPLAMDEYGDALRALLTSPRAAVPAPEGWKLVPIV CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEC PTRDMLECLWDGLPKGTSFRNCTPLGIYAAMLAASPAAPVDEISAGTEPNPSKESGQSEA CCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCE VISARGFDAQTVAAPVRLASIRDFGPVPLGEGQDATSTIQQALDCPTRDWPVPEIAAQAV EEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHH AADGADTDELQGIVEACEELGCPDGMTPRQFISDIWSLLIAWYQASSEGKIAVSDPAYHL HCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHH VTATAALMGDERAAVSPATSESKCTRCGSSTAQACNELGCFYLESGEGEPATAEPDEVRA HHHHHHHHCCCHHCCCCCCCHHHHHHCCCHHHHHHHHCCCEEEECCCCCCCCCCHHHHHH HVKWLHSCLRDAGYCIDGGKCHHECGSKGDCFRQAGCVPLTGSHLSDDWTLPVASEPATS HHHHHHHHHHHCCCEECCCCHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC DERAARLDDADIDAIAESMPGGLGSFMKQWGWRQFARAVEDEVVLNVARTSQAAAPQANE HHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GEESEDAYVIRRLSETLADVCVTLRGDDPVHPDDPLNKIELVKRLAEVLRMEVELYRAQA CCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC SAPAEAREPSPTAGMNLGERIKHVGGRENAAGYIEFGSVAAVGALIKQVIRDLPRSAPAD CCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCC AGEAVASIENPLTPYGMLVRALRIVAGTTLMDMATAMRVSPAFLSSLEFGRRPVTYDNAV HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCH FASGFFSDKGIVDTLPALAHAAKESQGAQGGKGGEA HCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TNNTTAAALTDEQRAAINMAISVLTPLAMDEYGDALRALLTSPRAAVPAPEGWKLVPIV CCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEC PTRDMLECLWDGLPKGTSFRNCTPLGIYAAMLAASPAAPVDEISAGTEPNPSKESGQSEA CCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCE VISARGFDAQTVAAPVRLASIRDFGPVPLGEGQDATSTIQQALDCPTRDWPVPEIAAQAV EEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHH AADGADTDELQGIVEACEELGCPDGMTPRQFISDIWSLLIAWYQASSEGKIAVSDPAYHL HCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHH VTATAALMGDERAAVSPATSESKCTRCGSSTAQACNELGCFYLESGEGEPATAEPDEVRA HHHHHHHHCCCHHCCCCCCCHHHHHHCCCHHHHHHHHCCCEEEECCCCCCCCCCHHHHHH HVKWLHSCLRDAGYCIDGGKCHHECGSKGDCFRQAGCVPLTGSHLSDDWTLPVASEPATS HHHHHHHHHHHCCCEECCCCHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC DERAARLDDADIDAIAESMPGGLGSFMKQWGWRQFARAVEDEVVLNVARTSQAAAPQANE HHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GEESEDAYVIRRLSETLADVCVTLRGDDPVHPDDPLNKIELVKRLAEVLRMEVELYRAQA CCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC SAPAEAREPSPTAGMNLGERIKHVGGRENAAGYIEFGSVAAVGALIKQVIRDLPRSAPAD CCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCC AGEAVASIENPLTPYGMLVRALRIVAGTTLMDMATAMRVSPAFLSSLEFGRRPVTYDNAV HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCH FASGFFSDKGIVDTLPALAHAAKESQGAQGGKGGEA HCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA