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The map label for this gene is yfbE [C]

Identifier: 238027032

GI number: 238027032

Start: 1551885

End: 1553036

Strand: Reverse

Name: yfbE [C]

Synonym: bglu_1g14100

Alternate gene names: 238027032

Gene position: 1553036-1551885 (Counterclockwise)

Preceding gene: 238027033

Following gene: 238027031

Centisome position: 39.76

GC content: 67.97

Gene sequence:

>1152_bases
ATGAGCCAGACATCCGTGCCGTTTTTGCCGTTCGTCAAACCCGAGATCGACGAGGAAACCATCCAGGGCGTGGTCGACGT
GCTGCGTTCGGGCTGGATCACCACCGGCCCGCAGAACCAGCGTTTCGAGGCCGCGCTGTCCGAGTACTGCGGCGGCCGGC
CGGTACGGACCTTCAACTCGGGCACCGCGACGCTCGAGATCGGACTGCGCATCGCCGGGGTCGGTCCCGGCGACGAAGTG
ATCACCACCCCCGCGAGCTGGGTCGCCACCAGCAACGTGATCATCGAGACGGGCGCCACGCCGGTGTTCGTCGATATCGA
TCCGGCCACGCGCAACCTCGATCTCGACGCCCTCGAGCGCGCGATCACGCCGCGCACCAAGGCCTTGATCCCGGTCTATC
TGGGCGGCCTGCCGGTCGACATGGATCGCCTCTACGCGATCGCGCGCGAGCACCGGCTGCGCGTGATCGAGGATGCCGCG
CAGGCGCTCGGCGCCTCGTGGCACGGCAAGCGGATCGGCGCGTTCGGCGATCTGGTCTCGTTCAGCTTCCACGCCAACAA
GAACATCACCTCGATCGAGGGCGGCGCGCTGGTGCTCAACGACGAGGACGAGGCGCTGCTGGCGCAGAAATACCGGCTGC
AGGGCATCACGCGCACCGGCTTCGACGGGATGGACTGCGACCTGCTCGGCGGCAAGTACAATCTCACCGATGTCGCGGCC
CGCGTCGGCCTCGGCCAGCTCGAGAAGATCGAGCGCTTCACGGCACAGCGCCGCGCGCTCGCCCGCGCCTACTTCGAGGG
GTTCGCGGGCGGTCCCGCGGCGGCGCTCGGCGTCGGGCTGCCGCTGGCCGACTTCGCGAACAGCAACTGGCACATGTTCC
AGATCACGCTGCCGCTCGAGCGGCTCACGCTCAGCCGCGCCGAATTCATGGCGCAGTTGAAGGAGCGCGGGATCGGCTCG
GGGGTGCATTACCCGGCGATCCACCTGTTCACGCTGTACCGTGCGCGCGGCTTCCGCGGGGGGATGTTCCCGCACGCCGA
GCGCTTCGGCGCCTCGACCGTCACGCTGCCGCTGTTCACGCTGATGAGCGGGGACGACGTGACGCGCGTGGTCGACGCCG
TCAACCAGATTTGCGAACGATACGGAAAATAA

Upstream 100 bases:

>100_bases
CCAACAAAAAGAGACGTTGTAATCTCGCGAACCAGTGTCTAATGCGCATGGCGGATCGGCCCTGATCCCGCCCCTTTCGA
CACCTACCCAGCCAGCCGCC

Downstream 100 bases:

>100_bases
GCGGAAATGACTCACCCTGAACCACGCGCCACGAACCCGGAAGTCTCGATCGTCATCCCCGTGTACAACGAGGAAGACGG
GCTCGCCGCGCTCTTCGCCC

Product: DegT/DnrJ/EryC1/StrS aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 382

Protein sequence:

>383_residues
MSQTSVPFLPFVKPEIDEETIQGVVDVLRSGWITTGPQNQRFEAALSEYCGGRPVRTFNSGTATLEIGLRIAGVGPGDEV
ITTPASWVATSNVIIETGATPVFVDIDPATRNLDLDALERAITPRTKALIPVYLGGLPVDMDRLYAIAREHRLRVIEDAA
QALGASWHGKRIGAFGDLVSFSFHANKNITSIEGGALVLNDEDEALLAQKYRLQGITRTGFDGMDCDLLGGKYNLTDVAA
RVGLGQLEKIERFTAQRRALARAYFEGFAGGPAAALGVGLPLADFANSNWHMFQITLPLERLTLSRAEFMAQLKERGIGS
GVHYPAIHLFTLYRARGFRGGMFPHAERFGASTVTLPLFTLMSGDDVTRVVDAVNQICERYGK

Sequences:

>Translated_383_residues
MSQTSVPFLPFVKPEIDEETIQGVVDVLRSGWITTGPQNQRFEAALSEYCGGRPVRTFNSGTATLEIGLRIAGVGPGDEV
ITTPASWVATSNVIIETGATPVFVDIDPATRNLDLDALERAITPRTKALIPVYLGGLPVDMDRLYAIAREHRLRVIEDAA
QALGASWHGKRIGAFGDLVSFSFHANKNITSIEGGALVLNDEDEALLAQKYRLQGITRTGFDGMDCDLLGGKYNLTDVAA
RVGLGQLEKIERFTAQRRALARAYFEGFAGGPAAALGVGLPLADFANSNWHMFQITLPLERLTLSRAEFMAQLKERGIGS
GVHYPAIHLFTLYRARGFRGGMFPHAERFGASTVTLPLFTLMSGDDVTRVVDAVNQICERYGK
>Mature_382_residues
SQTSVPFLPFVKPEIDEETIQGVVDVLRSGWITTGPQNQRFEAALSEYCGGRPVRTFNSGTATLEIGLRIAGVGPGDEVI
TTPASWVATSNVIIETGATPVFVDIDPATRNLDLDALERAITPRTKALIPVYLGGLPVDMDRLYAIAREHRLRVIEDAAQ
ALGASWHGKRIGAFGDLVSFSFHANKNITSIEGGALVLNDEDEALLAQKYRLQGITRTGFDGMDCDLLGGKYNLTDVAAR
VGLGQLEKIERFTAQRRALARAYFEGFAGGPAAALGVGLPLADFANSNWHMFQITLPLERLTLSRAEFMAQLKERGIGSG
VHYPAIHLFTLYRARGFRGGMFPHAERFGASTVTLPLFTLMSGDDVTRVVDAVNQICERYGK

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=381, Percent_Identity=41.2073490813648, Blast_Score=254, Evalue=9e-69,
Organism=Escherichia coli, GI2367285, Length=330, Percent_Identity=33.6363636363636, Blast_Score=162, Evalue=3e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 41644; Mature: 41513

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQTSVPFLPFVKPEIDEETIQGVVDVLRSGWITTGPQNQRFEAALSEYCGGRPVRTFNS
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEEECC
GTATLEIGLRIAGVGPGDEVITTPASWVATSNVIIETGATPVFVDIDPATRNLDLDALER
CCEEEEEEEEEEECCCCCCEEECCHHHHEECCEEEECCCCEEEEECCCCCCCCCHHHHHH
AITPRTKALIPVYLGGLPVDMDRLYAIAREHRLRVIEDAAQALGASWHGKRIGAFGDLVS
HCCCCHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHE
FSFHANKNITSIEGGALVLNDEDEALLAQKYRLQGITRTGFDGMDCDLLGGKYNLTDVAA
EEEECCCCCEEECCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHH
RVGLGQLEKIERFTAQRRALARAYFEGFAGGPAAALGVGLPLADFANSNWHMFQITLPLE
HHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHCCCCEEEEEEEECHH
RLTLSRAEFMAQLKERGIGSGVHYPAIHLFTLYRARGFRGGMFPHAERFGASTVTLPLFT
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCEEHHHHHH
LMSGDDVTRVVDAVNQICERYGK
HHCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SQTSVPFLPFVKPEIDEETIQGVVDVLRSGWITTGPQNQRFEAALSEYCGGRPVRTFNS
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEEECC
GTATLEIGLRIAGVGPGDEVITTPASWVATSNVIIETGATPVFVDIDPATRNLDLDALER
CCEEEEEEEEEEECCCCCCEEECCHHHHEECCEEEECCCCEEEEECCCCCCCCCHHHHHH
AITPRTKALIPVYLGGLPVDMDRLYAIAREHRLRVIEDAAQALGASWHGKRIGAFGDLVS
HCCCCHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHE
FSFHANKNITSIEGGALVLNDEDEALLAQKYRLQGITRTGFDGMDCDLLGGKYNLTDVAA
EEEECCCCCEEECCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHH
RVGLGQLEKIERFTAQRRALARAYFEGFAGGPAAALGVGLPLADFANSNWHMFQITLPLE
HHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHCCCCEEEEEEEECHH
RLTLSRAEFMAQLKERGIGSGVHYPAIHLFTLYRARGFRGGMFPHAERFGASTVTLPLFT
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCEEHHHHHH
LMSGDDVTRVVDAVNQICERYGK
HHCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]