| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is pgi [H]
Identifier: 238026982
GI number: 238026982
Start: 1493985
End: 1495607
Strand: Reverse
Name: pgi [H]
Synonym: bglu_1g13590
Alternate gene names: 238026982
Gene position: 1495607-1493985 (Counterclockwise)
Preceding gene: 238026983
Following gene: 238026980
Centisome position: 38.29
GC content: 68.45
Gene sequence:
>1623_bases ATGACGCTGAATTCGCTCCCCGCTTGGCCTGCCCTCCAATCGCACTACGACGAGATCCGCGACGCGCAGCTGCGCGACTG GTTTGCCGCCGGCAATGATCCGGCCCCGACGCGCGCCGAACGCTTCACGTTCAGCGGCGGCGGGCTTGCGATCGACTTCT CGAAGAACCGCATCACCGACGCCACGCTGACGCTGCTCGTGCAGCTCGCGCGCGAGGCCGGCGTCGAGGCGCGTCGCGAC GCGATGTTCGCCGGCGACGTGGTGAACCCGACCGAAGGCCGCGCCGCCCTGCACACCGCGCTGCGCGCGAGCGCGCCCGA TGCGCCGTTCCACGCGCAGGTGCTGGCCGAGCGCAGCAAGATGGCCGCCTTCGCCGAGCAGGTGCGTGACGGCCGCTGGA CCGGCTACACCGGCAAACGCATCCGCCACGTGATCAACATCGGCATCGGGGGCTCCGATCTCGGGCCGAAGATGGTGGTG CACGCGCTCGACCATCTCGCCACGCGCGAGCTGTCGTGCGCCTTCGTCTCGAACGTGGACGGCGCCGACCTGTCGCGCGC GCTCGAATTCTGCGATCCCGAGCAAACGCTCGTCATCGTGGTGTCGAAGACCTTCACGACGCTCGAGACCATGACCAACG CACGCTCGGCGCGCGACTGGCTGATCTCGCACGGCTGCCCCGAGAACGCGCTCGCCAAGCACTTCGTCGGCGTGTCGGCG AATCCCGGCGAAGTCGTGAAGTTCGGCATCGACGCCCACAACGTGTTCGAGATGTGGGACTGGGTCGGCGGGCGCTACTC GCTGTGGTCGGCGGTGGGCCTGTCGATCATGATCGCGATCGGGCCGCAGCAGTTCGACGAGCTGCTGGCCGGCGCCAACG AGATGGACACGCACTTTCGCGAGGCGCCGCTCGAATCGAACCTGCCGGTGCTGCTCGGCCTGATCGGCATCTGGTATCGC AACTTCTTCGGCTCGCAGAGCTACCTGGTGGCGCCGTATTCCGAGGCGCTGCACTTCCTGCCGTCGTACCTGCAGCAGCT GGAAATGGAGAGCAACGGCAAATCGGCGCGGCTCGACGGCGCGTTCGTCGACTACCCGACCTCGGCCGTGACCTGGGGCG AGCCCGGCACCAACGGCCAGCACGCGTTCTTCCAGATGCTGCACCAGGGCCCGACGATCGTGCCGATCGACTTCATCGCG GTGCTCAAGCCCGAGCATGCGCTGGCGAGCCACCATCCGAAGCTGCTCGCGAACTGCTTCGCGCAGAGCGAGGCGCTGAT GCTCGGCCGCACGCTCGAGGAGGCGCGCAGGATCGCCGGCCCGGACAAGCCCGAACTCGCGCCGCACCTGACGTTCCCCG GCAACCGGCCGAGCTCCACGATCCTCGTCGAGGCGCTCACGGCGCGCGCGCTGGGCGCGCTGATCGCGCTCTACGAGCAC AAGGTGCTGGTGCAGGCCTCGATCTGGAACATCAATCCGTTCGACCAGTGGGGCGTGGAGCTCGGCAAGATTCTCGGCAA GGTGGTCGAGGCCGACCTGAACGCCGCGAGCGTCGATGCGGGCAAGCACGATTCGTCGACCTCGGCGCTGATCGCGCGGG CGCGCGCCGCGCTCGAGCGCTGA
Upstream 100 bases:
>100_bases CCGAGAGGGCTCGCGCGCGGTTTCCGCGGTCCCCCGGCGTCCGGCGCCGGGCGCGATCCCGTCCTCGCCCCCGAATCACG CTAGCTTCGCCCGAACCGAT
Downstream 100 bases:
>100_bases GCGGCGCGCGTCGCAAAACGGCAGGATGACCGGCCGTTCTCGTTTCGCCGCTGCGGTGGCGCGGCGCGGGTCGCGACGGC TCAGCTCGCGCTGCGCTCGG
Product: glucose-6-phosphate isomerase
Products: NA
Alternate protein names: GPI; Phosphoglucose isomerase; PGI; Phosphohexose isomerase; PHI [H]
Number of amino acids: Translated: 540; Mature: 539
Protein sequence:
>540_residues MTLNSLPAWPALQSHYDEIRDAQLRDWFAAGNDPAPTRAERFTFSGGGLAIDFSKNRITDATLTLLVQLAREAGVEARRD AMFAGDVVNPTEGRAALHTALRASAPDAPFHAQVLAERSKMAAFAEQVRDGRWTGYTGKRIRHVINIGIGGSDLGPKMVV HALDHLATRELSCAFVSNVDGADLSRALEFCDPEQTLVIVVSKTFTTLETMTNARSARDWLISHGCPENALAKHFVGVSA NPGEVVKFGIDAHNVFEMWDWVGGRYSLWSAVGLSIMIAIGPQQFDELLAGANEMDTHFREAPLESNLPVLLGLIGIWYR NFFGSQSYLVAPYSEALHFLPSYLQQLEMESNGKSARLDGAFVDYPTSAVTWGEPGTNGQHAFFQMLHQGPTIVPIDFIA VLKPEHALASHHPKLLANCFAQSEALMLGRTLEEARRIAGPDKPELAPHLTFPGNRPSSTILVEALTARALGALIALYEH KVLVQASIWNINPFDQWGVELGKILGKVVEADLNAASVDAGKHDSSTSALIARARAALER
Sequences:
>Translated_540_residues MTLNSLPAWPALQSHYDEIRDAQLRDWFAAGNDPAPTRAERFTFSGGGLAIDFSKNRITDATLTLLVQLAREAGVEARRD AMFAGDVVNPTEGRAALHTALRASAPDAPFHAQVLAERSKMAAFAEQVRDGRWTGYTGKRIRHVINIGIGGSDLGPKMVV HALDHLATRELSCAFVSNVDGADLSRALEFCDPEQTLVIVVSKTFTTLETMTNARSARDWLISHGCPENALAKHFVGVSA NPGEVVKFGIDAHNVFEMWDWVGGRYSLWSAVGLSIMIAIGPQQFDELLAGANEMDTHFREAPLESNLPVLLGLIGIWYR NFFGSQSYLVAPYSEALHFLPSYLQQLEMESNGKSARLDGAFVDYPTSAVTWGEPGTNGQHAFFQMLHQGPTIVPIDFIA VLKPEHALASHHPKLLANCFAQSEALMLGRTLEEARRIAGPDKPELAPHLTFPGNRPSSTILVEALTARALGALIALYEH KVLVQASIWNINPFDQWGVELGKILGKVVEADLNAASVDAGKHDSSTSALIARARAALER >Mature_539_residues TLNSLPAWPALQSHYDEIRDAQLRDWFAAGNDPAPTRAERFTFSGGGLAIDFSKNRITDATLTLLVQLAREAGVEARRDA MFAGDVVNPTEGRAALHTALRASAPDAPFHAQVLAERSKMAAFAEQVRDGRWTGYTGKRIRHVINIGIGGSDLGPKMVVH ALDHLATRELSCAFVSNVDGADLSRALEFCDPEQTLVIVVSKTFTTLETMTNARSARDWLISHGCPENALAKHFVGVSAN PGEVVKFGIDAHNVFEMWDWVGGRYSLWSAVGLSIMIAIGPQQFDELLAGANEMDTHFREAPLESNLPVLLGLIGIWYRN FFGSQSYLVAPYSEALHFLPSYLQQLEMESNGKSARLDGAFVDYPTSAVTWGEPGTNGQHAFFQMLHQGPTIVPIDFIAV LKPEHALASHHPKLLANCFAQSEALMLGRTLEEARRIAGPDKPELAPHLTFPGNRPSSTILVEALTARALGALIALYEHK VLVQASIWNINPFDQWGVELGKILGKVVEADLNAASVDAGKHDSSTSALIARARAALER
Specific function: Involved in glycolysis and in gluconeogenesis. [C]
COG id: COG0166
COG function: function code G; Glucose-6-phosphate isomerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GPI family [H]
Homologues:
Organism=Homo sapiens, GI18201905, Length=540, Percent_Identity=48.1481481481481, Blast_Score=503, Evalue=1e-142, Organism=Homo sapiens, GI296080693, Length=540, Percent_Identity=44.2592592592593, Blast_Score=446, Evalue=1e-125, Organism=Escherichia coli, GI1790457, Length=543, Percent_Identity=49.9079189686924, Blast_Score=510, Evalue=1e-146, Organism=Caenorhabditis elegans, GI71996708, Length=551, Percent_Identity=46.0980036297641, Blast_Score=479, Evalue=1e-135, Organism=Caenorhabditis elegans, GI71996703, Length=551, Percent_Identity=46.0980036297641, Blast_Score=479, Evalue=1e-135, Organism=Saccharomyces cerevisiae, GI6319673, Length=542, Percent_Identity=46.6789667896679, Blast_Score=498, Evalue=1e-142, Organism=Drosophila melanogaster, GI24651916, Length=550, Percent_Identity=47.8181818181818, Blast_Score=502, Evalue=1e-142, Organism=Drosophila melanogaster, GI24651914, Length=550, Percent_Identity=47.8181818181818, Blast_Score=502, Evalue=1e-142, Organism=Drosophila melanogaster, GI17737445, Length=550, Percent_Identity=47.8181818181818, Blast_Score=502, Evalue=1e-142,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001672 - InterPro: IPR023096 - InterPro: IPR018189 [H]
Pfam domain/function: PF00342 PGI [H]
EC number: =5.3.1.9 [H]
Molecular weight: Translated: 58813; Mature: 58682
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: PS00765 P_GLUCOSE_ISOMERASE_1 ; PS00174 P_GLUCOSE_ISOMERASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLNSLPAWPALQSHYDEIRDAQLRDWFAAGNDPAPTRAERFTFSGGGLAIDFSKNRITD CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEECCCCEEEEECCCCCHH ATLTLLVQLAREAGVEARRDAMFAGDVVNPTEGRAALHTALRASAPDAPFHAQVLAERSK HHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHH MAAFAEQVRDGRWTGYTGKRIRHVINIGIGGSDLGPKMVVHALDHLATRELSCAFVSNVD HHHHHHHHHCCCCCCCCHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCC GADLSRALEFCDPEQTLVIVVSKTFTTLETMTNARSARDWLISHGCPENALAKHFVGVSA CHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC NPGEVVKFGIDAHNVFEMWDWVGGRYSLWSAVGLSIMIAIGPQQFDELLAGANEMDTHFR CCCCEEEEECCHHHHHHHHHHCCCCHHHHHHHCCEEEEEECHHHHHHHHCCCCHHHHHHH EAPLESNLPVLLGLIGIWYRNFFGSQSYLVAPYSEALHFLPSYLQQLEMESNGKSARLDG HCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCEEECC AFVDYPTSAVTWGEPGTNGQHAFFQMLHQGPTIVPIDFIAVLKPEHALASHHPKLLANCF CEEECCCCEEECCCCCCCCHHHHHHHHHCCCCEEEEHHHHHCCCCHHHHHCCHHHHHHHH AQSEALMLGRTLEEARRIAGPDKPELAPHLTFPGNRPSSTILVEALTARALGALIALYEH HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC KVLVQASIWNINPFDQWGVELGKILGKVVEADLNAASVDAGKHDSSTSALIARARAALER EEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure TLNSLPAWPALQSHYDEIRDAQLRDWFAAGNDPAPTRAERFTFSGGGLAIDFSKNRITD CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEECCCCEEEEECCCCCHH ATLTLLVQLAREAGVEARRDAMFAGDVVNPTEGRAALHTALRASAPDAPFHAQVLAERSK HHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHH MAAFAEQVRDGRWTGYTGKRIRHVINIGIGGSDLGPKMVVHALDHLATRELSCAFVSNVD HHHHHHHHHCCCCCCCCHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCC GADLSRALEFCDPEQTLVIVVSKTFTTLETMTNARSARDWLISHGCPENALAKHFVGVSA CHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC NPGEVVKFGIDAHNVFEMWDWVGGRYSLWSAVGLSIMIAIGPQQFDELLAGANEMDTHFR CCCCEEEEECCHHHHHHHHHHCCCCHHHHHHHCCEEEEEECHHHHHHHHCCCCHHHHHHH EAPLESNLPVLLGLIGIWYRNFFGSQSYLVAPYSEALHFLPSYLQQLEMESNGKSARLDG HCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCEEECC AFVDYPTSAVTWGEPGTNGQHAFFQMLHQGPTIVPIDFIAVLKPEHALASHHPKLLANCF CEEECCCCEEECCCCCCCCHHHHHHHHHCCCCEEEEHHHHHCCCCHHHHHCCHHHHHHHH AQSEALMLGRTLEEARRIAGPDKPELAPHLTFPGNRPSSTILVEALTARALGALIALYEH HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC KVLVQASIWNINPFDQWGVELGKILGKVVEADLNAASVDAGKHDSSTSALIARARAALER EEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA