Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is 238027505
Identifier: 238027505
GI number: 238027505
Start: 2101659
End: 2101997
Strand: Reverse
Name: 238027505
Synonym: bglu_1g19190
Alternate gene names: NA
Gene position: 2101997-2101659 (Counterclockwise)
Preceding gene: 238027506
Following gene: 238027504
Centisome position: 53.81
GC content: 59.0
Gene sequence:
>339_bases ATGTTTGTGTTCGATCCCACTCGTCTTGATCTGGCAGCCGAATTTCGCAGGCAACCGTACGGCCGCCACAGCGCAGATCT GCAATATTTGTTGAATTTCATGAGGCGCCCGACGAACGAGGCATTTCATGTCTTGCTGATCGAGCGGCCTGGCATGTGCT GGCGACTTGCAACAATGCGGCCCGGCGCCCGACAGCCGCCGGAGCCGACGGAATACACGTTCGATAACCTGGAAGAAGCG GAATGGCACGTTTTCACACTGCGTTGGGCTCGGCTGGTCGGACTTGGCGCGATGCCGCCCGGTTGGCCGGCTGGTGCTGA CGCAGATTCACCGGAATAA
Upstream 100 bases:
>100_bases TCCGCCATTGGCTCGAGTACGGTGTTCGCTCGCCGATGGACCCCGCTCGATAGTCGTGGCGGACCGACCGTTTGAATGCA ACGGAGAAGATGGTGAACCT
Downstream 100 bases:
>100_bases AGGCGAACTCCACCGCCGCCTGCGTGGGATAAACCGTTGACGTGGTACGGAGGATTGAATGCAAGCAAGGCGAGTGGTAT TCTCTGCGCCCGGGCGGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MFVFDPTRLDLAAEFRRQPYGRHSADLQYLLNFMRRPTNEAFHVLLIERPGMCWRLATMRPGARQPPEPTEYTFDNLEEA EWHVFTLRWARLVGLGAMPPGWPAGADADSPE
Sequences:
>Translated_112_residues MFVFDPTRLDLAAEFRRQPYGRHSADLQYLLNFMRRPTNEAFHVLLIERPGMCWRLATMRPGARQPPEPTEYTFDNLEEA EWHVFTLRWARLVGLGAMPPGWPAGADADSPE >Mature_112_residues MFVFDPTRLDLAAEFRRQPYGRHSADLQYLLNFMRRPTNEAFHVLLIERPGMCWRLATMRPGARQPPEPTEYTFDNLEEA EWHVFTLRWARLVGLGAMPPGWPAGADADSPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12973; Mature: 12973
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVFDPTRLDLAAEFRRQPYGRHSADLQYLLNFMRRPTNEAFHVLLIERPGMCWRLATMR CCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCEEEEECCC PGARQPPEPTEYTFDNLEEAEWHVFTLRWARLVGLGAMPPGWPAGADADSPE CCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MFVFDPTRLDLAAEFRRQPYGRHSADLQYLLNFMRRPTNEAFHVLLIERPGMCWRLATMR CCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCEEEEECCC PGARQPPEPTEYTFDNLEEAEWHVFTLRWARLVGLGAMPPGWPAGADADSPE CCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA