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The map label for this gene is dapL [H]

Identifier: 238026893

GI number: 238026893

Start: 1379447

End: 1380664

Strand: Reverse

Name: dapL [H]

Synonym: bglu_1g12610

Alternate gene names: 238026893

Gene position: 1380664-1379447 (Counterclockwise)

Preceding gene: 238026899

Following gene: 238026892

Centisome position: 35.34

GC content: 70.36

Gene sequence:

>1218_bases
GTGAATCCACGACTCGATACGCTCCAGCCCTATCCGTTCGAAAAGCTCCGCGCGCTGTTCAAGGACGTGACGCCGTGTGC
CGCTTACGCCCCGATCAGTTTCGGCATCGGCGAGCCCAAGCACCCGACGCCGGCCCTGATCCGCGAGGCCGTGGTCGACG
CGCTCGACGGGCTCGCGTCGTATCCGGCCACGGCCGGCTCCGCGCCGCTGCGCGCCGCGATCGCCGGCTGGATCGAGCGC
CGCTACGGGCTGCCCGCGATCGACGCGGCGCGCGAGGTGCTGCCGGTGTCGGGCTCGCGCGAGGCGCTGTTCTCGCTGGC
GCAGGCCGTGATCGACGCGACGCCGCGCGCCGACGGCGAGACCGCGATCGTACTCTGTCCCAATCCGTTCTATCAAATCT
ACGAGGGCGCGGCGCTGCTGGCCGGCGCCACGCCATGGTTCGTCAACAGCGACCCGGCGCGCAATTTCGCGCCCGATTTC
TCGACGGTCCCCGACCACATCTGGGCGCGCACCCAGCTGCTGTTCGTCTGCTCGCCGGGCAATCCGACCGGCGCCGTGCT
CAAGCTCGACGACTGGCGCGAGCTGTTCGCGCTGTCGGACCGCCACGGCTTCGTGATCGCCTCCGACGAGTGCTATTCGG
AGATCTATTTCGACGAGTCGGCCCCGCCGCTCGGCGGCCTCGACGCGGCACACCGGCTCGGCCGCGGCTTCGAGCGGCTG
GTGATGCTGTCGAGCCTGTCCAAGCGCTCGAACGTGCCGGGCATGCGCTCGGGCTTCGTGGCCGGCGACGCGGCAATCCT
CGAGCGCTTCCTGCTCTACCGCACCTATCACGGCGCGGCGCTCTCGCCGGTCTGGCAGCGCGCGAGCATCGTCGCGTGGG
GGGACGAGGCGCACGTGCGCGATAACCGCGCGCGCTATGCGCAGAAGTTCAACACCGTCACGCCGATGCTGGCCGAGGTG
CTCGACGTCGCCCTGCCCGACGCCGCGTTCTACCTGTGGGCCAACGTGGCACGCACCGGGCTCACCGACACCGAGTTCGC
CCGGCGTCTGCACGCCGACTATAATGTGACGGTTTTGCCCGGCTCGTACCTCGCGCGCGACGCGCACGGCACGAATCCGG
GCCGCGATTTCGTGCGCATCGCGCTCGTGGCCGGCGCCGACGAATGCGTCGAGGGTGCGCGGCGCATCGTCGAATTCTGC
CGCGGCCTCGCCCGCTGA

Upstream 100 bases:

>100_bases
CCCTGCGCCGCCGGCCGCCGCCCTCGGCGGTCGTGCGGCCGGGCCGCGCTCCGATTCAATCCGTCCCCGACGGCCTTCCA
CCGCCCCGATATCCTAGCCC

Downstream 100 bases:

>100_bases
GCCCGCCCGTTTCCCCTTCATCCCACTTCCAGCGAAGCAATCAACCATGTCGCAACAACTTCAGCAAATCATCGACAACG
CGTGGGAAACCCGCGCTGAA

Product: succinyldiaminopimelate transaminase

Products: NA

Alternate protein names: DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase [H]

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MNPRLDTLQPYPFEKLRALFKDVTPCAAYAPISFGIGEPKHPTPALIREAVVDALDGLASYPATAGSAPLRAAIAGWIER
RYGLPAIDAAREVLPVSGSREALFSLAQAVIDATPRADGETAIVLCPNPFYQIYEGAALLAGATPWFVNSDPARNFAPDF
STVPDHIWARTQLLFVCSPGNPTGAVLKLDDWRELFALSDRHGFVIASDECYSEIYFDESAPPLGGLDAAHRLGRGFERL
VMLSSLSKRSNVPGMRSGFVAGDAAILERFLLYRTYHGAALSPVWQRASIVAWGDEAHVRDNRARYAQKFNTVTPMLAEV
LDVALPDAAFYLWANVARTGLTDTEFARRLHADYNVTVLPGSYLARDAHGTNPGRDFVRIALVAGADECVEGARRIVEFC
RGLAR

Sequences:

>Translated_405_residues
MNPRLDTLQPYPFEKLRALFKDVTPCAAYAPISFGIGEPKHPTPALIREAVVDALDGLASYPATAGSAPLRAAIAGWIER
RYGLPAIDAAREVLPVSGSREALFSLAQAVIDATPRADGETAIVLCPNPFYQIYEGAALLAGATPWFVNSDPARNFAPDF
STVPDHIWARTQLLFVCSPGNPTGAVLKLDDWRELFALSDRHGFVIASDECYSEIYFDESAPPLGGLDAAHRLGRGFERL
VMLSSLSKRSNVPGMRSGFVAGDAAILERFLLYRTYHGAALSPVWQRASIVAWGDEAHVRDNRARYAQKFNTVTPMLAEV
LDVALPDAAFYLWANVARTGLTDTEFARRLHADYNVTVLPGSYLARDAHGTNPGRDFVRIALVAGADECVEGARRIVEFC
RGLAR
>Mature_405_residues
MNPRLDTLQPYPFEKLRALFKDVTPCAAYAPISFGIGEPKHPTPALIREAVVDALDGLASYPATAGSAPLRAAIAGWIER
RYGLPAIDAAREVLPVSGSREALFSLAQAVIDATPRADGETAIVLCPNPFYQIYEGAALLAGATPWFVNSDPARNFAPDF
STVPDHIWARTQLLFVCSPGNPTGAVLKLDDWRELFALSDRHGFVIASDECYSEIYFDESAPPLGGLDAAHRLGRGFERL
VMLSSLSKRSNVPGMRSGFVAGDAAILERFLLYRTYHGAALSPVWQRASIVAWGDEAHVRDNRARYAQKFNTVTPMLAEV
LDVALPDAAFYLWANVARTGLTDTEFARRLHADYNVTVLPGSYLARDAHGTNPGRDFVRIALVAGADECVEGARRIVEFC
RGLAR

Specific function: Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate, a reaction that requires three enzymes in E.coli

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. LL-diaminopimelate aminotransferase subfamily [H]

Homologues:

Organism=Homo sapiens, GI95147551, Length=267, Percent_Identity=27.3408239700375, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI169881279, Length=267, Percent_Identity=27.3408239700375, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI56713254, Length=398, Percent_Identity=22.3618090452261, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI56713256, Length=398, Percent_Identity=22.3618090452261, Blast_Score=76, Evalue=4e-14,
Organism=Escherichia coli, GI1788722, Length=409, Percent_Identity=28.1173594132029, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI1786816, Length=342, Percent_Identity=26.3157894736842, Blast_Score=72, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17567663, Length=391, Percent_Identity=24.0409207161125, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI18859735, Length=401, Percent_Identity=25.9351620947631, Blast_Score=73, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR019881
- InterPro:   IPR004838
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: =2.6.1.83 [H]

Molecular weight: Translated: 44150; Mature: 44150

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPRLDTLQPYPFEKLRALFKDVTPCAAYAPISFGIGEPKHPTPALIREAVVDALDGLAS
CCCCCCCCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
YPATAGSAPLRAAIAGWIERRYGLPAIDAAREVLPVSGSREALFSLAQAVIDATPRADGE
CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCC
TAIVLCPNPFYQIYEGAALLAGATPWFVNSDPARNFAPDFSTVPDHIWARTQLLFVCSPG
EEEEECCCHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHCEEEEEEEECCC
NPTGAVLKLDDWRELFALSDRHGFVIASDECYSEIYFDESAPPLGGLDAAHRLGRGFERL
CCCCEEEEEHHHHHHHHHCCCCCEEEECHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHH
VMLSSLSKRSNVPGMRSGFVAGDAAILERFLLYRTYHGAALSPVWQRASIVAWGDEAHVR
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHCHHHHCCEEEEECCCCHHH
DNRARYAQKFNTVTPMLAEVLDVALPDAAFYLWANVARTGLTDTEFARRLHADYNVTVLP
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEC
GSYLARDAHGTNPGRDFVRIALVAGADECVEGARRIVEFCRGLAR
CHHHHCCCCCCCCCHHHEEEHHHHCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNPRLDTLQPYPFEKLRALFKDVTPCAAYAPISFGIGEPKHPTPALIREAVVDALDGLAS
CCCCCCCCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
YPATAGSAPLRAAIAGWIERRYGLPAIDAAREVLPVSGSREALFSLAQAVIDATPRADGE
CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCC
TAIVLCPNPFYQIYEGAALLAGATPWFVNSDPARNFAPDFSTVPDHIWARTQLLFVCSPG
EEEEECCCHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHCEEEEEEEECCC
NPTGAVLKLDDWRELFALSDRHGFVIASDECYSEIYFDESAPPLGGLDAAHRLGRGFERL
CCCCEEEEEHHHHHHHHHCCCCCEEEECHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHH
VMLSSLSKRSNVPGMRSGFVAGDAAILERFLLYRTYHGAALSPVWQRASIVAWGDEAHVR
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHCHHHHCCEEEEECCCCHHH
DNRARYAQKFNTVTPMLAEVLDVALPDAAFYLWANVARTGLTDTEFARRLHADYNVTVLP
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEC
GSYLARDAHGTNPGRDFVRIALVAGADECVEGARRIVEFCRGLAR
CHHHHCCCCCCCCCHHHEEEHHHHCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA