| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027189
Identifier: 238027189
GI number: 238027189
Start: 1725045
End: 1725473
Strand: Reverse
Name: 238027189
Synonym: bglu_1g15750
Alternate gene names: NA
Gene position: 1725473-1725045 (Counterclockwise)
Preceding gene: 238027199
Following gene: 238027183
Centisome position: 44.17
GC content: 48.72
Gene sequence:
>429_bases ATGAACAAAATTCTCTTTTTGCTAGCAGCTATCGTCATAGCGATCGATCTTTCATTGCGCTACAGACGGCGCACACGCTC GCAGCAGAAAAAGCAAGCCTCCATCGATCTCAGTGCTCGCACGCCACCTCCACGAAGATCCGGCATGTCAGCCGAAGAAA TAATTGCTGACGAATCCAGATATTTAGCAGAGGTTCATGCCAAAGGAAAATCGGCATTTGAACGCGATCGAAATAATGCA ATCACGATCGGTTCTAAATACTATATTTGGCGCACATGCGGCGACGGATCTGTTTGCGATGCGTGCGCAAAAAATGAGGG ACTTCGTTTTTCTTGGAAAAGATCCCCATCAATCGGACACCCAGGGTTTCACCTATGTTCCACGGACCAGCCGTGCAGGT GTTACGCAGAGACGGTAATACCGGACTAG
Upstream 100 bases:
>100_bases GCCGACAGGTCGAGAGCATTCCCAGAATCGGGACCAATGATCAGGGAAATTTTTCGGCCAAACTGAACCGCACCCATGAT TCCACCCTTTACGAATCGTT
Downstream 100 bases:
>100_bases CTTACAGCCCAAAAAACGTGTGAGCCGAGGCCCAAGTCATCGAAGGTCGGCACATTGTCGGGGTTGTCGGCGCCCTGCAC CCAGAGGCGCCCGCCAAACC
Product: putative bacteriophage protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MNKILFLLAAIVIAIDLSLRYRRRTRSQQKKQASIDLSARTPPPRRSGMSAEEIIADESRYLAEVHAKGKSAFERDRNNA ITIGSKYYIWRTCGDGSVCDACAKNEGLRFSWKRSPSIGHPGFHLCSTDQPCRCYAETVIPD
Sequences:
>Translated_142_residues MNKILFLLAAIVIAIDLSLRYRRRTRSQQKKQASIDLSARTPPPRRSGMSAEEIIADESRYLAEVHAKGKSAFERDRNNA ITIGSKYYIWRTCGDGSVCDACAKNEGLRFSWKRSPSIGHPGFHLCSTDQPCRCYAETVIPD >Mature_142_residues MNKILFLLAAIVIAIDLSLRYRRRTRSQQKKQASIDLSARTPPPRRSGMSAEEIIADESRYLAEVHAKGKSAFERDRNNA ITIGSKYYIWRTCGDGSVCDACAKNEGLRFSWKRSPSIGHPGFHLCSTDQPCRCYAETVIPD
Specific function: Unknown
COG id: COG2369
COG function: function code S; Uncharacterized protein, homolog of phage Mu protein gp30
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15979; Mature: 15979
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKILFLLAAIVIAIDLSLRYRRRTRSQQKKQASIDLSARTPPPRRSGMSAEEIIADESR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCHHHHHHCCHH YLAEVHAKGKSAFERDRNNAITIGSKYYIWRTCGDGSVCDACAKNEGLRFSWKRSPSIGH HHHHHHHCCHHHHHHCCCCEEEECCEEEEEEECCCCCHHHHHHCCCCCEEEECCCCCCCC PGFHLCSTDQPCRCYAETVIPD CCCEECCCCCCHHHHHHCCCCC >Mature Secondary Structure MNKILFLLAAIVIAIDLSLRYRRRTRSQQKKQASIDLSARTPPPRRSGMSAEEIIADESR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCHHHHHHCCHH YLAEVHAKGKSAFERDRNNAITIGSKYYIWRTCGDGSVCDACAKNEGLRFSWKRSPSIGH HHHHHHHCCHHHHHHCCCCEEEECCEEEEEEECCCCCHHHHHHCCCCCEEEECCCCCCCC PGFHLCSTDQPCRCYAETVIPD CCCEECCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA