| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026876
Identifier: 238026876
GI number: 238026876
Start: 1362455
End: 1362724
Strand: Reverse
Name: 238026876
Synonym: bglu_1g12440
Alternate gene names: NA
Gene position: 1362724-1362455 (Counterclockwise)
Preceding gene: 238026881
Following gene: 238026875
Centisome position: 34.88
GC content: 64.81
Gene sequence:
>270_bases ATGAGCGACATCACCGCCCAGTTCAACCAAGCGCAGGAAGACGTCAAGCAACTGTCCGAGCGCCCGGGCAACCTGACGCT GCTGCGCCTGTACGCGCTCTTCAAGCAGGGCACCGAAGGCGATGCGCACGGCGACAAGCCGGGCTTCGCCGACATCGTCG GCAAGTACAAGTACGACGCCTGGGCGGCCCTCAAGGGCACCCCGCAGGAAACCGCGCAGCGGCAGTACGTCGAACTCGTC GAATCGCTGAAGAACGGCACCGCGTCGTGA
Upstream 100 bases:
>100_bases GGCGCTCGCGGCGCCGGCGCGGTTTGGAAGAAAGGTTCGAGCCGCGCGGCGGCCGCGCTTGCTACCATTTGCCGACCTGA AAACCCCTCGGAGACACTCG
Downstream 100 bases:
>100_bases TCGGGCGGGCGCCGGCGCGCCGCGCCGACGCCCGGCACCCCGTCGGAAACCCAAGCAAACGCATCGAAGCCGCCGCCATC CCAGCGCGAGATGGCCGGCA
Product: acyl-CoA-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MSDITAQFNQAQEDVKQLSERPGNLTLLRLYALFKQGTEGDAHGDKPGFADIVGKYKYDAWAALKGTPQETAQRQYVELV ESLKNGTAS
Sequences:
>Translated_89_residues MSDITAQFNQAQEDVKQLSERPGNLTLLRLYALFKQGTEGDAHGDKPGFADIVGKYKYDAWAALKGTPQETAQRQYVELV ESLKNGTAS >Mature_88_residues SDITAQFNQAQEDVKQLSERPGNLTLLRLYALFKQGTEGDAHGDKPGFADIVGKYKYDAWAALKGTPQETAQRQYVELVE SLKNGTAS
Specific function: Unknown
COG id: COG4281
COG function: function code I; Acyl-CoA-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI120433590, Length=79, Percent_Identity=43.0379746835443, Blast_Score=75, Evalue=1e-14, Organism=Homo sapiens, GI120433593, Length=79, Percent_Identity=43.0379746835443, Blast_Score=75, Evalue=1e-14, Organism=Homo sapiens, GI45643119, Length=71, Percent_Identity=46.4788732394366, Blast_Score=72, Evalue=1e-13, Organism=Homo sapiens, GI260275230, Length=71, Percent_Identity=46.4788732394366, Blast_Score=72, Evalue=1e-13, Organism=Homo sapiens, GI260274832, Length=71, Percent_Identity=46.4788732394366, Blast_Score=71, Evalue=2e-13, Organism=Homo sapiens, GI295842534, Length=70, Percent_Identity=42.8571428571429, Blast_Score=67, Evalue=4e-12, Organism=Homo sapiens, GI295842514, Length=70, Percent_Identity=42.8571428571429, Blast_Score=66, Evalue=6e-12, Organism=Homo sapiens, GI295849279, Length=70, Percent_Identity=42.8571428571429, Blast_Score=65, Evalue=8e-12, Organism=Homo sapiens, GI10140853, Length=70, Percent_Identity=42.8571428571429, Blast_Score=65, Evalue=8e-12, Organism=Homo sapiens, GI295849266, Length=70, Percent_Identity=42.8571428571429, Blast_Score=65, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17535521, Length=84, Percent_Identity=48.8095238095238, Blast_Score=82, Evalue=6e-17, Organism=Caenorhabditis elegans, GI17506027, Length=80, Percent_Identity=51.25, Blast_Score=79, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI6321474, Length=80, Percent_Identity=40, Blast_Score=70, Evalue=7e-14, Organism=Drosophila melanogaster, GI24582714, Length=77, Percent_Identity=50.6493506493506, Blast_Score=81, Evalue=1e-16, Organism=Drosophila melanogaster, GI24659809, Length=80, Percent_Identity=47.5, Blast_Score=79, Evalue=4e-16, Organism=Drosophila melanogaster, GI24659814, Length=80, Percent_Identity=47.5, Blast_Score=79, Evalue=4e-16, Organism=Drosophila melanogaster, GI21357027, Length=74, Percent_Identity=41.8918918918919, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9820; Mature: 9689
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDITAQFNQAQEDVKQLSERPGNLTLLRLYALFKQGTEGDAHGDKPGFADIVGKYKYDA CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCH WAALKGTPQETAQRQYVELVESLKNGTAS HHHCCCCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SDITAQFNQAQEDVKQLSERPGNLTLLRLYALFKQGTEGDAHGDKPGFADIVGKYKYDA CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCH WAALKGTPQETAQRQYVELVESLKNGTAS HHHCCCCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA