| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026855
Identifier: 238026855
GI number: 238026855
Start: 1332524
End: 1333552
Strand: Reverse
Name: 238026855
Synonym: bglu_1g12230
Alternate gene names: NA
Gene position: 1333552-1332524 (Counterclockwise)
Preceding gene: 238026864
Following gene: 238026849
Centisome position: 34.14
GC content: 66.86
Gene sequence:
>1029_bases ATGTCCAGCATTGCATTTATCGAGGTGGAGGGCCGGTTCGCGATGCCATCGTCGCGTTCTTGCGCGCCGTCCTCCTATGG CCACGAATGGGCGCTGCTGCCGCCGGCGCCGGAATCGCGCACGGGCATCCGTTCGCTCTATGCAGCGATCGTGCGCACCG TCTGTCTCGACATCGACGCGTTTCTCGCCGCGTCCCGCTGGGATCGTGGCCGAGACGCCAAGGCGGTCTCGGCCACGATC CCAGCGGCGGTGCACGCGCCCCCGGCGGCGGAAGCACCGCTTGAAACCAAGCTGCCGGAACCCAGGGGGCCAGCAGCCAA TGCGTTCCCAGACGAAGCTCGCCCGATCAGCCTGCCCAAGACACCGCGATATCGCGCCGCGCGACGCTCGCCGCATTCGT TGCGGCGACGCGCGGGCCAGATCGGCATCGTTGGGGCGGCCATGCTGCTCGGCTGGATCGTGATCGGCCATGTGCCGCCG AAGCCGGAACGCAACGGTGCCGTCGATGTCTGGCAGGGTGCTGTCAATGGCTCAAGTTCCCGTCGAGCGGCGCCGGTTGC GCTGCGGCAAGCAGGCGCGGACGTCGAACCATCGAGTGCCGATGCCATAGCGAGTCCGCGGCGCACACCGATCTCGAAGC ATGCTGCCGCCGGCGCACCTACTCGCGATGAGTCGAAACGCAATCACGCGCAAGCCGGCACCGGGCTTGCGCGCGTCGAT TCACGCCGCCTCGCGTCGTCACACGCCTTCGCCCCCCATCGTGAACCCGCTCGCCCCACGGCGTCTGTCGACCGCAGCAG ACAGGCTCGCCGCGCTTCCCGCTCAGCGAGCCATCACGACGTCAATGCCCGACGCGGCCTGGTCGCCTCGGATGCTTTCG ACATCAACGACTACGCTGATCTCGTCGACGAATTGCGGCAACGTAGCGCAATAGCGACGCGAAACGAGCAGCCGACCACC GGCACCGAATGGGCCGATCAGATCTCACAGCGTCGCCTGACCGATATCCCCGAACAGTTTTCGCAATGA
Upstream 100 bases:
>100_bases TGCGCGCCCGGGCCTGCGGAACGACTGGTCAGCGCTGCAGTCGGCCCGCGCCAGTGATGTCCACTGCCGCTCACGTTTAC GCGGCGACCGCGAGGAATCC
Downstream 100 bases:
>100_bases ACGAAGCGCATCGACGCAGCACGTGCCGATGATGCCAGGCGCCGACACGGAGCCGTACCGGATGGTAAACATCCAGCCGA CGCCGGTTCGGCGTAACGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MSSIAFIEVEGRFAMPSSRSCAPSSYGHEWALLPPAPESRTGIRSLYAAIVRTVCLDIDAFLAASRWDRGRDAKAVSATI PAAVHAPPAAEAPLETKLPEPRGPAANAFPDEARPISLPKTPRYRAARRSPHSLRRRAGQIGIVGAAMLLGWIVIGHVPP KPERNGAVDVWQGAVNGSSSRRAAPVALRQAGADVEPSSADAIASPRRTPISKHAAAGAPTRDESKRNHAQAGTGLARVD SRRLASSHAFAPHREPARPTASVDRSRQARRASRSASHHDVNARRGLVASDAFDINDYADLVDELRQRSAIATRNEQPTT GTEWADQISQRRLTDIPEQFSQ
Sequences:
>Translated_342_residues MSSIAFIEVEGRFAMPSSRSCAPSSYGHEWALLPPAPESRTGIRSLYAAIVRTVCLDIDAFLAASRWDRGRDAKAVSATI PAAVHAPPAAEAPLETKLPEPRGPAANAFPDEARPISLPKTPRYRAARRSPHSLRRRAGQIGIVGAAMLLGWIVIGHVPP KPERNGAVDVWQGAVNGSSSRRAAPVALRQAGADVEPSSADAIASPRRTPISKHAAAGAPTRDESKRNHAQAGTGLARVD SRRLASSHAFAPHREPARPTASVDRSRQARRASRSASHHDVNARRGLVASDAFDINDYADLVDELRQRSAIATRNEQPTT GTEWADQISQRRLTDIPEQFSQ >Mature_341_residues SSIAFIEVEGRFAMPSSRSCAPSSYGHEWALLPPAPESRTGIRSLYAAIVRTVCLDIDAFLAASRWDRGRDAKAVSATIP AAVHAPPAAEAPLETKLPEPRGPAANAFPDEARPISLPKTPRYRAARRSPHSLRRRAGQIGIVGAAMLLGWIVIGHVPPK PERNGAVDVWQGAVNGSSSRRAAPVALRQAGADVEPSSADAIASPRRTPISKHAAAGAPTRDESKRNHAQAGTGLARVDS RRLASSHAFAPHREPARPTASVDRSRQARRASRSASHHDVNARRGLVASDAFDINDYADLVDELRQRSAIATRNEQPTTG TEWADQISQRRLTDIPEQFSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36776; Mature: 36645
Theoretical pI: Translated: 11.20; Mature: 11.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSIAFIEVEGRFAMPSSRSCAPSSYGHEWALLPPAPESRTGIRSLYAAIVRTVCLDIDA CCCEEEEEECCCEECCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH FLAASRWDRGRDAKAVSATIPAAVHAPPAAEAPLETKLPEPRGPAANAFPDEARPISLPK HHHHHHCCCCCCCCHHHHHCCHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCC TPRYRAARRSPHSLRRRAGQIGIVGAAMLLGWIVIGHVPPKPERNGAVDVWQGAVNGSSS CCCHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHCCCCCCC RRAAPVALRQAGADVEPSSADAIASPRRTPISKHAAAGAPTRDESKRNHAQAGTGLARVD CCCCHHHHHHCCCCCCCCCCHHHCCCCCCCCHHHHCCCCCCCCHHHHHHHHHCCCHHHHH SRRLASSHAFAPHREPARPTASVDRSRQARRASRSASHHDVNARRGLVASDAFDINDYAD HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCEEECCCCCCHHHHH LVDELRQRSAIATRNEQPTTGTEWADQISQRRLTDIPEQFSQ HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SSIAFIEVEGRFAMPSSRSCAPSSYGHEWALLPPAPESRTGIRSLYAAIVRTVCLDIDA CCEEEEEECCCEECCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH FLAASRWDRGRDAKAVSATIPAAVHAPPAAEAPLETKLPEPRGPAANAFPDEARPISLPK HHHHHHCCCCCCCCHHHHHCCHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCC TPRYRAARRSPHSLRRRAGQIGIVGAAMLLGWIVIGHVPPKPERNGAVDVWQGAVNGSSS CCCHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHCCCCCCC RRAAPVALRQAGADVEPSSADAIASPRRTPISKHAAAGAPTRDESKRNHAQAGTGLARVD CCCCHHHHHHCCCCCCCCCCHHHCCCCCCCCHHHHCCCCCCCCHHHHHHHHHCCCHHHHH SRRLASSHAFAPHREPARPTASVDRSRQARRASRSASHHDVNARRGLVASDAFDINDYAD HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCEEECCCCCCHHHHH LVDELRQRSAIATRNEQPTTGTEWADQISQRRLTDIPEQFSQ HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA