| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026949
Identifier: 238026949
GI number: 238026949
Start: 1448008
End: 1448442
Strand: Reverse
Name: 238026949
Synonym: bglu_1g13240
Alternate gene names: NA
Gene position: 1448442-1448008 (Counterclockwise)
Preceding gene: 238026950
Following gene: 238026948
Centisome position: 37.08
GC content: 68.74
Gene sequence:
>435_bases ATGTCCTTTCCGAAAAAACGCCGACGCATGCAGCCGGACGGCCAGGAATCGTTCCTGGCCGTACTGCGTCACGCGAAGCC CTTCGCCCAGCTCGATACCAAGATCGCGCGCGCCCGCGCGCAGGACGAACCGGTGCTCTACGCGCACGTGCTGCCCGGAC TGGACGTGTTGCTCTGCACCGTGCGCGGTGCCCATCCGCCGTATCCGGCGATCGCCGACTTGCGCAGGCGCTGCGTGGAA TCGATCACCAACGCGCTCGAGCAGCCGCTCGACGGGCTCGAGAACGGCGGCTACTGGTACGAGGCGAACGGCTTCGGCTT CCTGGTGTTCGCGAGCCGCGCGCGAGGGCGCATCCTCCCCGAGTTCGGCGCGAATGCCGGCGAGCGCAGCGCGGGCCGGC AGAACGCCGGCGATACGACGCCGCGATCGCTGTAA
Upstream 100 bases:
>100_bases GTATGCTATAAAAGATCGACATGCGGGCGCGCTAGCCGGTTTGGGGGTGGGTCGCATGACAAAGCCACAAATCTTGCAAT CGTTTTTGACGCGAGTGTTT
Downstream 100 bases:
>100_bases GCCGGGCTGCTGCCGGGCCGGCGTCGCGCGCCGTGAATCGCGCGCCGGCGCTTGGCCCGGCCGTATCGCGCGGGCCGGAT CGAGACGGGCCGGATCGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MSFPKKRRRMQPDGQESFLAVLRHAKPFAQLDTKIARARAQDEPVLYAHVLPGLDVLLCTVRGAHPPYPAIADLRRRCVE SITNALEQPLDGLENGGYWYEANGFGFLVFASRARGRILPEFGANAGERSAGRQNAGDTTPRSL
Sequences:
>Translated_144_residues MSFPKKRRRMQPDGQESFLAVLRHAKPFAQLDTKIARARAQDEPVLYAHVLPGLDVLLCTVRGAHPPYPAIADLRRRCVE SITNALEQPLDGLENGGYWYEANGFGFLVFASRARGRILPEFGANAGERSAGRQNAGDTTPRSL >Mature_143_residues SFPKKRRRMQPDGQESFLAVLRHAKPFAQLDTKIARARAQDEPVLYAHVLPGLDVLLCTVRGAHPPYPAIADLRRRCVES ITNALEQPLDGLENGGYWYEANGFGFLVFASRARGRILPEFGANAGERSAGRQNAGDTTPRSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15918; Mature: 15787
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFPKKRRRMQPDGQESFLAVLRHAKPFAQLDTKIARARAQDEPVLYAHVLPGLDVLLCT CCCCHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEHHHCCHHHHHHH VRGAHPPYPAIADLRRRCVESITNALEQPLDGLENGGYWYEANGFGFLVFASRARGRILP HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCCCCCCH EFGANAGERSAGRQNAGDTTPRSL HHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SFPKKRRRMQPDGQESFLAVLRHAKPFAQLDTKIARARAQDEPVLYAHVLPGLDVLLCT CCCHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEHHHCCHHHHHHH VRGAHPPYPAIADLRRRCVESITNALEQPLDGLENGGYWYEANGFGFLVFASRARGRILP HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCCCCCCH EFGANAGERSAGRQNAGDTTPRSL HHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA