Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is 238027561
Identifier: 238027561
GI number: 238027561
Start: 2164269
End: 2165516
Strand: Reverse
Name: 238027561
Synonym: bglu_1g19790
Alternate gene names: NA
Gene position: 2165516-2164269 (Counterclockwise)
Preceding gene: 238027562
Following gene: 238027560
Centisome position: 55.43
GC content: 72.28
Gene sequence:
>1248_bases ATGAACGCGAGAACTCAATCATTGGCTGAGCCCGCCGTCACCGATCATTTCATCTGCGCCTCGCCGCGTGTCGAACGCGT GCGCTGGCTTGCGCAGACGCTCGTCGCGAGCGGCGCGGTCGAGGCCTCGCCGCTCGATCCGGCGGTGCTGGTGCAGCGTG TCGGCGGCCTCAATCCGACGCTGGTGTTCATCGATTTCGCCGGCGAGCAGGCGGGCGCGAGCGCGGCGGTGTCGGCGCTG CGCACTGCCTACCCGGGCCTGCCGGTGGTCGCGCTGGGCACGCTCGCCGAGCCCGAGAGCGCGCTCTCGGCGCTGCGCGC GGGGGTGCGTGACTTCGTCGATTTCTCCGCGCCGGCCGAGGAGGCGCTGCGCATCACGCGCGGCCTGCTCGACAACCTCG GCGAGCCCACCAGCCGCCACGGCAAGGTGCTCGCGCTGCTCGGCGCGCGCGCCGGGATGGGCGTGAGCACGCTCGCCGCC AATCTCTCGGTGCTGCTGCAGCGCAAGGTGGCCGCGCAAAGCCGCCGCACCGCGCTGGTCGATCTCGGCCTGCCGGCCGG CGACAGCGCGCTGTTCCTCAACACGCGCTGCGAGCTGCACTTCGTCGAGGCGGTGCGCAACCTGCGCCGCTTCGACCGTA CCTTCGTGAACACCGCGTTCGCGCATCACGCGAGCGGCGTGGCGCTGACCACGCTGCCGCCGAACCTGGCCGACCTGCGC GAAGTGTCGGCGGCGGCCTGCGCGGGCCTCTTCAACCGGCTGCGCGCGTTCGTCGACCAGCAGATCGTCGACCTGGGCGG CTTCACGAACCGCGAATTCATCGCGCAGATCGTGGCGCTCGGCGACGAGACCTGGCTGGTCTGCGATCAGGGCGTGGCCT CGGTGGTCTCGGCCGTGGAATTGCTCGACGAACTGCGCGAGAAGGGCGTGAGCCTCGCGCGCGTGCGGCTCGTGGTCAAC CAGTACGACGCGGCGCTCGGCCTGCTGCCCGCCCAGATCGCCGAGCGGCTCGAGCTGCCGCTCGTGGCGACGCTGCCGGC GCGGCGCGTGCCGATCGGCCATGCGGCCAACCAGGGCCGCCTGATCGTCGAGGCGGCCGAGCGCGACCCCTACGTGAAGG CGCTCGATGCGCTGGTCGAACGGCTCACGGCCGCTGCGGCGCCCGAGCCGGCGCCGCCGGTGCCGGCCGCCGGCAGCGGC CTGTCGGCGCTCAAGCGGTTCATCCATTCCACCACGAAGCGATCGTAA
Upstream 100 bases:
>100_bases TGCGGCCCCGGGGTTCTCGAAATGAGCGCGCCGGCGCAACCGAGCGTGCACGGGCGGCCCTGGCCGGCCCGTGCACGCGG CACAACGGGGAATGTTCAAC
Downstream 100 bases:
>100_bases GCGATGGCACACGACGACATCCAATTCGCCGACGGCGCAGCGCCGTTCTCGCACTCGCAGCAGTTCCACGACATCAAGGA CGCTGCGCACGAGCATCTGC
Product: response regulator receiver protein
Products: NA
Alternate protein names: Flp Pilus Assembly Protein ATPase CpaE-Like Protein; Pilus Assembly Protein CpaE; Response Regulator Receiver Domain-Containing Protein; Flp Pilus Assembly Protein ATPase CpaE-Like; Pilus Assembly Protein; Flp Pilus Assembly Protein ATPase; Response Receiver Involved In Pilum Assembly; Response Regulator; Flp Pilus Assembly ATPase; Pilus Assembly ATPase CpaE; Flp Pilus Assembly Protein CpaE; Flp Pilus Assembly Protein ATPase CpaE; Flp Pilus Assembly Response Receiver ATPase CpaE; Flp Pilus Assembly ATPase CpaE; Response Regulator Receiver Domain Protein; Two-Component Response Regulator; Fimbriae Assembly Protein; Septum Site-Determining Protein; Chromosome Partitioning ATPase; Flp Pilus Assembly Protein; Type II Secretion System Protein; Cobyrinic Acid Ac-Diamide Synthase; Pilus Assembly Protein CpaE-Like Protein; Pilus Assembly Protein CpaE-Like
Number of amino acids: Translated: 415; Mature: 415
Protein sequence:
>415_residues MNARTQSLAEPAVTDHFICASPRVERVRWLAQTLVASGAVEASPLDPAVLVQRVGGLNPTLVFIDFAGEQAGASAAVSAL RTAYPGLPVVALGTLAEPESALSALRAGVRDFVDFSAPAEEALRITRGLLDNLGEPTSRHGKVLALLGARAGMGVSTLAA NLSVLLQRKVAAQSRRTALVDLGLPAGDSALFLNTRCELHFVEAVRNLRRFDRTFVNTAFAHHASGVALTTLPPNLADLR EVSAAACAGLFNRLRAFVDQQIVDLGGFTNREFIAQIVALGDETWLVCDQGVASVVSAVELLDELREKGVSLARVRLVVN QYDAALGLLPAQIAERLELPLVATLPARRVPIGHAANQGRLIVEAAERDPYVKALDALVERLTAAAAPEPAPPVPAAGSG LSALKRFIHSTTKRS
Sequences:
>Translated_415_residues MNARTQSLAEPAVTDHFICASPRVERVRWLAQTLVASGAVEASPLDPAVLVQRVGGLNPTLVFIDFAGEQAGASAAVSAL RTAYPGLPVVALGTLAEPESALSALRAGVRDFVDFSAPAEEALRITRGLLDNLGEPTSRHGKVLALLGARAGMGVSTLAA NLSVLLQRKVAAQSRRTALVDLGLPAGDSALFLNTRCELHFVEAVRNLRRFDRTFVNTAFAHHASGVALTTLPPNLADLR EVSAAACAGLFNRLRAFVDQQIVDLGGFTNREFIAQIVALGDETWLVCDQGVASVVSAVELLDELREKGVSLARVRLVVN QYDAALGLLPAQIAERLELPLVATLPARRVPIGHAANQGRLIVEAAERDPYVKALDALVERLTAAAAPEPAPPVPAAGSG LSALKRFIHSTTKRS >Mature_415_residues MNARTQSLAEPAVTDHFICASPRVERVRWLAQTLVASGAVEASPLDPAVLVQRVGGLNPTLVFIDFAGEQAGASAAVSAL RTAYPGLPVVALGTLAEPESALSALRAGVRDFVDFSAPAEEALRITRGLLDNLGEPTSRHGKVLALLGARAGMGVSTLAA NLSVLLQRKVAAQSRRTALVDLGLPAGDSALFLNTRCELHFVEAVRNLRRFDRTFVNTAFAHHASGVALTTLPPNLADLR EVSAAACAGLFNRLRAFVDQQIVDLGGFTNREFIAQIVALGDETWLVCDQGVASVVSAVELLDELREKGVSLARVRLVVN QYDAALGLLPAQIAERLELPLVATLPARRVPIGHAANQGRLIVEAAERDPYVKALDALVERLTAAAAPEPAPPVPAAGSG LSALKRFIHSTTKRS
Specific function: Unknown
COG id: COG4963
COG function: function code U; Flp pilus assembly protein, ATPase CpaE
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43826; Mature: 43826
Theoretical pI: Translated: 7.59; Mature: 7.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNARTQSLAEPAVTDHFICASPRVERVRWLAQTLVASGAVEASPLDPAVLVQRVGGLNPT CCCCHHHHCCCCHHCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCE LVFIDFAGEQAGASAAVSALRTAYPGLPVVALGTLAEPESALSALRAGVRDFVDFSAPAE EEEEEECCCCCCHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCHH EALRITRGLLDNLGEPTSRHGKVLALLGARAGMGVSTLAANLSVLLQRKVAAQSRRTALV HHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEE DLGLPAGDSALFLNTRCELHFVEAVRNLRRFDRTFVNTAFAHHASGVALTTLPPNLADLR EECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHH EVSAAACAGLFNRLRAFVDQQIVDLGGFTNREFIAQIVALGDETWLVCDQGVASVVSAVE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECHHHHHHHHHHH LLDELREKGVSLARVRLVVNQYDAALGLLPAQIAERLELPLVATLPARRVPIGHAANQGR HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCE LIVEAAERDPYVKALDALVERLTAAAAPEPAPPVPAAGSGLSALKRFIHSTTKRS EEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MNARTQSLAEPAVTDHFICASPRVERVRWLAQTLVASGAVEASPLDPAVLVQRVGGLNPT CCCCHHHHCCCCHHCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCE LVFIDFAGEQAGASAAVSALRTAYPGLPVVALGTLAEPESALSALRAGVRDFVDFSAPAE EEEEEECCCCCCHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCHH EALRITRGLLDNLGEPTSRHGKVLALLGARAGMGVSTLAANLSVLLQRKVAAQSRRTALV HHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEE DLGLPAGDSALFLNTRCELHFVEAVRNLRRFDRTFVNTAFAHHASGVALTTLPPNLADLR EECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHH EVSAAACAGLFNRLRAFVDQQIVDLGGFTNREFIAQIVALGDETWLVCDQGVASVVSAVE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECHHHHHHHHHHH LLDELREKGVSLARVRLVVNQYDAALGLLPAQIAERLELPLVATLPARRVPIGHAANQGR HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCE LIVEAAERDPYVKALDALVERLTAAAAPEPAPPVPAAGSGLSALKRFIHSTTKRS EEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA