| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is adhB [H]
Identifier: 238027106
GI number: 238027106
Start: 1640884
End: 1642227
Strand: Reverse
Name: adhB [H]
Synonym: bglu_1g14860
Alternate gene names: 238027106
Gene position: 1642227-1640884 (Counterclockwise)
Preceding gene: 238027107
Following gene: 238027102
Centisome position: 42.04
GC content: 75.0
Gene sequence:
>1344_bases ATGGTGAGGCACACCCTACCCGGCACCGGGCCGCTGGCACGGATCGCGACCGCCTGGCTCGCGGCGGGCGCACTGTTCGG CTGCCATCAGCCGGCACCGCCCGCCGAGCCGGTCGAGCCGGCCGCTGCGAGCGCGCCGGCGGCCCTCATCGAGCGCGGCC GCTACCTGGCAACGGCGGCCGACTGCGCGGCCTGCCACGACGGCGCCGAGCACCAGCCGCTGGCCGGCGGCCTGCCCGTC AATTCCCCGTTCGGGCCGATCTACGCGCCCAACCTCACGCCCGACCCGGTGCACGGCATCGGCCGCTACACCTACGAGCA GTTCGATGCCGCGTTGCGACGCGGCGTGCGCGCGGACGGCGCGCGCCTCTATCCGGCCATGCCTTACGCGTCCTATGCCA AGCTCGACGACGCCGACACCCGGGCGCTGTACGCCTATCTGATGCACGGCGTGACGCCGTCGTCGAACGCGGTCCGCGCC ACGCGGCTGCCGTTCCCGTTCGACCAGCGCTGGGGCCTGGCCGTCTGGAGCGCGCTGTTCGGCAATCACGCGCGGTTCGT GCCGTCGCCCGCGCACTCGGCCGCATGGAACCGCGGCGCCTATCTGGTGCAGGGTGCGGGCCATTGCGGCGCCTGCCATA CGCCGCGCGGCCCGGCCTACAACGAGCGCGGCTACGACGAGCACAGCCGCGCCTATCTCACGGGCGGACTCAACGACCAC TGGTTCGCGCCGAACCTGACGGGAGCGCCGCGCGACGGCCTCGGCCGCTGGTCGGCCGACGACATCGCGGGGTTCCTCGC GACGGGGCACGCTCGTGGCGGTGCCGCGTTCGGCGCGATGGCGCCGGTGGTGACCGACAGCACCTCACGCCTGACCGACG GCGATCGCCGGGCCATCGCGGTCTACCTGAAGTCGTTGCCTGCGCAACCGACTGCCGCGACCAACCCGTTCGGCATCGGC CTGCCTCGCGCGGTGCCCGCCGGCCCGGCCGGGGCCGGCGGCAGGCAACTGCCCGGCGCGGGCCTGTACGCGAGCTTCTG CGCGCGCTGCCACGGCACCGACGGCGGCGGTCGCGGCAGCCAGGTGCCGCCGCTGGCCGGCAACCCGGTCGTCGTCGCGG ACGACGCGACCAGCGCGATACGCATCGTGGTCGAGGGCTACACCCCGCCGCCCGGCTCACCCGGCCCGGCGGCGGACTCG CGCGCGATGCCGGCGATGGCCGGCAAGCTCTCGTCGGACGAGATCGCCGAGGTGCTGAGCTTCGTGCGCGGGGCATGGGG GAATCGCGCCGCGCCGGTCGCCACGCGCGAGGTTCAGGCGCTGCGCGCGGCGATCCACCGCTGA
Upstream 100 bases:
>100_bases GGCGGTTTCTCGCGCGATGCGGGCTGCTGGCCGCGCTCGGCTTCGTTGCCGGACTCGTATTTACCGGCATGGTGTCTCGC TTCGTTGCACCCTGCCTGCC
Downstream 100 bases:
>100_bases AGGCACGCGCGGCTCATCCGGCCGCGCCGCCGGGCGGCTCGGCCGCGGCCGAGCTGGCATCGCGCGGCAGGCGTACCGTG AAGCGCGTGCCGCGCGCATC
Product: cytochrome c, class I
Products: NA
Alternate protein names: Cytochrome c-553; Cytochrome c553; G3-ADH subunit II [H]
Number of amino acids: Translated: 447; Mature: 447
Protein sequence:
>447_residues MVRHTLPGTGPLARIATAWLAAGALFGCHQPAPPAEPVEPAAASAPAALIERGRYLATAADCAACHDGAEHQPLAGGLPV NSPFGPIYAPNLTPDPVHGIGRYTYEQFDAALRRGVRADGARLYPAMPYASYAKLDDADTRALYAYLMHGVTPSSNAVRA TRLPFPFDQRWGLAVWSALFGNHARFVPSPAHSAAWNRGAYLVQGAGHCGACHTPRGPAYNERGYDEHSRAYLTGGLNDH WFAPNLTGAPRDGLGRWSADDIAGFLATGHARGGAAFGAMAPVVTDSTSRLTDGDRRAIAVYLKSLPAQPTAATNPFGIG LPRAVPAGPAGAGGRQLPGAGLYASFCARCHGTDGGGRGSQVPPLAGNPVVVADDATSAIRIVVEGYTPPPGSPGPAADS RAMPAMAGKLSSDEIAEVLSFVRGAWGNRAAPVATREVQALRAAIHR
Sequences:
>Translated_447_residues MVRHTLPGTGPLARIATAWLAAGALFGCHQPAPPAEPVEPAAASAPAALIERGRYLATAADCAACHDGAEHQPLAGGLPV NSPFGPIYAPNLTPDPVHGIGRYTYEQFDAALRRGVRADGARLYPAMPYASYAKLDDADTRALYAYLMHGVTPSSNAVRA TRLPFPFDQRWGLAVWSALFGNHARFVPSPAHSAAWNRGAYLVQGAGHCGACHTPRGPAYNERGYDEHSRAYLTGGLNDH WFAPNLTGAPRDGLGRWSADDIAGFLATGHARGGAAFGAMAPVVTDSTSRLTDGDRRAIAVYLKSLPAQPTAATNPFGIG LPRAVPAGPAGAGGRQLPGAGLYASFCARCHGTDGGGRGSQVPPLAGNPVVVADDATSAIRIVVEGYTPPPGSPGPAADS RAMPAMAGKLSSDEIAEVLSFVRGAWGNRAAPVATREVQALRAAIHR >Mature_447_residues MVRHTLPGTGPLARIATAWLAAGALFGCHQPAPPAEPVEPAAASAPAALIERGRYLATAADCAACHDGAEHQPLAGGLPV NSPFGPIYAPNLTPDPVHGIGRYTYEQFDAALRRGVRADGARLYPAMPYASYAKLDDADTRALYAYLMHGVTPSSNAVRA TRLPFPFDQRWGLAVWSALFGNHARFVPSPAHSAAWNRGAYLVQGAGHCGACHTPRGPAYNERGYDEHSRAYLTGGLNDH WFAPNLTGAPRDGLGRWSADDIAGFLATGHARGGAAFGAMAPVVTDSTSRLTDGDRRAIAVYLKSLPAQPTAATNPFGIG LPRAVPAGPAGAGGRQLPGAGLYASFCARCHGTDGGGRGSQVPPLAGNPVVVADDATSAIRIVVEGYTPPPGSPGPAADS RAMPAMAGKLSSDEIAEVLSFVRGAWGNRAAPVATREVQALRAAIHR
Specific function: Dehydration of primary alcohols (exception:methanol) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein; Periplasmic side (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 3 cytochrome c domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009056 - InterPro: IPR003088 - InterPro: IPR008168 - InterPro: IPR014353 [H]
Pfam domain/function: PF00034 Cytochrom_C [H]
EC number: NA
Molecular weight: Translated: 46302; Mature: 46302
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRHTLPGTGPLARIATAWLAAGALFGCHQPAPPAEPVEPAAASAPAALIERGRYLATAA CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCHHHHHCCCEEEHHH DCAACHDGAEHQPLAGGLPVNSPFGPIYAPNLTPDPVHGIGRYTYEQFDAALRRGVRADG HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC ARLYPAMPYASYAKLDDADTRALYAYLMHGVTPSSNAVRATRLPFPFDQRWGLAVWSALF CEECCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHH GNHARFVPSPAHSAAWNRGAYLVQGAGHCGACHTPRGPAYNERGYDEHSRAYLTGGLNDH CCCCCCCCCCCHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC WFAPNLTGAPRDGLGRWSADDIAGFLATGHARGGAAFGAMAPVVTDSTSRLTDGDRRAIA CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHCCCEECCCHHCCCCCHHHHH VYLKSLPAQPTAATNPFGIGLPRAVPAGPAGAGGRQLPGAGLYASFCARCHGTDGGGRGS HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC QVPPLAGNPVVVADDATSAIRIVVEGYTPPPGSPGPAADSRAMPAMAGKLSSDEIAEVLS CCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHH FVRGAWGNRAAPVATREVQALRAAIHR HHHCCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MVRHTLPGTGPLARIATAWLAAGALFGCHQPAPPAEPVEPAAASAPAALIERGRYLATAA CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCHHHHHCCCEEEHHH DCAACHDGAEHQPLAGGLPVNSPFGPIYAPNLTPDPVHGIGRYTYEQFDAALRRGVRADG HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC ARLYPAMPYASYAKLDDADTRALYAYLMHGVTPSSNAVRATRLPFPFDQRWGLAVWSALF CEECCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHH GNHARFVPSPAHSAAWNRGAYLVQGAGHCGACHTPRGPAYNERGYDEHSRAYLTGGLNDH CCCCCCCCCCCHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC WFAPNLTGAPRDGLGRWSADDIAGFLATGHARGGAAFGAMAPVVTDSTSRLTDGDRRAIA CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHCCCEECCCHHCCCCCHHHHH VYLKSLPAQPTAATNPFGIGLPRAVPAGPAGAGGRQLPGAGLYASFCARCHGTDGGGRGS HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC QVPPLAGNPVVVADDATSAIRIVVEGYTPPPGSPGPAADSRAMPAMAGKLSSDEIAEVLS CCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHH FVRGAWGNRAAPVATREVQALRAAIHR HHHCCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9055427 [H]