| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026962
Identifier: 238026962
GI number: 238026962
Start: 1465651
End: 1467132
Strand: Direct
Name: 238026962
Synonym: bglu_1g13380
Alternate gene names: NA
Gene position: 1465651-1467132 (Clockwise)
Preceding gene: 238026961
Following gene: 238026963
Centisome position: 37.52
GC content: 70.45
Gene sequence:
>1482_bases ATGCATCGATCCGGAACCGTTGGGGACCCTGCCGGCGCGCGCCGGCCAGCTGCGATGCTCGCGCCGCTCGATGCGGACGA CGCGCGTTTCCTGCTCGAGCGCACCGGATTCTCGCCGACGCCGGCTGAATGGGCGCCCTATGTGGGCATGACGCGCGCGG CGGCCGTCGATGCGCTGCTGGCCGGCGCGCGGCGCGCCCCCGCGACGCCGCTGCCCGACTGGGCCGACGTACCGCTGCCG CCGCGAGCGGTGCGCAACGCCTGGACGCCCGACCAGCGCCGCGACGACCAGCGCCTGCAGGCCCAACGCTACGATGCGCT GCGCGCCTGGTGGCTGGGCGAGATGCTGACCACGCCGTCGCCGCTCGCCGAGCGCATGACGCTGTTCTGGCATCGCCATT TCACCTCGGGGCAGGACAAGGTGCCGTATCCGCGCACCATGGCCGCGCAGCACCGGCTGCTGCGCGCGCAGGCGCTCGGC AACTTCGGCACGATGCTGCACGCGGTCGCGATCGATCCGGCGATGCTGCAGTACCTCGACGGTGCGAGCAATCGCAAGGG ACGTCCCAACGAGAACTTCGCTCGCGAGGTGATGGAGCTGTTTACGCTCGGCGAAGGCCATTACACGCAGCACGACGTGA CCGACGCGGCCCGCGCGCTGACCGGCTGGGGGCTCGACGCCGATACGCTCGAAACCGTTTGGCATCCGAATCTTCACGAC GACGGCATCAAGACCGTGCTCGGCCAAACCGGCCCGCTCGATACCCGCGGGTTGCTCGACGTGCTGCTCGCCCAGCCCGG CACGGCCCGCTTCGTCGCCGCGAAGCTGTGGCGCGAGTTCGTTTCCGACACGCCGGAGCCTGCCGAGCTCGATACCGTGG CCGCGCGCTTTCGCGAAAGCGGCTACGAGATCGGCGCGGCGCTCGCAGCGCTGTTTTCCACCGATGCGTTCTGGAGCGAC GCGGTGCGCGGCGTGCACGCGAAGGCGCCGACCGAATTCGTGGTGGGTACGGTCCGCATGTTCGGACTCGACTACGGCGA CGCGGCGCAGTTCGTGCCGGTGCTGAACGTGCTCGGCGAGCGCCTGTTCGCACCGCCGAACGTGAAGGGCTGGCCGGGCG GCGCGCTCTGGATCAACAGCTCGACCTTGCTCGCGCGCAAGCAATTCGTGGAACGCATGTTTCGCTCGACGGCCTCTGGC TATCATGCGAAGCCGCCTGTGGCGGGCATGATGCGGGCCGCGGGCGGCAAGGCTGCCATGCCGGGCGCCGCGCCGCTCGC CAACGGCGCGATGCGCTTCGATCTCGACGGCTGGCTGGCGCGCTTCGGCGCGACGCCGCAGGCGCGGCCGACGCTGTCGA CCGAACTGCAGCTGCAGCACGCGGTGCTGCCGATCTCGCCGGTCGCCGCGATCGATGCCGATGCGAACGGCGCCGCGTAT CTGCGCGCGCTGCTGATGGACCCTGTCTATCAGTTGAGCTGA
Upstream 100 bases:
>100_bases ATGTCGCCGGCCGGCCCGTTGAGGAACGGGTAACGCGGTGCCGAGTCCGGCGTCGCGCTCGGAACGTCGATGGCCCGATC GGCCAGGGGAGGCACACGCG
Downstream 100 bases:
>100_bases GCCGGGTCGGGCGAGGCAGGCAGGGCCGCCCGGCGGGATGGGCGCAACGTGATGTGAACGAGATAGACGGTGATGAGGGT GGCACGATGAAACGACGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 493; Mature: 493
Protein sequence:
>493_residues MHRSGTVGDPAGARRPAAMLAPLDADDARFLLERTGFSPTPAEWAPYVGMTRAAAVDALLAGARRAPATPLPDWADVPLP PRAVRNAWTPDQRRDDQRLQAQRYDALRAWWLGEMLTTPSPLAERMTLFWHRHFTSGQDKVPYPRTMAAQHRLLRAQALG NFGTMLHAVAIDPAMLQYLDGASNRKGRPNENFAREVMELFTLGEGHYTQHDVTDAARALTGWGLDADTLETVWHPNLHD DGIKTVLGQTGPLDTRGLLDVLLAQPGTARFVAAKLWREFVSDTPEPAELDTVAARFRESGYEIGAALAALFSTDAFWSD AVRGVHAKAPTEFVVGTVRMFGLDYGDAAQFVPVLNVLGERLFAPPNVKGWPGGALWINSSTLLARKQFVERMFRSTASG YHAKPPVAGMMRAAGGKAAMPGAAPLANGAMRFDLDGWLARFGATPQARPTLSTELQLQHAVLPISPVAAIDADANGAAY LRALLMDPVYQLS
Sequences:
>Translated_493_residues MHRSGTVGDPAGARRPAAMLAPLDADDARFLLERTGFSPTPAEWAPYVGMTRAAAVDALLAGARRAPATPLPDWADVPLP PRAVRNAWTPDQRRDDQRLQAQRYDALRAWWLGEMLTTPSPLAERMTLFWHRHFTSGQDKVPYPRTMAAQHRLLRAQALG NFGTMLHAVAIDPAMLQYLDGASNRKGRPNENFAREVMELFTLGEGHYTQHDVTDAARALTGWGLDADTLETVWHPNLHD DGIKTVLGQTGPLDTRGLLDVLLAQPGTARFVAAKLWREFVSDTPEPAELDTVAARFRESGYEIGAALAALFSTDAFWSD AVRGVHAKAPTEFVVGTVRMFGLDYGDAAQFVPVLNVLGERLFAPPNVKGWPGGALWINSSTLLARKQFVERMFRSTASG YHAKPPVAGMMRAAGGKAAMPGAAPLANGAMRFDLDGWLARFGATPQARPTLSTELQLQHAVLPISPVAAIDADANGAAY LRALLMDPVYQLS >Mature_493_residues MHRSGTVGDPAGARRPAAMLAPLDADDARFLLERTGFSPTPAEWAPYVGMTRAAAVDALLAGARRAPATPLPDWADVPLP PRAVRNAWTPDQRRDDQRLQAQRYDALRAWWLGEMLTTPSPLAERMTLFWHRHFTSGQDKVPYPRTMAAQHRLLRAQALG NFGTMLHAVAIDPAMLQYLDGASNRKGRPNENFAREVMELFTLGEGHYTQHDVTDAARALTGWGLDADTLETVWHPNLHD DGIKTVLGQTGPLDTRGLLDVLLAQPGTARFVAAKLWREFVSDTPEPAELDTVAARFRESGYEIGAALAALFSTDAFWSD AVRGVHAKAPTEFVVGTVRMFGLDYGDAAQFVPVLNVLGERLFAPPNVKGWPGGALWINSSTLLARKQFVERMFRSTASG YHAKPPVAGMMRAAGGKAAMPGAAPLANGAMRFDLDGWLARFGATPQARPTLSTELQLQHAVLPISPVAAIDADANGAAY LRALLMDPVYQLS
Specific function: Unknown
COG id: COG5267
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53597; Mature: 53597
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRSGTVGDPAGARRPAAMLAPLDADDARFLLERTGFSPTPAEWAPYVGMTRAAAVDALL CCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH AGARRAPATPLPDWADVPLPPRAVRNAWTPDQRRDDQRLQAQRYDALRAWWLGEMLTTPS HCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC PLAERMTLFWHRHFTSGQDKVPYPRTMAAQHRLLRAQALGNFGTMLHAVAIDPAMLQYLD HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHC GASNRKGRPNENFAREVMELFTLGEGHYTQHDVTDAARALTGWGLDADTLETVWHPNLHD CCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCC DGIKTVLGQTGPLDTRGLLDVLLAQPGTARFVAAKLWREFVSDTPEPAELDTVAARFRES CHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC GYEIGAALAALFSTDAFWSDAVRGVHAKAPTEFVVGTVRMFGLDYGDAAQFVPVLNVLGE CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH RLFAPPNVKGWPGGALWINSSTLLARKQFVERMFRSTASGYHAKPPVAGMMRAAGGKAAM HHCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCC PGAAPLANGAMRFDLDGWLARFGATPQARPTLSTELQLQHAVLPISPVAAIDADANGAAY CCCCHHCCCCEEECHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCHHEECCCCCHHHH LRALLMDPVYQLS HHHHHHHHHHHCC >Mature Secondary Structure MHRSGTVGDPAGARRPAAMLAPLDADDARFLLERTGFSPTPAEWAPYVGMTRAAAVDALL CCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH AGARRAPATPLPDWADVPLPPRAVRNAWTPDQRRDDQRLQAQRYDALRAWWLGEMLTTPS HCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC PLAERMTLFWHRHFTSGQDKVPYPRTMAAQHRLLRAQALGNFGTMLHAVAIDPAMLQYLD HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHC GASNRKGRPNENFAREVMELFTLGEGHYTQHDVTDAARALTGWGLDADTLETVWHPNLHD CCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCC DGIKTVLGQTGPLDTRGLLDVLLAQPGTARFVAAKLWREFVSDTPEPAELDTVAARFRES CHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC GYEIGAALAALFSTDAFWSDAVRGVHAKAPTEFVVGTVRMFGLDYGDAAQFVPVLNVLGE CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH RLFAPPNVKGWPGGALWINSSTLLARKQFVERMFRSTASGYHAKPPVAGMMRAAGGKAAM HHCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCC PGAAPLANGAMRFDLDGWLARFGATPQARPTLSTELQLQHAVLPISPVAAIDADANGAAY CCCCHHCCCCEEECHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCHHEECCCCCHHHH LRALLMDPVYQLS HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA