| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is motA [H]
Identifier: 238026966
GI number: 238026966
Start: 1471401
End: 1472270
Strand: Reverse
Name: motA [H]
Synonym: bglu_1g13430
Alternate gene names: 238026966
Gene position: 1472270-1471401 (Counterclockwise)
Preceding gene: 238026968
Following gene: 238026965
Centisome position: 37.69
GC content: 62.99
Gene sequence:
>870_bases ATGTTCGTGGCAATTGGCTGGATCGTCGTGATCGGCTCGGTAATCGGCAGTTTCGTCGGCGTGGGGGGCCATCTTCCCGC CCTGATCCAGCCGTTCGAGCTGCTGTGTATCTTCGGCGCCGCGGCGGGAGCCTTCGTGGTCAGCAATCCGCGCGACACGC TGGTCAAGACGCTGAAGGCACTGCCCTCGTGCTTCAAGTCCAGCGGCTATACGAAGACGCAGTATCTGGAACTGATCGCG CTGTTGTACGAGGTGCTTCAGAAGGCTCGCCGCGAAGGCATGCTGTCGCTGGAATCCGACATCGAGAACCCGGCCAGCAG CGCCCTGTTTCAAAAGTACTCACACGTGCTCGCCGATCATCATCTGCTCGATTTCATCATCGATTATCTGCGCATGATGT CTACCGGCAACGTCAATCCTCTGGAGATGCAGGACCTGATGGACGAGGAACTCGGGACGCATCATGCGGAAATGTCCGTC GCCCCGTCCGCGATCCAGAAGATGGCGGACGGTCTGCCCGCATTCGGCATCGTCGCGGCGGTGATGGGCGTGGTCCACAC CATGGGTTCGGTCGGCGCGCCGCCGGCCGAACTCGGCAAGATGATCGCCGGCGCGCTCGTCGGGACGTTCCTCGGCATCC TGCTGGCCTATGGCTTCGTGGGACCGCTCGCCGATCTGCTCAACGCCAAGGGCCGCAGTTCCGCAAAGCCGTTCCAGTGC GTCAAGGCCGTGCTGCTCGCGTCCTTGAGCGGCTACGCGCCGGCAGTGGCCGTGGAGTTCGGCCGAAAGGTGCTGTTCAC GTCCGACCGGCCCAGCTTCCAGGAGCTGGACGAAGCCGTTCGTGCCACCAAGACCGTCAAGGCGGCCTGA
Upstream 100 bases:
>100_bases GTTGCACTGTCGCGCCTCAAGCATGCGGGACGCGGCGAAAAGAGGGCCGGCAATGTCGGTTCAGGCGTCAATCCGGGCAA TCAATCTAGTAGGAGTCCCT
Downstream 100 bases:
>100_bases GGAGACATCAGATGGCAACCGACAAGGCAGCCGAACAGGCGGCACGCAAGCTGGGCAGCGGCACGATCATCGTGCGGCGG GTGAAGCGTGATGCGCACGA
Product: flagellar motor component-like protein
Products: NA
Alternate protein names: Chemotaxis protein MotA [H]
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MFVAIGWIVVIGSVIGSFVGVGGHLPALIQPFELLCIFGAAAGAFVVSNPRDTLVKTLKALPSCFKSSGYTKTQYLELIA LLYEVLQKARREGMLSLESDIENPASSALFQKYSHVLADHHLLDFIIDYLRMMSTGNVNPLEMQDLMDEELGTHHAEMSV APSAIQKMADGLPAFGIVAAVMGVVHTMGSVGAPPAELGKMIAGALVGTFLGILLAYGFVGPLADLLNAKGRSSAKPFQC VKAVLLASLSGYAPAVAVEFGRKVLFTSDRPSFQELDEAVRATKTVKAA
Sequences:
>Translated_289_residues MFVAIGWIVVIGSVIGSFVGVGGHLPALIQPFELLCIFGAAAGAFVVSNPRDTLVKTLKALPSCFKSSGYTKTQYLELIA LLYEVLQKARREGMLSLESDIENPASSALFQKYSHVLADHHLLDFIIDYLRMMSTGNVNPLEMQDLMDEELGTHHAEMSV APSAIQKMADGLPAFGIVAAVMGVVHTMGSVGAPPAELGKMIAGALVGTFLGILLAYGFVGPLADLLNAKGRSSAKPFQC VKAVLLASLSGYAPAVAVEFGRKVLFTSDRPSFQELDEAVRATKTVKAA >Mature_289_residues MFVAIGWIVVIGSVIGSFVGVGGHLPALIQPFELLCIFGAAAGAFVVSNPRDTLVKTLKALPSCFKSSGYTKTQYLELIA LLYEVLQKARREGMLSLESDIENPASSALFQKYSHVLADHHLLDFIIDYLRMMSTGNVNPLEMQDLMDEELGTHHAEMSV APSAIQKMADGLPAFGIVAAVMGVVHTMGSVGAPPAELGKMIAGALVGTFLGILLAYGFVGPLADLLNAKGRSSAKPFQC VKAVLLASLSGYAPAVAVEFGRKVLFTSDRPSFQELDEAVRATKTVKAA
Specific function: MotA and MotB comprise the stator element of the flagellar motor complex. Required for rotation of the flagellar motor. Probable transmembrane proton channel. Overexpression of MotA, with or without MotB, restores motility in a yhjH disruption, (a c-di-GM
COG id: COG1291
COG function: function code N; Flagellar motor component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MotA family [H]
Homologues:
Organism=Escherichia coli, GI1788199, Length=285, Percent_Identity=54.0350877192982, Blast_Score=318, Evalue=3e-88,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000540 - InterPro: IPR022522 - InterPro: IPR002898 [H]
Pfam domain/function: PF01618 MotA_ExbB [H]
EC number: NA
Molecular weight: Translated: 30657; Mature: 30657
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: PS01307 MOTA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVAIGWIVVIGSVIGSFVGVGGHLPALIQPFELLCIFGAAAGAFVVSNPRDTLVKTLKA CEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHEECCCHHHHHHHHHH LPSCFKSSGYTKTQYLELIALLYEVLQKARREGMLSLESDIENPASSALFQKYSHVLADH HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHH HLLDFIIDYLRMMSTGNVNPLEMQDLMDEELGTHHAEMSVAPSAIQKMADGLPAFGIVAA HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHCCHHHHHHHHCCCCHHHHHHH VMGVVHTMGSVGAPPAELGKMIAGALVGTFLGILLAYGFVGPLADLLNAKGRSSAKPFQC HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH VKAVLLASLSGYAPAVAVEFGRKVLFTSDRPSFQELDEAVRATKTVKAA HHHHHHHHHCCCCHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFVAIGWIVVIGSVIGSFVGVGGHLPALIQPFELLCIFGAAAGAFVVSNPRDTLVKTLKA CEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHEECCCHHHHHHHHHH LPSCFKSSGYTKTQYLELIALLYEVLQKARREGMLSLESDIENPASSALFQKYSHVLADH HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHH HLLDFIIDYLRMMSTGNVNPLEMQDLMDEELGTHHAEMSVAPSAIQKMADGLPAFGIVAA HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHCCHHHHHHHHCCCCHHHHHHH VMGVVHTMGSVGAPPAELGKMIAGALVGTFLGILLAYGFVGPLADLLNAKGRSSAKPFQC HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH VKAVLLASLSGYAPAVAVEFGRKVLFTSDRPSFQELDEAVRATKTVKAA HHHHHHHHHCCCCHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 6090403; 9097040; 9278503; 3007435; 1719217; 7643400 [H]