Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is ylaK [H]
Identifier: 238027026
GI number: 238027026
Start: 1545285
End: 1547096
Strand: Reverse
Name: ylaK [H]
Synonym: bglu_1g14040
Alternate gene names: 238027026
Gene position: 1547096-1545285 (Counterclockwise)
Preceding gene: 238027027
Following gene: 238027025
Centisome position: 39.6
GC content: 67.83
Gene sequence:
>1812_bases ATGCCTTTGCCTACTCCCCCCAGCAAGCTCGGCAGCCTGCTGCCGCCCGACGAATACAAGGCGAAAGCGCGCCCCAGCCG CACCCCCAAGCGCGCCGCCGATGGGGACACGGCGACCGCCGCCGCGGCCGTAGCCGAATACGCCTCGCCTGCCAACGTCG CCGCTCCGATGGCTCCCGCCGCCAATGCTCCCGCCGCGCTGCACGCGGTGGCGCCGGCCGCGGCCGACGCCGCGACGACG TCCGGCACGCGGTCGCGCAAGTCGCGCCAGACCGCCGCGTTGCTGACGCCGGTGCAAGCGCCGGTGCCGGCCCGGCCCGA GGCACGTGCCGAAGCGCCGGTGGCCGCCGCCGCGCCGGCAGCGGCCGCCGGCGAAGCCGCGCGTGCCACACGCACGCGCA AGAAGGCCCCCGCCGTCGAACTGCAGAAGCTGTTCGTGCTGGACACGAACGTGCTGATGCACGACCCGAGCAGCCTGTTC CGCTTCGAGGAACACGACGTCTATCTGCCGATGATGACGCTCGAGGAACTCGACAACCACAAGAAGGGCATGTCGGAAGT GGCGCGCAACGCGCGTCAGGTGAGCCGCACGCTCGACGCGCTGGTGGCCGACGCCGGTCCGATCTCGGAGGGCATCGCAT TGTCGCGCCTGGGCAGCCGCGAGGCGCTCGGCCGGCTCTACTTCCAGACCACGCTGACCGACATCGAGCCGGTGGAAGGC CTGCCTCAGGGCAAGGCCGACAACCAGATCCTCGGCGTGGTGCGCGCGCTGCAGCGCGAGCGCACCGACCGCCTGGTCGT GCTGGTGTCGAAAGACATCAACATGCGCATCAAGGCGCATGCGCTTGGCCTGCCCGCCGAGGACTACTTCAACGATCAGG TGCTCGAGGACAAGGACCTCCTGTACTCGGGCGTGCGCGAGCTGCCGCAGGATTTCTGGACCAAGCACGCCAAGGGCATG GAGAGCTGGCAGGACACCAAGACCGGCACCACGTACTACCGCGTGACCGGCCCGCTGGTGGCCTCGATGCTCGTCAACGA GTTCCTCTATCTCGAGCCGCGCAACGGCGAGCCGACCTTCCACGCGATCGTGCGCGAGTTGAACGGCAAGACGGCGCTGC TGCAGACGCTGCGTGACTACAGCCACCACAAGAACAACGTGTGGGGCATCACGGCGCGCAACCGCGAGCAGAATTTCGCG CTGAACCTGCTGATGAACCCCGAGATCGACTTCGTCACGCTGCTCGGCCAGGCCGGCACCGGCAAGACGCTGGTCGCGCT CGCGGCGGGCCTCGCGCAGGTGCTCGACGACAAGCGCTACAACGAGATCATCGTCACGCGCGCGACGGTGCCGGTGGGCG AGGACATCGGCTTCCTGCCGGGGACCGAGGAAGAGAAGATGCAGCCGTGGATGGGCGCCTTCGACGACAATCTCGAGGTG CTGCAGAAGACCGACGACGCGGCCGGCGAATGGGGGCGCGCCGCCACCCAGGAACTGATCCGCTCGCGGCTCAAGGTCAA GAGCATGAACTTCATGCGCGGGCGCACTTTCGTCGACAAGTACGTGATTATCGACGAGGCGCAAAACCTGACGCCGAAGC AGATGAAGACGCTCGTCACGCGTGCCGGCCCCGGTACGAAGATCGTCTGCCTCGGCAATATCGCGCAGATCGATACGCCT TATTTGACCGAGGGCAGCTCGGGGCTGACGTACGTGGTGGACCGCTTCAAGGGCTGGGGGCACAGCGGACATGTGACGCT GGCTCGGGGCGAGCGCTCGCGGCTGGCGGATTACGCGTCGGATATTCTGTGA
Upstream 100 bases:
>100_bases CACCCATGTGCGCCGCCGCGCGCAAACTGCACGTGCGAGCACGTGACAGGATGCGAACCGCGGCGCATTCCAAGCGACAC GATTCCTCCCGAGGGACACC
Downstream 100 bases:
>100_bases GTGGTTGTGCCGGATGGTTTGGTGGTTGAAAAAAGCGCCCCTTCGGGGGCGCTTTTTTTTGGGTCCGGCGGGGGGATTTT CACGGGGGATCATGGTGGGT
Product: PhoH-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 603; Mature: 602
Protein sequence:
>603_residues MPLPTPPSKLGSLLPPDEYKAKARPSRTPKRAADGDTATAAAAVAEYASPANVAAPMAPAANAPAALHAVAPAAADAATT SGTRSRKSRQTAALLTPVQAPVPARPEARAEAPVAAAAPAAAAGEAARATRTRKKAPAVELQKLFVLDTNVLMHDPSSLF RFEEHDVYLPMMTLEELDNHKKGMSEVARNARQVSRTLDALVADAGPISEGIALSRLGSREALGRLYFQTTLTDIEPVEG LPQGKADNQILGVVRALQRERTDRLVVLVSKDINMRIKAHALGLPAEDYFNDQVLEDKDLLYSGVRELPQDFWTKHAKGM ESWQDTKTGTTYYRVTGPLVASMLVNEFLYLEPRNGEPTFHAIVRELNGKTALLQTLRDYSHHKNNVWGITARNREQNFA LNLLMNPEIDFVTLLGQAGTGKTLVALAAGLAQVLDDKRYNEIIVTRATVPVGEDIGFLPGTEEEKMQPWMGAFDDNLEV LQKTDDAAGEWGRAATQELIRSRLKVKSMNFMRGRTFVDKYVIIDEAQNLTPKQMKTLVTRAGPGTKIVCLGNIAQIDTP YLTEGSSGLTYVVDRFKGWGHSGHVTLARGERSRLADYASDIL
Sequences:
>Translated_603_residues MPLPTPPSKLGSLLPPDEYKAKARPSRTPKRAADGDTATAAAAVAEYASPANVAAPMAPAANAPAALHAVAPAAADAATT SGTRSRKSRQTAALLTPVQAPVPARPEARAEAPVAAAAPAAAAGEAARATRTRKKAPAVELQKLFVLDTNVLMHDPSSLF RFEEHDVYLPMMTLEELDNHKKGMSEVARNARQVSRTLDALVADAGPISEGIALSRLGSREALGRLYFQTTLTDIEPVEG LPQGKADNQILGVVRALQRERTDRLVVLVSKDINMRIKAHALGLPAEDYFNDQVLEDKDLLYSGVRELPQDFWTKHAKGM ESWQDTKTGTTYYRVTGPLVASMLVNEFLYLEPRNGEPTFHAIVRELNGKTALLQTLRDYSHHKNNVWGITARNREQNFA LNLLMNPEIDFVTLLGQAGTGKTLVALAAGLAQVLDDKRYNEIIVTRATVPVGEDIGFLPGTEEEKMQPWMGAFDDNLEV LQKTDDAAGEWGRAATQELIRSRLKVKSMNFMRGRTFVDKYVIIDEAQNLTPKQMKTLVTRAGPGTKIVCLGNIAQIDTP YLTEGSSGLTYVVDRFKGWGHSGHVTLARGERSRLADYASDIL >Mature_602_residues PLPTPPSKLGSLLPPDEYKAKARPSRTPKRAADGDTATAAAAVAEYASPANVAAPMAPAANAPAALHAVAPAAADAATTS GTRSRKSRQTAALLTPVQAPVPARPEARAEAPVAAAAPAAAAGEAARATRTRKKAPAVELQKLFVLDTNVLMHDPSSLFR FEEHDVYLPMMTLEELDNHKKGMSEVARNARQVSRTLDALVADAGPISEGIALSRLGSREALGRLYFQTTLTDIEPVEGL PQGKADNQILGVVRALQRERTDRLVVLVSKDINMRIKAHALGLPAEDYFNDQVLEDKDLLYSGVRELPQDFWTKHAKGME SWQDTKTGTTYYRVTGPLVASMLVNEFLYLEPRNGEPTFHAIVRELNGKTALLQTLRDYSHHKNNVWGITARNREQNFAL NLLMNPEIDFVTLLGQAGTGKTLVALAAGLAQVLDDKRYNEIIVTRATVPVGEDIGFLPGTEEEKMQPWMGAFDDNLEVL QKTDDAAGEWGRAATQELIRSRLKVKSMNFMRGRTFVDKYVIIDEAQNLTPKQMKTLVTRAGPGTKIVCLGNIAQIDTPY LTEGSSGLTYVVDRFKGWGHSGHVTLARGERSRLADYASDIL
Specific function: Unknown
COG id: COG1875
COG function: function code T; Predicted ATPase related to phosphate starvation-inducible protein PhoH
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PINc domain [H]
Homologues:
Organism=Escherichia coli, GI1787257, Length=191, Percent_Identity=36.6492146596859, Blast_Score=104, Evalue=2e-23, Organism=Escherichia coli, GI145693103, Length=167, Percent_Identity=37.125748502994, Blast_Score=90, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 - InterPro: IPR006596 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 65643; Mature: 65512
Theoretical pI: Translated: 7.86; Mature: 7.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLPTPPSKLGSLLPPDEYKAKARPSRTPKRAADGDTATAAAAVAEYASPANVAAPMAPA CCCCCCHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC ANAPAALHAVAPAAADAATTSGTRSRKSRQTAALLTPVQAPVPARPEARAEAPVAAAAPA CCCCHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCC AAAGEAARATRTRKKAPAVELQKLFVLDTNVLMHDPSSLFRFEEHDVYLPMMTLEELDNH HHCCHHHHHHHHHHCCCHHHHHHHHEEECCEEEECCHHHHEECCCCEEEHHHHHHHHHHH KKGMSEVARNARQVSRTLDALVADAGPISEGIALSRLGSREALGRLYFQTTLTDIEPVEG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCC LPQGKADNQILGVVRALQRERTDRLVVLVSKDINMRIKAHALGLPAEDYFNDQVLEDKDL CCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEEECCCHHHHCCCCCCCHHHH LYSGVRELPQDFWTKHAKGMESWQDTKTGTTYYRVTGPLVASMLVNEFLYLEPRNGEPTF HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHEEEECCCCCHHH HAIVRELNGKTALLQTLRDYSHHKNNVWGITARNREQNFALNLLMNPEIDFVTLLGQAGT HHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEECCCCCEEEEECCCCC GKTLVALAAGLAQVLDDKRYNEIIVTRATVPVGEDIGFLPGTEEEKMQPWMGAFDDNLEV CHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHCCCHHCCCCCCHHH LQKTDDAAGEWGRAATQELIRSRLKVKSMNFMRGRTFVDKYVIIDEAQNLTPKQMKTLVT HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEEECCCCCCHHHHHHHHH RAGPGTKIVCLGNIAQIDTPYLTEGSSGLTYVVDRFKGWGHSGHVTLARGERSRLADYAS CCCCCCEEEEECCHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHH DIL HCC >Mature Secondary Structure PLPTPPSKLGSLLPPDEYKAKARPSRTPKRAADGDTATAAAAVAEYASPANVAAPMAPA CCCCCHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC ANAPAALHAVAPAAADAATTSGTRSRKSRQTAALLTPVQAPVPARPEARAEAPVAAAAPA CCCCHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCC AAAGEAARATRTRKKAPAVELQKLFVLDTNVLMHDPSSLFRFEEHDVYLPMMTLEELDNH HHCCHHHHHHHHHHCCCHHHHHHHHEEECCEEEECCHHHHEECCCCEEEHHHHHHHHHHH KKGMSEVARNARQVSRTLDALVADAGPISEGIALSRLGSREALGRLYFQTTLTDIEPVEG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCC LPQGKADNQILGVVRALQRERTDRLVVLVSKDINMRIKAHALGLPAEDYFNDQVLEDKDL CCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEEECCCHHHHCCCCCCCHHHH LYSGVRELPQDFWTKHAKGMESWQDTKTGTTYYRVTGPLVASMLVNEFLYLEPRNGEPTF HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHEEEECCCCCHHH HAIVRELNGKTALLQTLRDYSHHKNNVWGITARNREQNFALNLLMNPEIDFVTLLGQAGT HHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEECCCCCEEEEECCCCC GKTLVALAAGLAQVLDDKRYNEIIVTRATVPVGEDIGFLPGTEEEKMQPWMGAFDDNLEV CHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHCCCHHCCCCCCHHH LQKTDDAAGEWGRAATQELIRSRLKVKSMNFMRGRTFVDKYVIIDEAQNLTPKQMKTLVT HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEEECCCCCCHHHHHHHHH RAGPGTKIVCLGNIAQIDTPYLTEGSSGLTYVVDRFKGWGHSGHVTLARGERSRLADYAS CCCCCCEEEEECCHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHH DIL HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]