| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026967
Identifier: 238026967
GI number: 238026967
Start: 1475114
End: 1476004
Strand: Direct
Name: 238026967
Synonym: bglu_1g13440
Alternate gene names: NA
Gene position: 1475114-1476004 (Clockwise)
Preceding gene: 238026963
Following gene: 238026972
Centisome position: 37.76
GC content: 67.79
Gene sequence:
>891_bases ATGACCCCCGCCATTCGCCTGTTGCGTGCCTTGCTGCCGCTCATCCTGATGCCGTGCCTCACCCAGGGCCGCGCCGAGCC GCTCGACGCGGATCTGCACGAATCCGTCGTCACGCTCGACGTGGCAGTCAAGGATTTCTACGGCAGGAAGGAAACCGGCA GGCTCGCCGTCACGCAGTTCATGCCGGACGGCGACGGCCCGTTTCCGATCCTGATTCTCAATCACGGACGCAGCGCAACG GATCGGAGCACGCCGCCGCGTTTCCGCTACACGCGGCAGGCGGCCTTTTTCGTCGAGCGCGGCTTCGCGGTGTTCGAGCC GACGCGCATCGGCTATGGCCGCTTCGGCACGCAGTTCGATCCCGAGTACAGCGGCAAGTGCAGCCAGAAGGATTACCAGC CGATGATCGATGCGGCCCGCATCGAGGAGCGTGCCGTGCTCGACTACGCGAGACGGCAGCCGCGGGTCGATCCGCATCGG ATCGTGATGGTGGGGCAATCGGTCGGCGGCTTCGTCACGACGGGCGTGGCCGCAGACAATCCCGACGGCCTGGTGGCCGC GGTCAATTTCGCGGGCGGTGCGGGGGGCGACCCTGTCGGGCATCCCGGCACACCGTGCCAGGGCGAGCGGCTGGAAGCGA TGTACGAGCGTTTCGGCAGCACGGCGCGCGTGCCGATGCTGTGGATCTATACCGAGAACGACCAGTACTTCGGCCCGAGC TACAGCCGGGCCTGGCATGCCGCGTTCGTCCGTGCCGGCGGCAAGGCCGACTATCGGCTGCTGCCGCCGTTCGGCGACAA CGGGCACCTGCTGTTTGCACGCGGCACCGGCATCTGGGAGCCCGTCGTGTCCGCCTTCCTCGTCCAGCAAGGGTTCCCGG TCCGGCCGTAG
Upstream 100 bases:
>100_bases GTGAGCCGCGTGCCGGACGGCGGCGCTGCGGGTAATATCTCGACGCCGGCGCGGCAACGGAAGCCGGCCGCCGACACGCC TCGCCCACGCTGAGCCGCCT
Downstream 100 bases:
>100_bases CAGTCTGCGCGGTGCATCGGCTGCCCCGCGCAGGCGCGGCAGCCTGCCCCGAGGCGTTCGGCTGCGTTGGCGCGAGTGTC GATGCGGTCCGCACGATCAC
Product: dienelactone hydrolase-like protein
Products: NA
Alternate protein names: Signal Peptide Protein; Dipeptidyl Aminopeptidase/Acylaminoacyl-Peptidase; Dienelactone Hydrolase And Related S-Like Protein; Dienelactone Hydrolase-Like; Acylamino-Acid-Releasing; Dipeptidyl; Dienelactone Hydrolase And Related S Protein; Subfamily S9C Unassigned Peptidase; Dienelactone Hydrolase-Like Protein; Lipoprotein
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MTPAIRLLRALLPLILMPCLTQGRAEPLDADLHESVVTLDVAVKDFYGRKETGRLAVTQFMPDGDGPFPILILNHGRSAT DRSTPPRFRYTRQAAFFVERGFAVFEPTRIGYGRFGTQFDPEYSGKCSQKDYQPMIDAARIEERAVLDYARRQPRVDPHR IVMVGQSVGGFVTTGVAADNPDGLVAAVNFAGGAGGDPVGHPGTPCQGERLEAMYERFGSTARVPMLWIYTENDQYFGPS YSRAWHAAFVRAGGKADYRLLPPFGDNGHLLFARGTGIWEPVVSAFLVQQGFPVRP
Sequences:
>Translated_296_residues MTPAIRLLRALLPLILMPCLTQGRAEPLDADLHESVVTLDVAVKDFYGRKETGRLAVTQFMPDGDGPFPILILNHGRSAT DRSTPPRFRYTRQAAFFVERGFAVFEPTRIGYGRFGTQFDPEYSGKCSQKDYQPMIDAARIEERAVLDYARRQPRVDPHR IVMVGQSVGGFVTTGVAADNPDGLVAAVNFAGGAGGDPVGHPGTPCQGERLEAMYERFGSTARVPMLWIYTENDQYFGPS YSRAWHAAFVRAGGKADYRLLPPFGDNGHLLFARGTGIWEPVVSAFLVQQGFPVRP >Mature_295_residues TPAIRLLRALLPLILMPCLTQGRAEPLDADLHESVVTLDVAVKDFYGRKETGRLAVTQFMPDGDGPFPILILNHGRSATD RSTPPRFRYTRQAAFFVERGFAVFEPTRIGYGRFGTQFDPEYSGKCSQKDYQPMIDAARIEERAVLDYARRQPRVDPHRI VMVGQSVGGFVTTGVAADNPDGLVAAVNFAGGAGGDPVGHPGTPCQGERLEAMYERFGSTARVPMLWIYTENDQYFGPSY SRAWHAAFVRAGGKADYRLLPPFGDNGHLLFARGTGIWEPVVSAFLVQQGFPVRP
Specific function: Unknown
COG id: COG0412
COG function: function code Q; Dienelactone hydrolase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32640; Mature: 32508
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPAIRLLRALLPLILMPCLTQGRAEPLDADLHESVVTLDVAVKDFYGRKETGRLAVTQF CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHEEEEEEHHHHHCCCCCCCCEEEEEE MPDGDGPFPILILNHGRSATDRSTPPRFRYTRQAAFFVERGFAVFEPTRIGYGRFGTQFD CCCCCCCEEEEEECCCCCCCCCCCCCCEEHHHHHHHHHHCCCEEECCCCCCCCCCCCCCC PEYSGKCSQKDYQPMIDAARIEERAVLDYARRQPRVDPHRIVMVGQSVGGFVTTGVAADN CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEECCCCCC PDGLVAAVNFAGGAGGDPVGHPGTPCQGERLEAMYERFGSTARVPMLWIYTENDQYFGPS CCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCC YSRAWHAAFVRAGGKADYRLLPPFGDNGHLLFARGTGIWEPVVSAFLVQQGFPVRP HHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TPAIRLLRALLPLILMPCLTQGRAEPLDADLHESVVTLDVAVKDFYGRKETGRLAVTQF CHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHEEEEEEHHHHHCCCCCCCCEEEEEE MPDGDGPFPILILNHGRSATDRSTPPRFRYTRQAAFFVERGFAVFEPTRIGYGRFGTQFD CCCCCCCEEEEEECCCCCCCCCCCCCCEEHHHHHHHHHHCCCEEECCCCCCCCCCCCCCC PEYSGKCSQKDYQPMIDAARIEERAVLDYARRQPRVDPHRIVMVGQSVGGFVTTGVAADN CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEECCCCCC PDGLVAAVNFAGGAGGDPVGHPGTPCQGERLEAMYERFGSTARVPMLWIYTENDQYFGPS CCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCC YSRAWHAAFVRAGGKADYRLLPPFGDNGHLLFARGTGIWEPVVSAFLVQQGFPVRP HHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA