| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is 238027136
Identifier: 238027136
GI number: 238027136
Start: 1680468
End: 1681463
Strand: Reverse
Name: 238027136
Synonym: bglu_1g15170
Alternate gene names: NA
Gene position: 1681463-1680468 (Counterclockwise)
Preceding gene: 238027137
Following gene: 238027135
Centisome position: 43.04
GC content: 67.17
Gene sequence:
>996_bases GTGAGCGAGAACAGCAAGATCGAATGGACGGACCACACCTTTAATCCGTGGGTCGGCTGCACCAAGGTCTCGCCGGGCTG CGACAACTGCTACGCCGAAGCGATGATGGACACGCGCCTGCGCCGCGTGACGTGGGGCGCCGGCCAACTGCGCTCGCGCA CGTCGGCTGCAAACTGGCGCGAGCCGGTGCGATGGAACGCGCAGCACCAGCAGTTCTTTGCCGTCCACGGCCGGCGACAG CGCGTCTTCTGCGCGTCGCTCGCCGACGTGTTCGACAACGCCGTGCCGGCGATCTGGCGCCGCGATCTCGGCGCTCTGAT CGAATCCACGCCGAACCTGGACTGGCTGCTGCTCACGAAGCGGATCGGCAATGCGGCCGCGATGCTGGTCGACATGTTCC CGGGCGGCATGCCGGATCACGTCTGGCTCGGCGCGACCGTTGTGAATCAGAACGAGGCCGACCGCGACGTCCCGAAGTTG CTGGCCACGCCAGCGCGCGTCCGGTTCCTGTCGATCGAGCCGATGCTCGGGCCGATCGATCTCAACCAGGCGCTCCCGCC GTTTCATTGTGACACCTGCGACGCCGACTATGGCGCGCTGTCGGCCCACGCATCTGGAACGCCGATCGGCATCGACTGGG TCATCGCCGGCGGCGAAAGCGGCCACCGCGCGCGGCCCGCCCATCCCGACTGGTTCCGCTCGTTGCGCGACCAGTGTGCG GCTGCGGGCGTGCCGTTCATGTTCAAGCAGTGGGGAGAGTACCTGCCATGGACGCACTTTCATGGCGCGTGCATCGACGA TCGTCCTGAACAAACTCGCTTCCAAACCATGGAATGGACCGGTGACCAGTGGGGCGATGTCGGCTACCCGCTGGCCGCCG ACTCTGCTGACGGCGACATCGACGGCCTGCAGTGCGTCGGCGGCGTCGGCAAGCGCGCCGCCGGCCGGCTGCTCGACGGC GTCGAGCACAACGGATTTCCCGAGGTTTCCCGATGA
Upstream 100 bases:
>100_bases TGAACCCATTTCTCGTGGCCGCCGGCCTGGTGCGCGCGCCGGCCGGCACGCCCGGCCGCGTCTTCAAGCAGCCGATGAAC CCCGACGACGAGGTGCCGGC
Downstream 100 bases:
>100_bases AAGCCAAGTTCAAGATCGAGCGTCCGGACAACATTCCGATGACGCTCACCCTCACGATGACCGGCGGTCAGTGGAAGAAG CTGCGCGAGCAGCTCGCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: Phage /Gp; Bacteriophage Protein Gp; Gp37gp68 Family Protein; ABC Transporter Subunit; Phage ; ABC Transporter; Bacteriophage Protein; Phage Protein Gp; Phage Protein; Phage Gp
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MSENSKIEWTDHTFNPWVGCTKVSPGCDNCYAEAMMDTRLRRVTWGAGQLRSRTSAANWREPVRWNAQHQQFFAVHGRRQ RVFCASLADVFDNAVPAIWRRDLGALIESTPNLDWLLLTKRIGNAAAMLVDMFPGGMPDHVWLGATVVNQNEADRDVPKL LATPARVRFLSIEPMLGPIDLNQALPPFHCDTCDADYGALSAHASGTPIGIDWVIAGGESGHRARPAHPDWFRSLRDQCA AAGVPFMFKQWGEYLPWTHFHGACIDDRPEQTRFQTMEWTGDQWGDVGYPLAADSADGDIDGLQCVGGVGKRAAGRLLDG VEHNGFPEVSR
Sequences:
>Translated_331_residues MSENSKIEWTDHTFNPWVGCTKVSPGCDNCYAEAMMDTRLRRVTWGAGQLRSRTSAANWREPVRWNAQHQQFFAVHGRRQ RVFCASLADVFDNAVPAIWRRDLGALIESTPNLDWLLLTKRIGNAAAMLVDMFPGGMPDHVWLGATVVNQNEADRDVPKL LATPARVRFLSIEPMLGPIDLNQALPPFHCDTCDADYGALSAHASGTPIGIDWVIAGGESGHRARPAHPDWFRSLRDQCA AAGVPFMFKQWGEYLPWTHFHGACIDDRPEQTRFQTMEWTGDQWGDVGYPLAADSADGDIDGLQCVGGVGKRAAGRLLDG VEHNGFPEVSR >Mature_330_residues SENSKIEWTDHTFNPWVGCTKVSPGCDNCYAEAMMDTRLRRVTWGAGQLRSRTSAANWREPVRWNAQHQQFFAVHGRRQR VFCASLADVFDNAVPAIWRRDLGALIESTPNLDWLLLTKRIGNAAAMLVDMFPGGMPDHVWLGATVVNQNEADRDVPKLL ATPARVRFLSIEPMLGPIDLNQALPPFHCDTCDADYGALSAHASGTPIGIDWVIAGGESGHRARPAHPDWFRSLRDQCAA AGVPFMFKQWGEYLPWTHFHGACIDDRPEQTRFQTMEWTGDQWGDVGYPLAADSADGDIDGLQCVGGVGKRAAGRLLDGV EHNGFPEVSR
Specific function: Unknown
COG id: COG4422
COG function: function code S; Bacteriophage protein gp37
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36697; Mature: 36565
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSENSKIEWTDHTFNPWVGCTKVSPGCDNCYAEAMMDTRLRRVTWGAGQLRSRTSAANWR CCCCCEEEECCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCC EPVRWNAQHQQFFAVHGRRQRVFCASLADVFDNAVPAIWRRDLGALIESTPNLDWLLLTK CCCCCCCCHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEH RIGNAAAMLVDMFPGGMPDHVWLGATVVNQNEADRDVPKLLATPARVRFLSIEPMLGPID HHCCHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCCEEEEEECCCCCCCC LNQALPPFHCDTCDADYGALSAHASGTPIGIDWVIAGGESGHRARPAHPDWFRSLRDQCA CCCCCCCCCCCCCCCCCCCEECCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHH AAGVPFMFKQWGEYLPWTHFHGACIDDRPEQTRFQTMEWTGDQWGDVGYPLAADSADGDI HCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHEEEEECCCCCCCCCCCCEECCCCCCCC DGLQCVGGVGKRAAGRLLDGVEHNGFPEVSR CHHHHHCCCCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SENSKIEWTDHTFNPWVGCTKVSPGCDNCYAEAMMDTRLRRVTWGAGQLRSRTSAANWR CCCCEEEECCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCC EPVRWNAQHQQFFAVHGRRQRVFCASLADVFDNAVPAIWRRDLGALIESTPNLDWLLLTK CCCCCCCCHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEH RIGNAAAMLVDMFPGGMPDHVWLGATVVNQNEADRDVPKLLATPARVRFLSIEPMLGPID HHCCHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCCEEEEEECCCCCCCC LNQALPPFHCDTCDADYGALSAHASGTPIGIDWVIAGGESGHRARPAHPDWFRSLRDQCA CCCCCCCCCCCCCCCCCCCEECCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHH AAGVPFMFKQWGEYLPWTHFHGACIDDRPEQTRFQTMEWTGDQWGDVGYPLAADSADGDI HCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHEEEEECCCCCCCCCCCCEECCCCCCCC DGLQCVGGVGKRAAGRLLDGVEHNGFPEVSR CHHHHHCCCCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA