| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is kgtP [H]
Identifier: 238027457
GI number: 238027457
Start: 2038636
End: 2039940
Strand: Reverse
Name: kgtP [H]
Synonym: bglu_1g18600
Alternate gene names: 238027457
Gene position: 2039940-2038636 (Counterclockwise)
Preceding gene: 238027458
Following gene: 238027454
Centisome position: 52.22
GC content: 67.51
Gene sequence:
>1305_bases ATGACCGATCTCACCGATCCGGCCCACCTGGCCGCCAACGACACCCGCCGACGCGTCTTCGCGATCGTCGGCGCCTCGTC GGGCAATCTCGTCGAATGGTTCGACTTCTACATCTATTCGTTCTGCTCGCTCTACTTCGCGCACGCGTTCTTTCCGAGCG GCAATCCCACCACGCAGCTGCTCAACACCGCCGGCGTGTTCGCGGCCGGCTTCCTGATGCGGCCGATCGGCGGCTGGCTG TTCGGCCGCATCGCCGACCGGCGCGGCCGGCGCACCGCGATGATGATCTCGGTGCTGATGATGTGCGGCGGCTCGCTGGT GATCGCGGCGCTGCCCACCTACGACCAGATCGGCGCGCTCGCGCCGGTGATGCTGCTGGTGGCGCGGCTGTTGCAGGGGC TGTCGGTGGGCGGCGAGTACGGCACCAGCGCGACCTACATGAGCGAGGTCGCGCTGAAGGGCCGGCGCGGCTTCTTCGCC TCGTTCCAGTACGTGACGCTGATCGGCGGCCAGCTCTGCGCGCTGCTGGTGCTGGTGATCCTGCAGCAGTTCCTCACCAC CGAGGAACTGCGCGCCTGGGGCTGGCGGATTCCGTTCCTGGTCGGCGCGCTGGCCGCGCTGGTGTCGCTCTACCTGCGCA AGTCGCTCGGCGAGACCTCCACCCGCGAATCGCGCCATGCGCGCGACGCCGGCACGATCCGCGGCGTGATGCAGCACAAG GGCGCGTTCTTCACGGTGGTCGGCTTCACGGCAGGCGGCTCGCTGATCTTCTACACGTTCACCACCTACATGCAGAAGTA CCTCGTCAACACGGCGGGCATGCCTGCGAAGACGGCCAGCAACGTGATGACGATGGCGCTGCTCGTCTACATGCTGCTGC AGCCGGTGTTCGGCGCGCTGTCGGACCGCATCGGCCGGCGCAGCTCGATGCTGCTGTTCGGCGGCCTCGCGGTGCTCGGC ACGGTGCCGCTGATGCATGCGATCGCCGGCACCAGGAGCCCGATGACGGCATTCGTGCTGATCACGGTCGCGCTCGCCGT CGTCAGCTTCTATACCTCGATCAGCGGCCTGATCAAGGCCGAGATGTTTCCGCCCGAAGTCCGCGCGATGGGCGTGGGCC TTTCTTACGCGGTGGCCAATGCGCTGTTCGGCGGCACGGCCGAGTACGTGGCGCTGTGGTTCAAGCAGGCCGGCACCGAG GCGACGTTCTACTGGTACGTGACGGCGCTGTGCGCGATCTCGTTCCTGGTGTCGTGGCGCATGCGCGACCCGGCCAGGGA AGGCTATCTGCGGCACGAGCCGTGA
Upstream 100 bases:
>100_bases CGTGCACCGGCCGCCCGGCGCGGCCGGGTGCGCCATGCGCAGCGCGCGTCGCGCCCATGCCCCCGCACGCATCCCACGAC CCATCGAGGACCGCAACTGC
Downstream 100 bases:
>100_bases GCGGCGGCGCCGCCGGCGTAACGGCGCGATCGCGATAACGATATCGGAAATGCTTGGTTGTGGTCACGCGGCGGGCCCCT TAATCTGAACCCGTAGTTCG
Product: major facilitator superfamily metabolite/H symporter
Products: Proton [Cytoplasm]; 2-oxoglutarate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 434; Mature: 433
Protein sequence:
>434_residues MTDLTDPAHLAANDTRRRVFAIVGASSGNLVEWFDFYIYSFCSLYFAHAFFPSGNPTTQLLNTAGVFAAGFLMRPIGGWL FGRIADRRGRRTAMMISVLMMCGGSLVIAALPTYDQIGALAPVMLLVARLLQGLSVGGEYGTSATYMSEVALKGRRGFFA SFQYVTLIGGQLCALLVLVILQQFLTTEELRAWGWRIPFLVGALAALVSLYLRKSLGETSTRESRHARDAGTIRGVMQHK GAFFTVVGFTAGGSLIFYTFTTYMQKYLVNTAGMPAKTASNVMTMALLVYMLLQPVFGALSDRIGRRSSMLLFGGLAVLG TVPLMHAIAGTRSPMTAFVLITVALAVVSFYTSISGLIKAEMFPPEVRAMGVGLSYAVANALFGGTAEYVALWFKQAGTE ATFYWYVTALCAISFLVSWRMRDPAREGYLRHEP
Sequences:
>Translated_434_residues MTDLTDPAHLAANDTRRRVFAIVGASSGNLVEWFDFYIYSFCSLYFAHAFFPSGNPTTQLLNTAGVFAAGFLMRPIGGWL FGRIADRRGRRTAMMISVLMMCGGSLVIAALPTYDQIGALAPVMLLVARLLQGLSVGGEYGTSATYMSEVALKGRRGFFA SFQYVTLIGGQLCALLVLVILQQFLTTEELRAWGWRIPFLVGALAALVSLYLRKSLGETSTRESRHARDAGTIRGVMQHK GAFFTVVGFTAGGSLIFYTFTTYMQKYLVNTAGMPAKTASNVMTMALLVYMLLQPVFGALSDRIGRRSSMLLFGGLAVLG TVPLMHAIAGTRSPMTAFVLITVALAVVSFYTSISGLIKAEMFPPEVRAMGVGLSYAVANALFGGTAEYVALWFKQAGTE ATFYWYVTALCAISFLVSWRMRDPAREGYLRHEP >Mature_433_residues TDLTDPAHLAANDTRRRVFAIVGASSGNLVEWFDFYIYSFCSLYFAHAFFPSGNPTTQLLNTAGVFAAGFLMRPIGGWLF GRIADRRGRRTAMMISVLMMCGGSLVIAALPTYDQIGALAPVMLLVARLLQGLSVGGEYGTSATYMSEVALKGRRGFFAS FQYVTLIGGQLCALLVLVILQQFLTTEELRAWGWRIPFLVGALAALVSLYLRKSLGETSTRESRHARDAGTIRGVMQHKG AFFTVVGFTAGGSLIFYTFTTYMQKYLVNTAGMPAKTASNVMTMALLVYMLLQPVFGALSDRIGRRSSMLLFGGLAVLGT VPLMHAIAGTRSPMTAFVLITVALAVVSFYTSISGLIKAEMFPPEVRAMGVGLSYAVANALFGGTAEYVALWFKQAGTEA TFYWYVTALCAISFLVSWRMRDPAREGYLRHEP
Specific function: Uptake of alpha-ketoglutarate across the boundary membrane with the concomitant import of a cation (symport system) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1788942, Length=417, Percent_Identity=67.3860911270983, Blast_Score=550, Evalue=1e-157, Organism=Escherichia coli, GI1788292, Length=430, Percent_Identity=29.7674418604651, Blast_Score=187, Evalue=8e-49, Organism=Escherichia coli, GI1790550, Length=428, Percent_Identity=26.8691588785047, Blast_Score=184, Evalue=7e-48, Organism=Escherichia coli, GI1789941, Length=403, Percent_Identity=32.258064516129, Blast_Score=176, Evalue=2e-45, Organism=Escherichia coli, GI87082231, Length=318, Percent_Identity=26.7295597484277, Blast_Score=89, Evalue=8e-19, Organism=Escherichia coli, GI87082404, Length=370, Percent_Identity=25.4054054054054, Blast_Score=77, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 47278; Mature: 47147
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLTDPAHLAANDTRRRVFAIVGASSGNLVEWFDFYIYSFCSLYFAHAFFPSGNPTTQL CCCCCCCHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH LNTAGVFAAGFLMRPIGGWLFGRIADRRGRRTAMMISVLMMCGGSLVIAALPTYDQIGAL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHH APVMLLVARLLQGLSVGGEYGTSATYMSEVALKGRRGFFASFQYVTLIGGQLCALLVLVI HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH LQQFLTTEELRAWGWRIPFLVGALAALVSLYLRKSLGETSTRESRHARDAGTIRGVMQHK HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC GAFFTVVGFTAGGSLIFYTFTTYMQKYLVNTAGMPAKTASNVMTMALLVYMLLQPVFGAL CCEEEEEEECCCCCEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SDRIGRRSSMLLFGGLAVLGTVPLMHAIAGTRSPMTAFVLITVALAVVSFYTSISGLIKA HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH EMFPPEVRAMGVGLSYAVANALFGGTAEYVALWFKQAGTEATFYWYVTALCAISFLVSWR CCCCCHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH MRDPAREGYLRHEP CCCHHHCCCCCCCC >Mature Secondary Structure TDLTDPAHLAANDTRRRVFAIVGASSGNLVEWFDFYIYSFCSLYFAHAFFPSGNPTTQL CCCCCCHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH LNTAGVFAAGFLMRPIGGWLFGRIADRRGRRTAMMISVLMMCGGSLVIAALPTYDQIGAL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHH APVMLLVARLLQGLSVGGEYGTSATYMSEVALKGRRGFFASFQYVTLIGGQLCALLVLVI HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH LQQFLTTEELRAWGWRIPFLVGALAALVSLYLRKSLGETSTRESRHARDAGTIRGVMQHK HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC GAFFTVVGFTAGGSLIFYTFTTYMQKYLVNTAGMPAKTASNVMTMALLVYMLLQPVFGAL CCEEEEEEECCCCCEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SDRIGRRSSMLLFGGLAVLGTVPLMHAIAGTRSPMTAFVLITVALAVVSFYTSISGLIKA HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH EMFPPEVRAMGVGLSYAVANALFGGTAEYVALWFKQAGTEATFYWYVTALCAISFLVSWR CCCCCHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH MRDPAREGYLRHEP CCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; 2-oxoglutarate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + 2-oxoglutarate [Periplasm] = Proton [Cytoplasm] + 2-oxoglutarate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2118499; 9205837; 9278503; 1709493; 2190187; 2053984; 8419306 [H]