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The map label for this gene is ctaC [H]

Identifier: 238027109

GI number: 238027109

Start: 1645263

End: 1646318

Strand: Reverse

Name: ctaC [H]

Synonym: bglu_1g14890

Alternate gene names: 238027109

Gene position: 1646318-1645263 (Counterclockwise)

Preceding gene: 238027112

Following gene: 238027108

Centisome position: 42.14

GC content: 76.52

Gene sequence:

>1056_bases
GTGCCCGCCCGGCAGCGTGACGCACGGCGCAGGCCGCGCGCGGACCTGCACGCCGTCGCGCGCTATGCCGGCTGCGGTGG
TCTCGCCGCCGGCCTGCCGGCGCGTGCCGCCGCAGAGGCGGCCCAAGGCGCGCGGCCGCTGGCCTATATCGCGCACGCGG
CGGGGCCGGCCGCGCGGCCGGTGCTGGTGCTGGGCTGGGCCCTGATCGCGCTGGCGGCGGGCGTGTGCCTGGTGATCGCC
GTGCTGCTGGCGCTGGCGATCTGGCGGCGCGGCCGGCGCGACGGGCGCGGCGGCCTGACGATGGTGGTCGGCGGCACGCT
CGTCTCGACGCTGCTGCTGTTCGCGGCCACGGTGGCGATGCTGCGCGTGCTCGGCATGGTGGCCGCGCCGCCGCGCCGGC
CGGCGCTGACGATCGTGGTGAGCGCCTACGACTGGTGGTGGCGCGCCGCCTATCCGGCCCAGGACGGGCACGGCGCCGCG
ATGGTGACCGCCAACGAGATTCACATCCCGGTCGGCGAGCCGGTGCGGATCGAGCTGCACAGCGCCGACGTGATCCACGC
GTTCTGGGTGCCGCAACTGGCCGGCAAGACGCAGGCCATTCCCGGCCAGACCAACCACCAGTGGCTGCAGGCGGACCAGC
CGGGCGTCTACCGCGGCCAGTGCTCGCAATACTGCGGCGTGCAGCACGCGCACATGGCCTTCGAGGTGATCGCGCAGCCG
CCCGATGCCTATCGCGCATGGCTCGCCGCGCAGCGCCGGCCGGCCGAGGCGCCGCGCACGGCCCAGGCGCGGCGCGGCCA
GGCCGTGTTCGCGGCGCGCTGCGCCGGATGCCATGCGATCCGCGGCAGCGAGGCGGCCGGCAGCGCCGGGCCGGATCTCA
CGCATCTGGGCGCGCGCCGGCTGCTCGCGGCCGGCACGTTCGCCAACACCCCCGCCAACCTGCGCCGCTGGATCGCGCAG
GCGCAGCAGCTCAAGCCCGGCAGCGCGATGCCGTCGATCGCGCTCGACGCCGGCGACGCCGATGCGCTGGCCGCCTATCT
CGCCACCCTGCACTGA

Upstream 100 bases:

>100_bases
CTGCCTTCCGTTCCCGCCCGCCCTGGGGCACGCCGCCGCGCACGAGCGGCCGGCCTGTCGCCGCTCGCCGCGCGGCGGTC
CCCGCGCCGCGGGCCCGGCC

Downstream 100 bases:

>100_bases
GCCGCCGATGCCGCCCCGCCCCGCCACCGCCACCGCCACCGCCACCGCCACGCGCCCGCCGCCGCTCGCCCGCCGCCCCG
AACTCGACGCGATCACACCC

Product: cytochrome c, monoheme

Products: NA

Alternate protein names: Cytochrome aa3 subunit 2; Cytochrome c oxidase polypeptide II; Oxidase aa(3) subunit 2 [H]

Number of amino acids: Translated: 351; Mature: 350

Protein sequence:

>351_residues
MPARQRDARRRPRADLHAVARYAGCGGLAAGLPARAAAEAAQGARPLAYIAHAAGPAARPVLVLGWALIALAAGVCLVIA
VLLALAIWRRGRRDGRGGLTMVVGGTLVSTLLLFAATVAMLRVLGMVAAPPRRPALTIVVSAYDWWWRAAYPAQDGHGAA
MVTANEIHIPVGEPVRIELHSADVIHAFWVPQLAGKTQAIPGQTNHQWLQADQPGVYRGQCSQYCGVQHAHMAFEVIAQP
PDAYRAWLAAQRRPAEAPRTAQARRGQAVFAARCAGCHAIRGSEAAGSAGPDLTHLGARRLLAAGTFANTPANLRRWIAQ
AQQLKPGSAMPSIALDAGDADALAAYLATLH

Sequences:

>Translated_351_residues
MPARQRDARRRPRADLHAVARYAGCGGLAAGLPARAAAEAAQGARPLAYIAHAAGPAARPVLVLGWALIALAAGVCLVIA
VLLALAIWRRGRRDGRGGLTMVVGGTLVSTLLLFAATVAMLRVLGMVAAPPRRPALTIVVSAYDWWWRAAYPAQDGHGAA
MVTANEIHIPVGEPVRIELHSADVIHAFWVPQLAGKTQAIPGQTNHQWLQADQPGVYRGQCSQYCGVQHAHMAFEVIAQP
PDAYRAWLAAQRRPAEAPRTAQARRGQAVFAARCAGCHAIRGSEAAGSAGPDLTHLGARRLLAAGTFANTPANLRRWIAQ
AQQLKPGSAMPSIALDAGDADALAAYLATLH
>Mature_350_residues
PARQRDARRRPRADLHAVARYAGCGGLAAGLPARAAAEAAQGARPLAYIAHAAGPAARPVLVLGWALIALAAGVCLVIAV
LLALAIWRRGRRDGRGGLTMVVGGTLVSTLLLFAATVAMLRVLGMVAAPPRRPALTIVVSAYDWWWRAAYPAQDGHGAAM
VTANEIHIPVGEPVRIELHSADVIHAFWVPQLAGKTQAIPGQTNHQWLQADQPGVYRGQCSQYCGVQHAHMAFEVIAQPP
DAYRAWLAAQRRPAEAPRTAQARRGQAVFAARCAGCHAIRGSEAAGSAGPDLTHLGARRLLAAGTFANTPANLRRWIAQA
QQLKPGSAMPSIALDAGDADALAAYLATLH

Specific function: Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

Organism=Homo sapiens, GI251831110, Length=143, Percent_Identity=32.1678321678322, Blast_Score=80, Evalue=4e-15,
Organism=Escherichia coli, GI1786635, Length=256, Percent_Identity=26.171875, Blast_Score=76, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6226540, Length=139, Percent_Identity=28.7769784172662, Blast_Score=68, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001505
- InterPro:   IPR008972
- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR014222
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759 [H]

Pfam domain/function: PF00116 COX2; PF02790 COX2_TM; PF00034 Cytochrom_C [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 36973; Mature: 36842

Theoretical pI: Translated: 10.94; Mature: 10.94

Prosite motif: PS00078 COX2 ; PS50857 COX2_CUA ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPARQRDARRRPRADLHAVARYAGCGGLAAGLPARAAAEAAQGARPLAYIAHAAGPAARP
CCCCCCHHHCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHCCCCHHHHHHHHCCCCCCH
VLVLGWALIALAAGVCLVIAVLLALAIWRRGRRDGRGGLTMVVGGTLVSTLLLFAATVAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHH
LRVLGMVAAPPRRPALTIVVSAYDWWWRAAYPAQDGHGAAMVTANEIHIPVGEPVRIELH
HHHHHHHCCCCCCCEEEEEEECCCCHHHCCCCCCCCCCEEEEEECEEEECCCCCEEEEEE
SADVIHAFWVPQLAGKTQAIPGQTNHQWLQADQPGVYRGQCSQYCGVQHAHMAFEVIAQP
CCCEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCC
PDAYRAWLAAQRRPAEAPRTAQARRGQAVFAARCAGCHAIRGSEAAGSAGPDLTHLGARR
CHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHCHHHCCCCCCCCCCCCCHHHHHHHH
LLAAGTFANTPANLRRWIAQAQQLKPGSAMPSIALDAGDADALAAYLATLH
HHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHCC
>Mature Secondary Structure 
PARQRDARRRPRADLHAVARYAGCGGLAAGLPARAAAEAAQGARPLAYIAHAAGPAARP
CCCCCHHHCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHCCCCHHHHHHHHCCCCCCH
VLVLGWALIALAAGVCLVIAVLLALAIWRRGRRDGRGGLTMVVGGTLVSTLLLFAATVAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHH
LRVLGMVAAPPRRPALTIVVSAYDWWWRAAYPAQDGHGAAMVTANEIHIPVGEPVRIELH
HHHHHHHCCCCCCCEEEEEEECCCCHHHCCCCCCCCCCEEEEEECEEEECCCCCEEEEEE
SADVIHAFWVPQLAGKTQAIPGQTNHQWLQADQPGVYRGQCSQYCGVQHAHMAFEVIAQP
CCCEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCC
PDAYRAWLAAQRRPAEAPRTAQARRGQAVFAARCAGCHAIRGSEAAGSAGPDLTHLGARR
CHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHCHHHCCCCCCCCCCCCCHHHHHHHH
LLAAGTFANTPANLRRWIAQAQQLKPGSAMPSIALDAGDADALAAYLATLH
HHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7678007 [H]