| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027112
Identifier: 238027112
GI number: 238027112
Start: 1648985
End: 1649611
Strand: Reverse
Name: 238027112
Synonym: bglu_1g14920
Alternate gene names: NA
Gene position: 1649611-1648985 (Counterclockwise)
Preceding gene: 238027113
Following gene: 238027109
Centisome position: 42.23
GC content: 74.48
Gene sequence:
>627_bases ATGGCCGACGCCGACGAAGACGGGGGGCCGCGCCGCGCCGCTCGCGAGCATTTCGAGGCGAAGTTCGCGCAGCAGGCGGA CCCGTGGCACTACCGCACGAGCTGGTACGAGACGCGCAAGCGCGCGCTGATGCTGGCCGCGCTGCCGCGCGAACGCTATC GGCGCGGCTTCGAGCCCGGCTGCGCGAACGGCGAGCTGTCGGCCTGCCTCGCGCCGCGCTGCGAGCTGCTGCGGTGCGCC GACTTCGCGCCTAGCGCCGCCGCGCTCGCGCGCGCGCGTCTGGCCGGATTCGCGCAGGCCAGCGTCGAGCTGCGGACCAT GCCCGAGGACTGGCCGGAGGGCCGTTTCGATCTGGTCGTCATCAGCGAGTTCGCCTACTACCTCGATGCCTCGCGCTGCG CGCAACTTGCGCGGCTCGCCTGCGCGGCGCTCGACGCCGACGGCACGCTGGCGTGCTGTCACTGGCGCCACGGCGCCGAG GACATGATGCTGAGCGCTGCCGCGGTCCACGCGCTGTTCGCGCAGGCCGCGCGGCAGGCCGGGCTGCATGCGCGCACGCG GGTGGACGACGCCGATTTCCTGCTCGAGGTGTGGAGCGCCGAGGCCCCGCCTGCGGCGCGGCGCTGA
Upstream 100 bases:
>100_bases CGGTGTTCCTGCGCCAGAGCCACGCCGAACGCGACCTGGCCGTGCTCGGCGCAACCGTGGCGACCGAGCCCGCACCGTGG CCGCTGTGAGGGCGCGCTCC
Downstream 100 bases:
>100_bases GCGCGCCCTCAGCGCGTCCGGGCGCGGCGCTCGGCGAGCCAGTAGCGCTCGGGCGCGTCCAGATCGGCCAGCCGCGCGTC GCCGAACGCGCGCAGCTGGC
Product: putative methyltransferase protein
Products: NA
Alternate protein names: Methyltransferase Type; LmbE Family Protein; Methyltransferase Protein; Acyl-CoA Dehydrogenase/Methyltransferase; NodS Family Protein; SAM-Dependent Methyltransferase; LmbE-Like Protein; Sam Dependent Methyltransferase
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MADADEDGGPRRAAREHFEAKFAQQADPWHYRTSWYETRKRALMLAALPRERYRRGFEPGCANGELSACLAPRCELLRCA DFAPSAAALARARLAGFAQASVELRTMPEDWPEGRFDLVVISEFAYYLDASRCAQLARLACAALDADGTLACCHWRHGAE DMMLSAAAVHALFAQAARQAGLHARTRVDDADFLLEVWSAEAPPAARR
Sequences:
>Translated_208_residues MADADEDGGPRRAAREHFEAKFAQQADPWHYRTSWYETRKRALMLAALPRERYRRGFEPGCANGELSACLAPRCELLRCA DFAPSAAALARARLAGFAQASVELRTMPEDWPEGRFDLVVISEFAYYLDASRCAQLARLACAALDADGTLACCHWRHGAE DMMLSAAAVHALFAQAARQAGLHARTRVDDADFLLEVWSAEAPPAARR >Mature_207_residues ADADEDGGPRRAAREHFEAKFAQQADPWHYRTSWYETRKRALMLAALPRERYRRGFEPGCANGELSACLAPRCELLRCAD FAPSAAALARARLAGFAQASVELRTMPEDWPEGRFDLVVISEFAYYLDASRCAQLARLACAALDADGTLACCHWRHGAED MMLSAAAVHALFAQAARQAGLHARTRVDDADFLLEVWSAEAPPAARR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22998; Mature: 22867
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADADEDGGPRRAAREHFEAKFAQQADPWHYRTSWYETRKRALMLAALPRERYRRGFEPG CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCC CANGELSACLAPRCELLRCADFAPSAAALARARLAGFAQASVELRTMPEDWPEGRFDLVV CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCEEEEE ISEFAYYLDASRCAQLARLACAALDADGTLACCHWRHGAEDMMLSAAAVHALFAQAARQA HHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHC GLHARTRVDDADFLLEVWSAEAPPAARR CCHHHHCCCHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure ADADEDGGPRRAAREHFEAKFAQQADPWHYRTSWYETRKRALMLAALPRERYRRGFEPG CCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCC CANGELSACLAPRCELLRCADFAPSAAALARARLAGFAQASVELRTMPEDWPEGRFDLVV CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCEEEEE ISEFAYYLDASRCAQLARLACAALDADGTLACCHWRHGAEDMMLSAAAVHALFAQAARQA HHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHC GLHARTRVDDADFLLEVWSAEAPPAARR CCHHHHCCCHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA