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The map label for this gene is ctaD [H]

Identifier: 238027108

GI number: 238027108

Start: 1642601

End: 1645255

Strand: Reverse

Name: ctaD [H]

Synonym: bglu_1g14880

Alternate gene names: 238027108

Gene position: 1645255-1642601 (Counterclockwise)

Preceding gene: 238027109

Following gene: 238027107

Centisome position: 42.12

GC content: 71.19

Gene sequence:

>2655_bases
ATGCCGCCCCGCCCCGCCACCGCCACCGCCACCGCCACCGCCACGCGCCCGCCGCCGCTCGCCCGCCGCCCCGAACTCGA
CGCGATCACACCCGATTCCGCCGAGGCGAGGGCGCTCGCGCAATTATGGGAATCGCCGCCCGGCCTGCGCGGCTGGCTCG
CCACCGTCGATCACAAACGCATCGGCCTGCGCTACATCGTGACCGCGTTCGCGTTCCTGCTGGCCGGCGGCGCGGAGGCG
CTGGTGATGCGCGTGCAACTCGCGCGGCCCGAGGCCAGCGTGCTCACGCCGCAGCAGTACGACGCGCTGTTCACGATGCA
CGGCGTGACGATGATCTTTCTTTACGCCCTGCCGGTGCTGTCGGGCTTCGCGAACTATCTCTGGCCGCTGATGCTCGGCT
CGCGCGACATGGCGTTCCCGCGCCTGAACGCGTTCTCGTACTGGTCGTTCCTGGGCGCCGGACTGTTCCTGTACGCGAGC
TTTCCACTCGGCGCGGCGCCCGACGCGGGCTGGTTCAACTACGTCCCGCTCGCCTCGCTCGACTACAGCCGCGGCGTGAA
CCTCGACATCTACGCGATCGGCATGATCCTGCTCGGCATCTCGACCACCGGCGGCGCGGCGAACTTCATCGTCACGCTGC
TGCGCATGCGCGCCCACGGCATGTCGGTGGACCGCCTGCCGATCATCGTGTGGGGCACGCTGACGGCCTCGGTGGCGAAC
CTGCTCGCCGTGCCCTCGGTGAGCCTCGCGTTCTTCCTGCTCTGGATGGACCGCAACGCCGGCACCCACTTCTTCGACGT
CGCCCGCGACGGCCGGCCGCTGCTCTGGCAGCACCTGTTCTGGATGTTCGCGCATCCCTGGGTGTACGTGGTGGTGCTGC
CGGCCATGGGGATCGTCTCGGACGCGCTGCCCACCTTCTGCCGGCGCCCGCTGGTGGCCTACGAGGCGGTGGCGGTCTCG
ACCGTCGCCACCATGCTGGTGGGCTTCGAGGTCTGGGTGCATCACATGTTCGCCACCGGCATCGCGCCGCTCGCGCTGGC
GTTCTTCGGCGCGGCCAGCATGCTGATCTCGATTCCGAGCGCGGTGGCCGTGTTCGCCTGGATCGCGACGATCTGGACCG
GGCGGCCGGTGTTCCGCACGCCGTTTCTCTACTTCGCCGGCTTCGTGCTGATGTTCACGGTGGGCGGCGTCTCGGGCGTG
ATGACGGCCGCCGTGCCGCTCGACTGGCAGCTGACCGACACCTACTTCGTGGTGGCGCACCTGCACTACGTGCTGCTCGG
CATCAACGTGTTCCCGGTGCTGGGCGGCATCACCTACTGGTTCCCGAAGTTCACCGGCCGCCTGATGAACGAGCGATTCG
GCCGCGCCACGTTCTGGGTGATCGCGATCGGCTTCAACCTCGGCTTCTTTCCGATGCACGTCTCCGGCTTGCTGGGCATG
CCGCGCCGCATCTATACCTATCCCGCCGGGATGGGCTGGAACACCTCGAACCTGCTGTCGACGATCGGCGCGTTCGTGTT
CGGCGCCGGCACCCTGATGTTCGTCGCCAACGCGCTGGTGAGCGCGCGGCGCGGCCGCCGCGCCGGCGCGAACCCGTGGC
GCGCGCCCGGCCTCGAGTGGTCGGTGCCCTCGCCCGCGCCCGTCTACAACTTCGCGACGCTGCCGCTGATCGGCTCGCGC
CATCCAATGTGGGAGCCGGCCGACGCGGCGCGACGCTCCAGCCTGCAGGTCGGCTATCGGCTCCACGAGGGCCGCGAGGC
GCTGGCGGTCACGCCGCTGGCCGCGCGGCCGGACGCGATCCTGAAGATGCCCGCCGACAGTGCCGTGCCGTTCGTGCTGG
CATCGCTGGCCACCCTGCTCGGCGCGGCCCTGCTGGTGCGCTCGCCCACGCTCGCGGCGCTGGCGGCGGCCGGCTGCGCC
GCGGCGCTCGGGTTCTGGCTGTGGCCGCGCGACTCGCTCGGCCAGCGCGCGCGGGCGGGAGCGCCGGCGCGCCAGGCGGC
ACCGGAGTCGCGCGCCGCGGCGCGGCTGCCGCCCGCGTTCCCTGCGGGCGCCCCCGTGCCGTGCCAAACGGCGCTGCCGG
TCGCCAGCGCCGGCGAGCACGCGAGCGGCTGGTGGGGCGTGGTCACGCTGATCGTCACCGAGGCCGGCCTGTTCGGCTAT
CTGCTGTTCTGCTATTTCTACCTGCAATCGCAGACCAGCGCCGTCTGGCCGCCGGAAGGCGCGCCGACCATCGCGCTACC
GGCCATCAACACCGCGGTGCTGCTGTCGAGCAGCGGCTGCGTGTGGCTGGCCGAACGCGCCGTGCGCGCCGGCCGCCGCC
GGCACGCGGTGACGATGCTGGTGCTCGCGCTCGCCCTCGGCACCGCGTTCGCGCTGGTGCAGCTGCACGAATGGCACGAG
CGTGGCTACGGTCCCGCCACGCATCTGTACGGCAGCCTCTATTTCACGATCACCGGATTCCATCTGGCCCACCTCTTCGC
CGGCCTGCTGATGCTGGCGCTGCTGGCCGTCTGCACCGGCCTGCGCGCGTTCGACGGCCACCGCCACGCCGCGCTGACGA
TCGGCGCGCTCTACTGGCATTTCGTCGACCTGGTCTGGCTGGTCATTTTCGCCGCCCTGACGCTCGCGCCCTGGTGGCAG
AGGCACGCGGGATGA

Upstream 100 bases:

>100_bases
CAGCAGCTCAAGCCCGGCAGCGCGATGCCGTCGATCGCGCTCGACGCCGGCGACGCCGATGCGCTGGCCGCCTATCTCGC
CACCCTGCACTGAGCCGCCG

Downstream 100 bases:

>100_bases
AGCCGTCCATCCGATGCCGTGCGCGGTGGCGGCGCTGGATGCCGGTGGCGGCCGGCCTGCTCGGCGCGCCCGCGCTCTGG
AGCCTGCAGATGCTGGGCTC

Product: cytochrome c oxidase subunit I

Products: NA

Alternate protein names: Caa-3605 subunit 1; Cytochrome aa3 subunit 1; Cytochrome c oxidase polypeptide I; Oxidase aa(3) subunit 1 [H]

Number of amino acids: Translated: 884; Mature: 883

Protein sequence:

>884_residues
MPPRPATATATATATRPPPLARRPELDAITPDSAEARALAQLWESPPGLRGWLATVDHKRIGLRYIVTAFAFLLAGGAEA
LVMRVQLARPEASVLTPQQYDALFTMHGVTMIFLYALPVLSGFANYLWPLMLGSRDMAFPRLNAFSYWSFLGAGLFLYAS
FPLGAAPDAGWFNYVPLASLDYSRGVNLDIYAIGMILLGISTTGGAANFIVTLLRMRAHGMSVDRLPIIVWGTLTASVAN
LLAVPSVSLAFFLLWMDRNAGTHFFDVARDGRPLLWQHLFWMFAHPWVYVVVLPAMGIVSDALPTFCRRPLVAYEAVAVS
TVATMLVGFEVWVHHMFATGIAPLALAFFGAASMLISIPSAVAVFAWIATIWTGRPVFRTPFLYFAGFVLMFTVGGVSGV
MTAAVPLDWQLTDTYFVVAHLHYVLLGINVFPVLGGITYWFPKFTGRLMNERFGRATFWVIAIGFNLGFFPMHVSGLLGM
PRRIYTYPAGMGWNTSNLLSTIGAFVFGAGTLMFVANALVSARRGRRAGANPWRAPGLEWSVPSPAPVYNFATLPLIGSR
HPMWEPADAARRSSLQVGYRLHEGREALAVTPLAARPDAILKMPADSAVPFVLASLATLLGAALLVRSPTLAALAAAGCA
AALGFWLWPRDSLGQRARAGAPARQAAPESRAAARLPPAFPAGAPVPCQTALPVASAGEHASGWWGVVTLIVTEAGLFGY
LLFCYFYLQSQTSAVWPPEGAPTIALPAINTAVLLSSSGCVWLAERAVRAGRRRHAVTMLVLALALGTAFALVQLHEWHE
RGYGPATHLYGSLYFTITGFHLAHLFAGLLMLALLAVCTGLRAFDGHRHAALTIGALYWHFVDLVWLVIFAALTLAPWWQ
RHAG

Sequences:

>Translated_884_residues
MPPRPATATATATATRPPPLARRPELDAITPDSAEARALAQLWESPPGLRGWLATVDHKRIGLRYIVTAFAFLLAGGAEA
LVMRVQLARPEASVLTPQQYDALFTMHGVTMIFLYALPVLSGFANYLWPLMLGSRDMAFPRLNAFSYWSFLGAGLFLYAS
FPLGAAPDAGWFNYVPLASLDYSRGVNLDIYAIGMILLGISTTGGAANFIVTLLRMRAHGMSVDRLPIIVWGTLTASVAN
LLAVPSVSLAFFLLWMDRNAGTHFFDVARDGRPLLWQHLFWMFAHPWVYVVVLPAMGIVSDALPTFCRRPLVAYEAVAVS
TVATMLVGFEVWVHHMFATGIAPLALAFFGAASMLISIPSAVAVFAWIATIWTGRPVFRTPFLYFAGFVLMFTVGGVSGV
MTAAVPLDWQLTDTYFVVAHLHYVLLGINVFPVLGGITYWFPKFTGRLMNERFGRATFWVIAIGFNLGFFPMHVSGLLGM
PRRIYTYPAGMGWNTSNLLSTIGAFVFGAGTLMFVANALVSARRGRRAGANPWRAPGLEWSVPSPAPVYNFATLPLIGSR
HPMWEPADAARRSSLQVGYRLHEGREALAVTPLAARPDAILKMPADSAVPFVLASLATLLGAALLVRSPTLAALAAAGCA
AALGFWLWPRDSLGQRARAGAPARQAAPESRAAARLPPAFPAGAPVPCQTALPVASAGEHASGWWGVVTLIVTEAGLFGY
LLFCYFYLQSQTSAVWPPEGAPTIALPAINTAVLLSSSGCVWLAERAVRAGRRRHAVTMLVLALALGTAFALVQLHEWHE
RGYGPATHLYGSLYFTITGFHLAHLFAGLLMLALLAVCTGLRAFDGHRHAALTIGALYWHFVDLVWLVIFAALTLAPWWQ
RHAG
>Mature_883_residues
PPRPATATATATATRPPPLARRPELDAITPDSAEARALAQLWESPPGLRGWLATVDHKRIGLRYIVTAFAFLLAGGAEAL
VMRVQLARPEASVLTPQQYDALFTMHGVTMIFLYALPVLSGFANYLWPLMLGSRDMAFPRLNAFSYWSFLGAGLFLYASF
PLGAAPDAGWFNYVPLASLDYSRGVNLDIYAIGMILLGISTTGGAANFIVTLLRMRAHGMSVDRLPIIVWGTLTASVANL
LAVPSVSLAFFLLWMDRNAGTHFFDVARDGRPLLWQHLFWMFAHPWVYVVVLPAMGIVSDALPTFCRRPLVAYEAVAVST
VATMLVGFEVWVHHMFATGIAPLALAFFGAASMLISIPSAVAVFAWIATIWTGRPVFRTPFLYFAGFVLMFTVGGVSGVM
TAAVPLDWQLTDTYFVVAHLHYVLLGINVFPVLGGITYWFPKFTGRLMNERFGRATFWVIAIGFNLGFFPMHVSGLLGMP
RRIYTYPAGMGWNTSNLLSTIGAFVFGAGTLMFVANALVSARRGRRAGANPWRAPGLEWSVPSPAPVYNFATLPLIGSRH
PMWEPADAARRSSLQVGYRLHEGREALAVTPLAARPDAILKMPADSAVPFVLASLATLLGAALLVRSPTLAALAAAGCAA
ALGFWLWPRDSLGQRARAGAPARQAAPESRAAARLPPAFPAGAPVPCQTALPVASAGEHASGWWGVVTLIVTEAGLFGYL
LFCYFYLQSQTSAVWPPEGAPTIALPAINTAVLLSSSGCVWLAERAVRAGRRRHAVTMLVLALALGTAFALVQLHEWHER
GYGPATHLYGSLYFTITGFHLAHLFAGLLMLALLAVCTGLRAFDGHRHAALTIGALYWHFVDLVWLVIFAALTLAPWWQR
HAG

Specific function: Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Co I is the catalytic subunit of the enzyme. Electrons originating in cytochrome

COG id: COG0843

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heme-copper respiratory oxidase family [H]

Homologues:

Organism=Homo sapiens, GI251831109, Length=503, Percent_Identity=36.5805168986084, Blast_Score=306, Evalue=5e-83,
Organism=Homo sapiens, GI251831113, Length=152, Percent_Identity=30.9210526315789, Blast_Score=82, Evalue=2e-15,
Organism=Escherichia coli, GI1786634, Length=597, Percent_Identity=36.5159128978224, Blast_Score=384, Evalue=1e-107,
Organism=Saccharomyces cerevisiae, GI6226519, Length=531, Percent_Identity=35.7815442561205, Blast_Score=325, Evalue=1e-89,
Organism=Saccharomyces cerevisiae, GI6226524, Length=325, Percent_Identity=36, Blast_Score=216, Evalue=2e-56,
Organism=Saccharomyces cerevisiae, GI6226523, Length=247, Percent_Identity=35.2226720647773, Blast_Score=134, Evalue=6e-32,
Organism=Saccharomyces cerevisiae, GI6226542, Length=185, Percent_Identity=27.027027027027, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000883
- InterPro:   IPR014241 [H]

Pfam domain/function: PF00115 COX1 [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 95712; Mature: 95581

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: PS50855 COX1 ; PS50253 COX3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPRPATATATATATRPPPLARRPELDAITPDSAEARALAQLWESPPGLRGWLATVDHKR
CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHCHHH
IGLRYIVTAFAFLLAGGAEALVMRVQLARPEASVLTPQQYDALFTMHGVTMIFLYALPVL
HHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SGFANYLWPLMLGSRDMAFPRLNAFSYWSFLGAGLFLYASFPLGAAPDAGWFNYVPLASL
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
DYSRGVNLDIYAIGMILLGISTTGGAANFIVTLLRMRAHGMSVDRLPIIVWGTLTASVAN
CCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHH
LLAVPSVSLAFFLLWMDRNAGTHFFDVARDGRPLLWQHLFWMFAHPWVYVVVLPAMGIVS
HHHCCHHHHHHHHHHEECCCCCCEEECCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHH
DALPTFCRRPLVAYEAVAVSTVATMLVGFEVWVHHMFATGIAPLALAFFGAASMLISIPS
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVAVFAWIATIWTGRPVFRTPFLYFAGFVLMFTVGGVSGVMTAAVPLDWQLTDTYFVVAH
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEECHHHHHHHH
LHYVLLGINVFPVLGGITYWFPKFTGRLMNERFGRATFWVIAIGFNLGFFPMHVSGLLGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHCC
PRRIYTYPAGMGWNTSNLLSTIGAFVFGAGTLMFVANALVSARRGRRAGANPWRAPGLEW
CCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
SVPSPAPVYNFATLPLIGSRHPMWEPADAARRSSLQVGYRLHEGREALAVTPLAARPDAI
CCCCCCCCCCCEECCEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCE
LKMPADSAVPFVLASLATLLGAALLVRSPTLAALAAAGCAAALGFWLWPRDSLGQRARAG
EECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHCCHHHCC
APARQAAPESRAAARLPPAFPAGAPVPCQTALPVASAGEHASGWWGVVTLIVTEAGLFGY
CCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LLFCYFYLQSQTSAVWPPEGAPTIALPAINTAVLLSSSGCVWLAERAVRAGRRRHAVTML
HHHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEECCCCHHHHHHHHHCCHHHHHHHHH
VLALALGTAFALVQLHEWHERGYGPATHLYGSLYFTITGFHLAHLFAGLLMLALLAVCTG
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHC
LRAFDGHRHAALTIGALYWHFVDLVWLVIFAALTLAPWWQRHAG
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PPRPATATATATATRPPPLARRPELDAITPDSAEARALAQLWESPPGLRGWLATVDHKR
CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHCHHH
IGLRYIVTAFAFLLAGGAEALVMRVQLARPEASVLTPQQYDALFTMHGVTMIFLYALPVL
HHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SGFANYLWPLMLGSRDMAFPRLNAFSYWSFLGAGLFLYASFPLGAAPDAGWFNYVPLASL
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
DYSRGVNLDIYAIGMILLGISTTGGAANFIVTLLRMRAHGMSVDRLPIIVWGTLTASVAN
CCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHH
LLAVPSVSLAFFLLWMDRNAGTHFFDVARDGRPLLWQHLFWMFAHPWVYVVVLPAMGIVS
HHHCCHHHHHHHHHHEECCCCCCEEECCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHH
DALPTFCRRPLVAYEAVAVSTVATMLVGFEVWVHHMFATGIAPLALAFFGAASMLISIPS
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVAVFAWIATIWTGRPVFRTPFLYFAGFVLMFTVGGVSGVMTAAVPLDWQLTDTYFVVAH
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEECHHHHHHHH
LHYVLLGINVFPVLGGITYWFPKFTGRLMNERFGRATFWVIAIGFNLGFFPMHVSGLLGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHCC
PRRIYTYPAGMGWNTSNLLSTIGAFVFGAGTLMFVANALVSARRGRRAGANPWRAPGLEW
CCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
SVPSPAPVYNFATLPLIGSRHPMWEPADAARRSSLQVGYRLHEGREALAVTPLAARPDAI
CCCCCCCCCCCEECCEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCE
LKMPADSAVPFVLASLATLLGAALLVRSPTLAALAAAGCAAALGFWLWPRDSLGQRARAG
EECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHCCHHHCC
APARQAAPESRAAARLPPAFPAGAPVPCQTALPVASAGEHASGWWGVVTLIVTEAGLFGY
CCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LLFCYFYLQSQTSAVWPPEGAPTIALPAINTAVLLSSSGCVWLAERAVRAGRRRHAVTML
HHHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEECCCCHHHHHHHHHCCHHHHHHHHH
VLALALGTAFALVQLHEWHERGYGPATHLYGSLYFTITGFHLAHLFAGLLMLALLAVCTG
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHC
LRAFDGHRHAALTIGALYWHFVDLVWLVIFAALTLAPWWQRHAG
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1847686; 9384377 [H]