| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027639
Identifier: 238027639
GI number: 238027639
Start: 2250976
End: 2252046
Strand: Reverse
Name: 238027639
Synonym: bglu_1g20600
Alternate gene names: NA
Gene position: 2252046-2250976 (Counterclockwise)
Preceding gene: 238027640
Following gene: 238027638
Centisome position: 57.65
GC content: 65.64
Gene sequence:
>1071_bases ATGAGTGAACCGACCAAGCCCGACGAGAAAAAGGCGCGGTTCCGGAAAATCCAGGTGCGCATGTGGGGCGACGAGAAATT CCGCGAGCTGACACCGATTCCGCCGTGCGGCGCGGGCCTCTGGGTCTACCTGCTGACCGGGCCTCACACCGGCCCGATCC CCGGCATTTTTCGGAGCGGCCGCGCGGCGATGGCTGAAGAGCTGGACTGGGATCAGGAAGCCTTCGACGAAGCCTTCCGG GAAGTCTTTCAGCAAGGCATGGCGAAAGCCGACTGGAAAGCCAAGGTCGTGTGGATCCCGAAGGCCATCGCCTGCAACCT GCCCGAGTCGCCGAACGTGGTGAAGTCGTGGGGCTCGGAGTGGGAGTTGATCCCCGAATGCGACTTGAAACGCGAGGCAT ACGAATCGCTGAGAGCCAATATCTGCGGGCGTGGAGAGGCTTTCGCCAAGGCTTTCCATGAGACTTTCGACAAGCCATCG CCTAAGCCTTCCGGAAAGCCTTCCCCGAAGGCTATCGGGAATCAGGAGCAGGAGCAGGAGCAGGAGAAAAAGACGGGGGC TAACGCCCCTGTGCCCAGCGCCGCTGACGCGACGCCGGCCACCCCGGTCGCTGCCGAGCCAGCCGGACCGGCCGGTGCTG CCGAACCTGATGGCCCCAACAGGGATCTGCTCGGCGATGGCGACAGCGACGCTGACGCTGGCGGCAAGGGGGCACGTCGC AAGCCGGCGGAACTGCCGTGCCCCGTCGAGCGGATCGTCGAGGCGTATCACGAGCTGATGCCGCTGAATCCCAGGGTGCG GCTGCTCAACGCCAAGCGGCGCCGGGCGATCGCCGCGCGCTGGCGCGAGGCCGCCACGCTCACCTGCAAGCCGTTCGGCT ACTCGACCGTCGAGGCGGGCATGCAGGCCTGGTGCCGGTTCTTCCGCGTTTGCGCCGATTCGGACTTCCTGACCGGGAAA GCCAAGCCCAGGCCCGGGCAGCCGCCGTTCCTCGCCGACATCGATTTCCTGATCTCGCCCGACGGCTTCACGAAGTGCCT CGAGGACAAATACCACCGGGAGGCCTCGTGA
Upstream 100 bases:
>100_bases CGAATTTGCGACGCTGAATCGCTGCCTGTCGCGCGCTGGTATGCCGGCGACGCGCTGGCGCTGCTGCGCGCCTTCAGCAT GGAAGTCAGGAATCAAAGTC
Downstream 100 bases:
>100_bases GCCTGGTCATCGCACCGATATCGTTCGACGAGGCAAACGCCTTCGTCGCCACCCATCACCGACACCACCGGCCGGTGATC GGCCACAAGTTCAGCATCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MSEPTKPDEKKARFRKIQVRMWGDEKFRELTPIPPCGAGLWVYLLTGPHTGPIPGIFRSGRAAMAEELDWDQEAFDEAFR EVFQQGMAKADWKAKVVWIPKAIACNLPESPNVVKSWGSEWELIPECDLKREAYESLRANICGRGEAFAKAFHETFDKPS PKPSGKPSPKAIGNQEQEQEQEKKTGANAPVPSAADATPATPVAAEPAGPAGAAEPDGPNRDLLGDGDSDADAGGKGARR KPAELPCPVERIVEAYHELMPLNPRVRLLNAKRRRAIAARWREAATLTCKPFGYSTVEAGMQAWCRFFRVCADSDFLTGK AKPRPGQPPFLADIDFLISPDGFTKCLEDKYHREAS
Sequences:
>Translated_356_residues MSEPTKPDEKKARFRKIQVRMWGDEKFRELTPIPPCGAGLWVYLLTGPHTGPIPGIFRSGRAAMAEELDWDQEAFDEAFR EVFQQGMAKADWKAKVVWIPKAIACNLPESPNVVKSWGSEWELIPECDLKREAYESLRANICGRGEAFAKAFHETFDKPS PKPSGKPSPKAIGNQEQEQEQEKKTGANAPVPSAADATPATPVAAEPAGPAGAAEPDGPNRDLLGDGDSDADAGGKGARR KPAELPCPVERIVEAYHELMPLNPRVRLLNAKRRRAIAARWREAATLTCKPFGYSTVEAGMQAWCRFFRVCADSDFLTGK AKPRPGQPPFLADIDFLISPDGFTKCLEDKYHREAS >Mature_355_residues SEPTKPDEKKARFRKIQVRMWGDEKFRELTPIPPCGAGLWVYLLTGPHTGPIPGIFRSGRAAMAEELDWDQEAFDEAFRE VFQQGMAKADWKAKVVWIPKAIACNLPESPNVVKSWGSEWELIPECDLKREAYESLRANICGRGEAFAKAFHETFDKPSP KPSGKPSPKAIGNQEQEQEQEKKTGANAPVPSAADATPATPVAAEPAGPAGAAEPDGPNRDLLGDGDSDADAGGKGARRK PAELPCPVERIVEAYHELMPLNPRVRLLNAKRRRAIAARWREAATLTCKPFGYSTVEAGMQAWCRFFRVCADSDFLTGKA KPRPGQPPFLADIDFLISPDGFTKCLEDKYHREAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39213; Mature: 39081
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPTKPDEKKARFRKIQVRMWGDEKFRELTPIPPCGAGLWVYLLTGPHTGPIPGIFRSG CCCCCCCHHHHHHHHEEEEEECCCHHHHHCCCCCCCCCCEEEEEEECCCCCCCCHHHHCC RAAMAEELDWDQEAFDEAFREVFQQGMAKADWKAKVVWIPKAIACNLPESPNVVKSWGSE HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHCCCCCCCCHHHHHCCCC WELIPECDLKREAYESLRANICGRGEAFAKAFHETFDKPSPKPSGKPSPKAIGNQEQEQE CCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCHHHHH QEKKTGANAPVPSAADATPATPVAAEPAGPAGAAEPDGPNRDLLGDGDSDADAGGKGARR HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KPAELPCPVERIVEAYHELMPLNPRVRLLNAKRRRAIAARWREAATLTCKPFGYSTVEAG CCCCCCCCHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHH MQAWCRFFRVCADSDFLTGKAKPRPGQPPFLADIDFLISPDGFTKCLEDKYHREAS HHHHHHHHHHHCCCCEECCCCCCCCCCCCCEECCCEEECCCHHHHHHHHHHHCCCC >Mature Secondary Structure SEPTKPDEKKARFRKIQVRMWGDEKFRELTPIPPCGAGLWVYLLTGPHTGPIPGIFRSG CCCCCCHHHHHHHHEEEEEECCCHHHHHCCCCCCCCCCEEEEEEECCCCCCCCHHHHCC RAAMAEELDWDQEAFDEAFREVFQQGMAKADWKAKVVWIPKAIACNLPESPNVVKSWGSE HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHCCCCCCCCHHHHHCCCC WELIPECDLKREAYESLRANICGRGEAFAKAFHETFDKPSPKPSGKPSPKAIGNQEQEQE CCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCHHHHH QEKKTGANAPVPSAADATPATPVAAEPAGPAGAAEPDGPNRDLLGDGDSDADAGGKGARR HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KPAELPCPVERIVEAYHELMPLNPRVRLLNAKRRRAIAARWREAATLTCKPFGYSTVEAG CCCCCCCCHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHH MQAWCRFFRVCADSDFLTGKAKPRPGQPPFLADIDFLISPDGFTKCLEDKYHREAS HHHHHHHHHHHCCCCEECCCCCCCCCCCCCEECCCEEECCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA