| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is ppsA [H]
Identifier: 238026920
GI number: 238026920
Start: 1412629
End: 1415031
Strand: Direct
Name: ppsA [H]
Synonym: bglu_1g12900
Alternate gene names: 238026920
Gene position: 1412629-1415031 (Clockwise)
Preceding gene: 238026918
Following gene: 238026921
Centisome position: 36.16
GC content: 65.58
Gene sequence:
>2403_bases ATGACTAACGCAGCAAACGTCGCAAAGGACCAGGCGTATGTAATCCCGTTCGAGCAGTTGCGGATGACCGATGTCGAGAT CGTGGGGGGCAAGAACGCTTCCCTCGGCGAGATGATCAGCCAGCTTTCCGAGGCAGGCGTGCGCGTTCCCACCGGGTTCG CCACGACGGCGCTCGCGTTCCGCGACTTCCTCGCCCATAACGATCTCACCGACCGCATCGCGAAACGCCTCGAGTCGCTC GATGTCGACGACGTGAAGTCGCTCGCCGTGGCGGGTGCCGAGATTCGCAAGTGGATCGTCGAGGCGCCGCTGCAGCCGCG GCTCGATGCCGAAATCCGCGAACAGTTCGAGGTGCTCTGCCAGAGCTCGCCCGAGGAGTTGTCGTTCGCGGTGCGTTCGT CGGCCACCGCCGAGGATCTGCCCGACGCGTCGTTCGCCGGCCAGCAGGAGTCCTACCTCAACGTGGTCGGCATCGACGAC GTGCTCGACCGCATGAAGCACGTGTTCGCGTCGCTCTATAACGACCGCGCGATTTCGTACCGCGTCCACAAGGGCTTCAC GCACGCCGAGGTCGCGCTGTCGGCCGGCGTGCAGCGCATGGTGCGCTCCGACGTCGGCGCGGCCGGCGTGATGTTTACGA TCGACACCGAATCGGGCTTCAAGGACGCCGTGTTCGTGACGTCGAGCTACGGCCTGGGCGAGACGGTGGTGCAGGGCGCC GTGAACCCCGACGAGTTCTACGTGTTCAAGACCACGCTCGCCCGGGACAAGCACCCGATCATCCGCCGCTCGATCGGCTC GAAGCTGATCAAGATGGAGTTCACGCAGCCGGGCGAGCCGGGCCGTGTGAAGACGGTCGACGTCGCACACGAGCAGCGCA ATCGCTACTCGATCACCGACGCCGACGTGATCGAGCTGGCCAAGTACGCCGTCATCATCGAGAAGCACTACCAGCGTCCG ATGGACATCGAGTGGGGCAAGGACGGCCGCGACGGCAAGATCTTCATCCTCCAGGCGCGCCCGGAAACCGTGAAGAGCCA GGCCAACGGCAAGGTCGAGCAGCGCTTCAAGCTGAAGGGCCAGTCGCAGGTGCTCGCCACCGGCCGCGCGATCGGCCAGA AGATCGGCGCCGGCCCGGTGCGCGTGATCCAGGACCCGTCGGAAATGGAGCGTGTGCAGCCCGGCGACGTGCTGGTGGCC GACATGACCGACCCGAACTGGGAGCCGGTGATGAAGCGCGCCTCGGCGATCGTCACGAACCGCGGCGGGCGCACCTGCCA CGCGGCGATCATCGCGCGCGAGTTGGGCGTGCCGGCGGTGGTCGGCTGCGGCGACGCGACCGACGTGCTGAAGGACGGGG CGCTCGTCACCGTGTCGTGCGCGGAGGGCGACGAAGGCAAGATCTACGACGGCCTGCTCGAGACCGAGGTGACGGAAGTC CAGCGCGGCGACCTGCCGGCCATCCCGGTCAAGATCATGATGAACGTCGGCAACCCGCAGCTCGCGTTCGACTTCTCGCA GTTGCCGAACGGCGGTGTCGGCCTGGCGCGGCTCGAGTTCATCATCAACAACAACATCGGCGTCCATCCGAAGGCGATCC TCGAGTATCCGAACATCGATTCGGACCTGAAGAAGGCGGTCGAGAGCGTCGCACGCGGTCATGCCTCGCCGCGCGCGTTC TACGTGGACAAGCTGACCGAAGGCATCGCCACGATCGGCGCGGCGTTCTATCCGAAGCCCGTGATCGTGCGCCTGTCCGA TTTCAAGTCGAACGAGTACAAGAAGCTGATCGGCGGCTCGCGCTACGAGCCGGACGAGGAAAATCCGATGCTCGGCTTCC GCGGCGCGTCGCGCTACATCGCCGACGACTTCGCGCAGGCCTTCGAGATGGAGTGCATGGCACTGAAGCGCGTGCGCGAC GAGATGGGCCTCACCAACGTCGAGATCATGGTGCCGTTCGTGCGTACCGTGAAGCAGGCCGAGCGCGTGGTGGGCCTGCT CGCGAAGTACGGCCTCAAGCGCGGCGAGAACGGCCTGCGCCTGATCATGATGTGCGAGGTGCCGTCCAACGCGATCCTGG CCGAGCAGTTCCTCGCGTATTTCGACGGCTTCTCGATCGGCTCGAACGACCTGACGCAGCTCACCCTCGGCCTCGACCGC GACTCGGGCATGGAACTGCTCGCCGTCGATTTCGACGAGCGCGATCCGGCCGTGAAGTTCATGCTCAAGCGCGCGATCGA CACCTGCCGGCGCCTCGGCAAGTACGTCGGCATCTGCGGCCAGGGCCCGTCCGATCATCCGGACTTCGCGCAGTGGCTGA CCGAGGAGGGCATCGAGTCGATCTCGCTGAACCCCGATACGGTCATCGAGACCTGGCAGGCGCTCGCGAAGACGCAGAAG TAA
Upstream 100 bases:
>100_bases TATCCAACAGGTCGCGCGATGCACGCCCCGCCTTTTGCAAGCGGCCGTGCGTCAAGCCCAATCGCGCGATCGTGAATTTT TTTCACACTTAGGGGCTTGT
Downstream 100 bases:
>100_bases GCGGGCCTGCCCCGGCGGCTGCGCGAGACCGGCTGCGGCGAGCGGCGTTTTGCCGTTACGTGCGGTTGCCGGCCGCCGGC GCCCCGATTCGTGCACGACA
Product: phosphoenolpyruvate synthase
Products: NA
Alternate protein names: PEP synthase; Pyruvate, water dikinase [H]
Number of amino acids: Translated: 800; Mature: 799
Protein sequence:
>800_residues MTNAANVAKDQAYVIPFEQLRMTDVEIVGGKNASLGEMISQLSEAGVRVPTGFATTALAFRDFLAHNDLTDRIAKRLESL DVDDVKSLAVAGAEIRKWIVEAPLQPRLDAEIREQFEVLCQSSPEELSFAVRSSATAEDLPDASFAGQQESYLNVVGIDD VLDRMKHVFASLYNDRAISYRVHKGFTHAEVALSAGVQRMVRSDVGAAGVMFTIDTESGFKDAVFVTSSYGLGETVVQGA VNPDEFYVFKTTLARDKHPIIRRSIGSKLIKMEFTQPGEPGRVKTVDVAHEQRNRYSITDADVIELAKYAVIIEKHYQRP MDIEWGKDGRDGKIFILQARPETVKSQANGKVEQRFKLKGQSQVLATGRAIGQKIGAGPVRVIQDPSEMERVQPGDVLVA DMTDPNWEPVMKRASAIVTNRGGRTCHAAIIARELGVPAVVGCGDATDVLKDGALVTVSCAEGDEGKIYDGLLETEVTEV QRGDLPAIPVKIMMNVGNPQLAFDFSQLPNGGVGLARLEFIINNNIGVHPKAILEYPNIDSDLKKAVESVARGHASPRAF YVDKLTEGIATIGAAFYPKPVIVRLSDFKSNEYKKLIGGSRYEPDEENPMLGFRGASRYIADDFAQAFEMECMALKRVRD EMGLTNVEIMVPFVRTVKQAERVVGLLAKYGLKRGENGLRLIMMCEVPSNAILAEQFLAYFDGFSIGSNDLTQLTLGLDR DSGMELLAVDFDERDPAVKFMLKRAIDTCRRLGKYVGICGQGPSDHPDFAQWLTEEGIESISLNPDTVIETWQALAKTQK
Sequences:
>Translated_800_residues MTNAANVAKDQAYVIPFEQLRMTDVEIVGGKNASLGEMISQLSEAGVRVPTGFATTALAFRDFLAHNDLTDRIAKRLESL DVDDVKSLAVAGAEIRKWIVEAPLQPRLDAEIREQFEVLCQSSPEELSFAVRSSATAEDLPDASFAGQQESYLNVVGIDD VLDRMKHVFASLYNDRAISYRVHKGFTHAEVALSAGVQRMVRSDVGAAGVMFTIDTESGFKDAVFVTSSYGLGETVVQGA VNPDEFYVFKTTLARDKHPIIRRSIGSKLIKMEFTQPGEPGRVKTVDVAHEQRNRYSITDADVIELAKYAVIIEKHYQRP MDIEWGKDGRDGKIFILQARPETVKSQANGKVEQRFKLKGQSQVLATGRAIGQKIGAGPVRVIQDPSEMERVQPGDVLVA DMTDPNWEPVMKRASAIVTNRGGRTCHAAIIARELGVPAVVGCGDATDVLKDGALVTVSCAEGDEGKIYDGLLETEVTEV QRGDLPAIPVKIMMNVGNPQLAFDFSQLPNGGVGLARLEFIINNNIGVHPKAILEYPNIDSDLKKAVESVARGHASPRAF YVDKLTEGIATIGAAFYPKPVIVRLSDFKSNEYKKLIGGSRYEPDEENPMLGFRGASRYIADDFAQAFEMECMALKRVRD EMGLTNVEIMVPFVRTVKQAERVVGLLAKYGLKRGENGLRLIMMCEVPSNAILAEQFLAYFDGFSIGSNDLTQLTLGLDR DSGMELLAVDFDERDPAVKFMLKRAIDTCRRLGKYVGICGQGPSDHPDFAQWLTEEGIESISLNPDTVIETWQALAKTQK >Mature_799_residues TNAANVAKDQAYVIPFEQLRMTDVEIVGGKNASLGEMISQLSEAGVRVPTGFATTALAFRDFLAHNDLTDRIAKRLESLD VDDVKSLAVAGAEIRKWIVEAPLQPRLDAEIREQFEVLCQSSPEELSFAVRSSATAEDLPDASFAGQQESYLNVVGIDDV LDRMKHVFASLYNDRAISYRVHKGFTHAEVALSAGVQRMVRSDVGAAGVMFTIDTESGFKDAVFVTSSYGLGETVVQGAV NPDEFYVFKTTLARDKHPIIRRSIGSKLIKMEFTQPGEPGRVKTVDVAHEQRNRYSITDADVIELAKYAVIIEKHYQRPM DIEWGKDGRDGKIFILQARPETVKSQANGKVEQRFKLKGQSQVLATGRAIGQKIGAGPVRVIQDPSEMERVQPGDVLVAD MTDPNWEPVMKRASAIVTNRGGRTCHAAIIARELGVPAVVGCGDATDVLKDGALVTVSCAEGDEGKIYDGLLETEVTEVQ RGDLPAIPVKIMMNVGNPQLAFDFSQLPNGGVGLARLEFIINNNIGVHPKAILEYPNIDSDLKKAVESVARGHASPRAFY VDKLTEGIATIGAAFYPKPVIVRLSDFKSNEYKKLIGGSRYEPDEENPMLGFRGASRYIADDFAQAFEMECMALKRVRDE MGLTNVEIMVPFVRTVKQAERVVGLLAKYGLKRGENGLRLIMMCEVPSNAILAEQFLAYFDGFSIGSNDLTQLTLGLDRD SGMELLAVDFDERDPAVKFMLKRAIDTCRRLGKYVGICGQGPSDHPDFAQWLTEEGIESISLNPDTVIETWQALAKTQK
Specific function: Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate [H]
COG id: COG0574
COG function: function code G; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEP-utilizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1787994, Length=788, Percent_Identity=65.6091370558376, Blast_Score=1058, Evalue=0.0, Organism=Escherichia coli, GI1788756, Length=399, Percent_Identity=25.8145363408521, Blast_Score=99, Evalue=7e-22, Organism=Escherichia coli, GI1788726, Length=192, Percent_Identity=32.8125, Blast_Score=90, Evalue=6e-19, Organism=Escherichia coli, GI48994992, Length=408, Percent_Identity=25.7352941176471, Blast_Score=84, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17564524, Length=237, Percent_Identity=30.8016877637131, Blast_Score=96, Evalue=7e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR008279 - InterPro: IPR006319 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR002192 - InterPro: IPR015813 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF02896 PEP-utilizers_C; PF01326 PPDK_N [H]
EC number: =2.7.9.2 [H]
Molecular weight: Translated: 87882; Mature: 87751
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: PS00370 PEP_ENZYMES_PHOS_SITE ; PS00742 PEP_ENZYMES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNAANVAKDQAYVIPFEQLRMTDVEIVGGKNASLGEMISQLSEAGVRVPTGFATTALAF CCCCCCCCCCCEEEEEHHHHCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHH RDFLAHNDLTDRIAKRLESLDVDDVKSLAVAGAEIRKWIVEAPLQPRLDAEIREQFEVLC HHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH QSSPEELSFAVRSSATAEDLPDASFAGQQESYLNVVGIDDVLDRMKHVFASLYNDRAISY CCCHHHHHHHHHCCCCHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCEEEE RVHKGFTHAEVALSAGVQRMVRSDVGAAGVMFTIDTESGFKDAVFVTSSYGLGETVVQGA EECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCCCCHHHHHCC VNPDEFYVFKTTLARDKHPIIRRSIGSKLIKMEFTQPGEPGRVKTVDVAHEQRNRYSITD CCCCCEEEEEEHHCCCCCHHHHHHHCCCEEEEECCCCCCCCCEEEEECHHHCCCCCCCCC ADVIELAKYAVIIEKHYQRPMDIEWGKDGRDGKIFILQARPETVKSQANGKVEQRFKLKG HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHCCCCHHHHHHCCC QSQVLATGRAIGQKIGAGPVRVIQDPSEMERVQPGDVLVADMTDPNWEPVMKRASAIVTN CCHHHHHHHHHHHHCCCCCEEEECCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCC RGGRTCHAAIIARELGVPAVVGCGDATDVLKDGALVTVSCAEGDEGKIYDGLLETEVTEV CCCCCHHHHHHHHHCCCCEEEECCCHHHHHCCCCEEEEEECCCCCCCEEHHHHHHHHHHH QRGDLPAIPVKIMMNVGNPQLAFDFSQLPNGGVGLARLEFIINNNIGVHPKAILEYPNID HCCCCCCCCEEEEEECCCCCEEEEHHHCCCCCCCCEEEEEEECCCCCCCCHHEEECCCCC SDLKKAVESVARGHASPRAFYVDKLTEGIATIGAAFYPKPVIVRLSDFKSNEYKKLIGGS HHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCC RYEPDEENPMLGFRGASRYIADDFAQAFEMECMALKRVRDEMGLTNVEIMVPFVRTVKQA CCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHH ERVVGLLAKYGLKRGENGLRLIMMCEVPSNAILAEQFLAYFDGFSIGSNDLTQLTLGLDR HHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCC DSGMELLAVDFDERDPAVKFMLKRAIDTCRRLGKYVGICGQGPSDHPDFAQWLTEEGIES CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHCCCE ISLNPDTVIETWQALAKTQK ECCCCHHHHHHHHHHHHCCC >Mature Secondary Structure TNAANVAKDQAYVIPFEQLRMTDVEIVGGKNASLGEMISQLSEAGVRVPTGFATTALAF CCCCCCCCCCEEEEEHHHHCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHH RDFLAHNDLTDRIAKRLESLDVDDVKSLAVAGAEIRKWIVEAPLQPRLDAEIREQFEVLC HHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH QSSPEELSFAVRSSATAEDLPDASFAGQQESYLNVVGIDDVLDRMKHVFASLYNDRAISY CCCHHHHHHHHHCCCCHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCEEEE RVHKGFTHAEVALSAGVQRMVRSDVGAAGVMFTIDTESGFKDAVFVTSSYGLGETVVQGA EECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCCCCHHHHHCC VNPDEFYVFKTTLARDKHPIIRRSIGSKLIKMEFTQPGEPGRVKTVDVAHEQRNRYSITD CCCCCEEEEEEHHCCCCCHHHHHHHCCCEEEEECCCCCCCCCEEEEECHHHCCCCCCCCC ADVIELAKYAVIIEKHYQRPMDIEWGKDGRDGKIFILQARPETVKSQANGKVEQRFKLKG HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHCCCCHHHHHHCCC QSQVLATGRAIGQKIGAGPVRVIQDPSEMERVQPGDVLVADMTDPNWEPVMKRASAIVTN CCHHHHHHHHHHHHCCCCCEEEECCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCC RGGRTCHAAIIARELGVPAVVGCGDATDVLKDGALVTVSCAEGDEGKIYDGLLETEVTEV CCCCCHHHHHHHHHCCCCEEEECCCHHHHHCCCCEEEEEECCCCCCCEEHHHHHHHHHHH QRGDLPAIPVKIMMNVGNPQLAFDFSQLPNGGVGLARLEFIINNNIGVHPKAILEYPNID HCCCCCCCCEEEEEECCCCCEEEEHHHCCCCCCCCEEEEEEECCCCCCCCHHEEECCCCC SDLKKAVESVARGHASPRAFYVDKLTEGIATIGAAFYPKPVIVRLSDFKSNEYKKLIGGS HHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCC RYEPDEENPMLGFRGASRYIADDFAQAFEMECMALKRVRDEMGLTNVEIMVPFVRTVKQA CCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHH ERVVGLLAKYGLKRGENGLRLIMMCEVPSNAILAEQFLAYFDGFSIGSNDLTQLTLGLDR HHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCC DSGMELLAVDFDERDPAVKFMLKRAIDTCRRLGKYVGICGQGPSDHPDFAQWLTEEGIES CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHCCCE ISLNPDTVIETWQALAKTQK ECCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]