| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027107
Identifier: 238027107
GI number: 238027107
Start: 1642221
End: 1642604
Strand: Reverse
Name: 238027107
Synonym: bglu_1g14870
Alternate gene names: NA
Gene position: 1642604-1642221 (Counterclockwise)
Preceding gene: 238027108
Following gene: 238027106
Centisome position: 42.05
GC content: 75.52
Gene sequence:
>384_bases ATGAAGCCGTCCATCCGATGCCGTGCGCGGTGGCGGCGCTGGATGCCGGTGGCGGCCGGCCTGCTCGGCGCGCCCGCGCT CTGGAGCCTGCAGATGCTGGGCTCGCAGACGCTGGCCGCCACCGTCTGCGACGCGCACGGTCCGGGGCCGGCGCTCGCGC AGCGGCTGCCGTTCGGCGCCGCGCTGGCCGGGCTGGCCGCCGTCGCGTGGGTGCTGGCGCTCGGCTGCACCGCCTGGGTC GCGCGAGCGGTGTGGCGCGGCGAGCGCGACGGCAGCCGGCGGTTTCTCGCGCGATGCGGGCTGCTGGCCGCGCTCGGCTT CGTTGCCGGACTCGTATTTACCGGCATGGTGTCTCGCTTCGTTGCACCCTGCCTGCCATGGTGA
Upstream 100 bases:
>100_bases CGCTGACGATCGGCGCGCTCTACTGGCATTTCGTCGACCTGGTCTGGCTGGTCATTTTCGCCGCCCTGACGCTCGCGCCC TGGTGGCAGAGGCACGCGGG
Downstream 100 bases:
>100_bases GGCACACCCTACCCGGCACCGGGCCGCTGGCACGGATCGCGACCGCCTGGCTCGCGGCGGGCGCACTGTTCGGCTGCCAT CAGCCGGCACCGCCCGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MKPSIRCRARWRRWMPVAAGLLGAPALWSLQMLGSQTLAATVCDAHGPGPALAQRLPFGAALAGLAAVAWVLALGCTAWV ARAVWRGERDGSRRFLARCGLLAALGFVAGLVFTGMVSRFVAPCLPW
Sequences:
>Translated_127_residues MKPSIRCRARWRRWMPVAAGLLGAPALWSLQMLGSQTLAATVCDAHGPGPALAQRLPFGAALAGLAAVAWVLALGCTAWV ARAVWRGERDGSRRFLARCGLLAALGFVAGLVFTGMVSRFVAPCLPW >Mature_127_residues MKPSIRCRARWRRWMPVAAGLLGAPALWSLQMLGSQTLAATVCDAHGPGPALAQRLPFGAALAGLAAVAWVLALGCTAWV ARAVWRGERDGSRRFLARCGLLAALGFVAGLVFTGMVSRFVAPCLPW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13471; Mature: 13471
Theoretical pI: Translated: 12.15; Mature: 12.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPSIRCRARWRRWMPVAAGLLGAPALWSLQMLGSQTLAATVCDAHGPGPALAQRLPFGA CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHH ALAGLAAVAWVLALGCTAWVARAVWRGERDGSRRFLARCGLLAALGFVAGLVFTGMVSRF HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAPCLPW HHHCCCC >Mature Secondary Structure MKPSIRCRARWRRWMPVAAGLLGAPALWSLQMLGSQTLAATVCDAHGPGPALAQRLPFGA CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHH ALAGLAAVAWVLALGCTAWVARAVWRGERDGSRRFLARCGLLAALGFVAGLVFTGMVSRF HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAPCLPW HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA