| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027622
Identifier: 238027622
GI number: 238027622
Start: 2233401
End: 2234339
Strand: Reverse
Name: 238027622
Synonym: bglu_1g20430
Alternate gene names: NA
Gene position: 2234339-2233401 (Counterclockwise)
Preceding gene: 238027623
Following gene: 238027621
Centisome position: 57.2
GC content: 66.77
Gene sequence:
>939_bases ATGCCGTCTTCCTACCTCTCGGATGCCGATTACACGACCTACGGCCTTCCCGCGTCGACGACGGCCAACCAGGTGACGCA GGCCTCGACCATCATCGATCTGTACCTGAAGCGCCCGGACGGCCTCGTGTGGATGCCCGACGGCACTGGCGCGCCGGGGT GGATGGCGGCGATGTCGCCGACGATCACCTACCAGGCGGCCGGCCCGATCCCGGCGGGGCAGAACGTGCAAGTCGAGATA ACGGGTGGCGTGGCCGCGCTGCAGGTGGGTGACGTGGTGATTCTGGACCGCGAGAACAGTCAACTGGCCGAGCCGGTGGC GATCGTCTCCTTCGGCGACGGGCTGCAGTCGATCGCCGGCGTGAAGCCGCCCGTGACCGTGATCCTCCAGAACGTGGTGT TCGACCACCCGGGCCCGTGCACGCTCGATGCCGGCATGGTCGTGAAGCAGCACAAGTACCTGCCGGAGGGCCGGCCGCTC ACGAACTTGGCTTTCACCCCAATCGCCCGACTGCTGGCCGGCCAAGGACGGTACGCCTACGGGCGGCGCGGTGCATCCTC GCGATACCAGGTGGACGAGTTCAACCTCATAGCGTCGCTGTCGCACTTCGGCGGCCCGCCGGTGTGGGAGTTCTTCCCGA TGGTGAACACCGGCGTGGACTTCGAGACGGGGCAGGTCTGGGTGCCGGCCGGCGTGATGCTGGCGTACTACAGCGAGGTC AACCTCTGGTACGTCGCCGGCTTCCCGGCGTCCGGCCTGCCGCCGGCGGTGAAGATGGCGTGCGCCAACATCATCCAGGC GAAGGCGAATTCGATGCAGCTCGGCGCGACGAAGAAGTACCAGGCTGGCGACACTTCGCTCGAGCGGTTCGCGGCGACGC TGATCGATGACGACACGAAGGCGATGCTGGCTCCCTACATGGCGAAGGCCTGGTCATGA
Upstream 100 bases:
>100_bases GACGGCCTCCCGTTCGCCAGCGTGCAGGTCACGGTGACGAACTCCAGCGGCTCGGCCGCGACGCTCTCCGCAGTCCAAGG GCTTTTCCAGGCTTCCTGAC
Downstream 100 bases:
>100_bases GCTTCATGTACCCGAGAACCATCTCGATCAGCCGGCAGGCGGTCTCGACGGCCGGCGGCCTGAAGCCCTACAGTGGCGCC GATCCGGTGGCTGAGCAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MPSSYLSDADYTTYGLPASTTANQVTQASTIIDLYLKRPDGLVWMPDGTGAPGWMAAMSPTITYQAAGPIPAGQNVQVEI TGGVAALQVGDVVILDRENSQLAEPVAIVSFGDGLQSIAGVKPPVTVILQNVVFDHPGPCTLDAGMVVKQHKYLPEGRPL TNLAFTPIARLLAGQGRYAYGRRGASSRYQVDEFNLIASLSHFGGPPVWEFFPMVNTGVDFETGQVWVPAGVMLAYYSEV NLWYVAGFPASGLPPAVKMACANIIQAKANSMQLGATKKYQAGDTSLERFAATLIDDDTKAMLAPYMAKAWS
Sequences:
>Translated_312_residues MPSSYLSDADYTTYGLPASTTANQVTQASTIIDLYLKRPDGLVWMPDGTGAPGWMAAMSPTITYQAAGPIPAGQNVQVEI TGGVAALQVGDVVILDRENSQLAEPVAIVSFGDGLQSIAGVKPPVTVILQNVVFDHPGPCTLDAGMVVKQHKYLPEGRPL TNLAFTPIARLLAGQGRYAYGRRGASSRYQVDEFNLIASLSHFGGPPVWEFFPMVNTGVDFETGQVWVPAGVMLAYYSEV NLWYVAGFPASGLPPAVKMACANIIQAKANSMQLGATKKYQAGDTSLERFAATLIDDDTKAMLAPYMAKAWS >Mature_311_residues PSSYLSDADYTTYGLPASTTANQVTQASTIIDLYLKRPDGLVWMPDGTGAPGWMAAMSPTITYQAAGPIPAGQNVQVEIT GGVAALQVGDVVILDRENSQLAEPVAIVSFGDGLQSIAGVKPPVTVILQNVVFDHPGPCTLDAGMVVKQHKYLPEGRPLT NLAFTPIARLLAGQGRYAYGRRGASSRYQVDEFNLIASLSHFGGPPVWEFFPMVNTGVDFETGQVWVPAGVMLAYYSEVN LWYVAGFPASGLPPAVKMACANIIQAKANSMQLGATKKYQAGDTSLERFAATLIDDDTKAMLAPYMAKAWS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33271; Mature: 33140
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSSYLSDADYTTYGLPASTTANQVTQASTIIDLYLKRPDGLVWMPDGTGAPGWMAAMSP CCCCCCCCCCCEEECCCCCCCHHHHHHHHEEEEEEEECCCCEEECCCCCCCCCHHHHCCC TITYQAAGPIPAGQNVQVEITGGVAALQVGDVVILDRENSQLAEPVAIVSFGDGLQSIAG EEEEEECCCCCCCCCEEEEEECCEEEEEECCEEEEECCCCCCCCCEEEEEECCCHHHHHC VKPPVTVILQNVVFDHPGPCTLDAGMVVKQHKYLPEGRPLTNLAFTPIARLLAGQGRYAY CCCHHHHHHHHHHHCCCCCCEECCCCEEHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEE GRRGASSRYQVDEFNLIASLSHFGGPPVWEFFPMVNTGVDFETGQVWVPAGVMLAYYSEV CCCCCCCCEECHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEECCCEEEEEEECC NLWYVAGFPASGLPPAVKMACANIIQAKANSMQLGATKKYQAGDTSLERFAATLIDDDTK EEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCHH AMLAPYMAKAWS HHHHHHHHHHCC >Mature Secondary Structure PSSYLSDADYTTYGLPASTTANQVTQASTIIDLYLKRPDGLVWMPDGTGAPGWMAAMSP CCCCCCCCCCEEECCCCCCCHHHHHHHHEEEEEEEECCCCEEECCCCCCCCCHHHHCCC TITYQAAGPIPAGQNVQVEITGGVAALQVGDVVILDRENSQLAEPVAIVSFGDGLQSIAG EEEEEECCCCCCCCCEEEEEECCEEEEEECCEEEEECCCCCCCCCEEEEEECCCHHHHHC VKPPVTVILQNVVFDHPGPCTLDAGMVVKQHKYLPEGRPLTNLAFTPIARLLAGQGRYAY CCCHHHHHHHHHHHCCCCCCEECCCCEEHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEE GRRGASSRYQVDEFNLIASLSHFGGPPVWEFFPMVNTGVDFETGQVWVPAGVMLAYYSEV CCCCCCCCEECHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEECCCEEEEEEECC NLWYVAGFPASGLPPAVKMACANIIQAKANSMQLGATKKYQAGDTSLERFAATLIDDDTK EEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCHH AMLAPYMAKAWS HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA