| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is bvgS [H]
Identifier: 238026807
GI number: 238026807
Start: 1278993
End: 1281314
Strand: Direct
Name: bvgS [H]
Synonym: bglu_1g11660
Alternate gene names: 238026807
Gene position: 1278993-1281314 (Clockwise)
Preceding gene: 238026806
Following gene: 238026808
Centisome position: 32.74
GC content: 73.9
Gene sequence:
>2322_bases ATGACGGGTGCCGCGCTGGTCGCGATGGCGACGGTGCTGCAGTCGCTGCTGGTCCACTACGGCGGCCCGAACATGCCGCT GCTGCTCTACTACCCCTTCATCGCGGGCGTGGCGTGGACGATCTCGTTCGGCGCCGGCCTCGTCGCCTCGCTCGTGAGCG CGCTGCTGATCTGGCTGCTGTTCGTCAGCGACCCGCGCGCCTATCCGCTGGTGCCCGCGATGCAGGCCATGCAGATCGGC CTGTTCCTGCTGGTGTCGGGCGTGGTCTGCGCCGTGGTGGCCGCGTTTCACCATTCGCGGCTGACCAACGACGCGCTGCG CCGCCGCGAGGCCGCCGCGCGCCAGCAATACGAGTCGGTGCTCGCGTCGCTGACGCAGGGCGTGATCGTTACCGATTCGG CCGGCCGCATCACCTACCTGAACCCGGCCGCGGCCGCGCTCGCCGATCTCGACGCCCGCGTCGCGCACGGCCGCGCGCTG ACCGACGCGCTGCACGGCAACGACGGCCACGGCGCCGGCACGCGCTCGACCACCGTGCTCGAACGCGTGCTTCGCGGTGA GCCCGGCGCCTCCGACCTGCTGTGGCTGCGGCCCGCCGGGCAGGGCGCGCGCATTCCGGTGGCCGCCGTCGCCTCGCCGC TGTGCGACCCGGACGGCGTGCGCAGCGGCGCGGTGCTGGTGCTGCGCGACGTCAGCGCCGATCACGAGCGCGCCACCGCG AACCAGATGCTGCGGCGGCTCGTCGACGCTTCGCCCGACGCCATCATCGGGGTGGGCGCCGATCGCCTGATCACGAGCTG GAACCCGGCCGCGCAGCGCATGTTCGGCTATGCCGAGGCGCAGGCGCTCGGCCGCGACGCCGGCATGCTGGTCGCGCCGC GCTGGCAGCGCCGCCATCCGCTTGCCGCGGCGGTGCGCGACGTGCATGACGCCGTGAGCGGCGTGGACCTGCTCTGCGTG CGCGAGAACGGCGAGCGGTTCCGCGCGACGCTGGCCGCCTCGCCGGTGTTCGACGACGAGCAGGTCTGCGTGGCGCTGTC GCTGACGCTGCGCGACGCGCGCCTGCAGCGCCGCCGCGAGCGCGACAATCATCATCGGCTGCGCGGCGCGCGCGACGCGC GGCGCCAGGCCGACACCTCGAACCGCCTGAAGGACGAGCTGCTCGCGATCGTCTCGCACGAGCTGCGCACGCCGCTCAAC GTGATCTACGGCTGGGTGGAGGTGATGCGCAACCCGGTGGCCGAGGCGCTGCAGCGTCAGGCAATCGACGCGATCGACCG CAGCGCCCGTTCGCTGTCGCGGATGGTGGCCGACCTGCTCGACGCCTCGTCGCTCGCCACCGGCAAGCTGCGGCTCGACC CGATGCCGGTCGATCTGGTGCGGGTGGTGGCCGACGTCACGGGCGCGCTCGGCACCACGGCCGCCAACGAGGGCATCACG CTCGAGACGCACTGCGAGCTCGACACCTGCATCGTGTCGGGCGACGCCGAGCGGCTCAGGCAGATGCTCTCGAACCTGCT GTCGAACGCCTTCAAGTTCACGCCGCGCGGCGGCCGCGTGACGGTGGCGCTCAGCCGCGAGAACGCCCGCGCGCTGCTGA GCGTGACCGACACGGGGCAGGGCGTGGCGCCCGAATTCCTGCCGCACGTATTCGAGGCGTTCCGGCGCGCCGAGGGCTCG CCCGCCTCACCGCGCCGCGGCCTCGGGCTGGGCCTGTCGATCGTGCGCCACATCGCCGAGCTGCACGGCGGCAGCGCGCG CGTGACGAGCGACGGCACCGGCCACGGCACCACCTTCGAGGTCGCGCTGCCGGCCGGCTGGCAGCCGGCCGGCACGCTGA CCTGGGCCGCCCAGACGACGAGCGCGCCGGCCACGCGCGAGCGGCTGCACCTCGGCGGGCAGCGCATCCTGCTGGTCGAC GACGACGCCACCTCGCGCACCAGCCTCGCCACCGCGCTCGCCACGCTCGGCGCCGAGATCGTGGTGGCCGAGTCGGGGCG CGACGCGCTCGCCAGGATCGAGGCCGCGCGGCCTACCGTCGTGCTGTCCGATCTCGCGATGCCGGACGGCGACGGGTTCT GGCTGCTCGACGCGCTGCATGGCGGCAACTACACGACCGCGCCGGTGCTGGCCGTGACTGCCCACGCCGGGCAGGCCGAC GAGCGGCGCGTGCTGGCCGCCGGCTTCGACGCTTATCTGTGCAAGCCGGTCGACATCCAGCTGCTCGCACGCGAGATCCT GCGCACTACGCAGGCGCGCGGCGAGGTGCCGACGCACGCGTTGCCGCCGCCGCAGGCGCTCGACTCGCGGCTGCCCGACT GA
Upstream 100 bases:
>100_bases GGGCCGCCGCGGCGGCCGGCGCGGGCGTGCGGCCGGCATGGCGGCGCGGACGGGAATCGAACGGATGACCCAAATGCAAT CAGGCTGGATTCGAAATGGC
Downstream 100 bases:
>100_bases GCCGCCGGCTCGCCCGCCCGATCCGGGGCGGGCGCCTCGTCCCCCGGCTTGCGCATGCCGAGCGCGGCCTCGCCAGCGCG TTCCGTTCCCGCTTCGGGCC
Product: sensory box histidine kinase/response regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 773; Mature: 772
Protein sequence:
>773_residues MTGAALVAMATVLQSLLVHYGGPNMPLLLYYPFIAGVAWTISFGAGLVASLVSALLIWLLFVSDPRAYPLVPAMQAMQIG LFLLVSGVVCAVVAAFHHSRLTNDALRRREAAARQQYESVLASLTQGVIVTDSAGRITYLNPAAAALADLDARVAHGRAL TDALHGNDGHGAGTRSTTVLERVLRGEPGASDLLWLRPAGQGARIPVAAVASPLCDPDGVRSGAVLVLRDVSADHERATA NQMLRRLVDASPDAIIGVGADRLITSWNPAAQRMFGYAEAQALGRDAGMLVAPRWQRRHPLAAAVRDVHDAVSGVDLLCV RENGERFRATLAASPVFDDEQVCVALSLTLRDARLQRRRERDNHHRLRGARDARRQADTSNRLKDELLAIVSHELRTPLN VIYGWVEVMRNPVAEALQRQAIDAIDRSARSLSRMVADLLDASSLATGKLRLDPMPVDLVRVVADVTGALGTTAANEGIT LETHCELDTCIVSGDAERLRQMLSNLLSNAFKFTPRGGRVTVALSRENARALLSVTDTGQGVAPEFLPHVFEAFRRAEGS PASPRRGLGLGLSIVRHIAELHGGSARVTSDGTGHGTTFEVALPAGWQPAGTLTWAAQTTSAPATRERLHLGGQRILLVD DDATSRTSLATALATLGAEIVVAESGRDALARIEAARPTVVLSDLAMPDGDGFWLLDALHGGNYTTAPVLAVTAHAGQAD ERRVLAAGFDAYLCKPVDIQLLAREILRTTQARGEVPTHALPPPQALDSRLPD
Sequences:
>Translated_773_residues MTGAALVAMATVLQSLLVHYGGPNMPLLLYYPFIAGVAWTISFGAGLVASLVSALLIWLLFVSDPRAYPLVPAMQAMQIG LFLLVSGVVCAVVAAFHHSRLTNDALRRREAAARQQYESVLASLTQGVIVTDSAGRITYLNPAAAALADLDARVAHGRAL TDALHGNDGHGAGTRSTTVLERVLRGEPGASDLLWLRPAGQGARIPVAAVASPLCDPDGVRSGAVLVLRDVSADHERATA NQMLRRLVDASPDAIIGVGADRLITSWNPAAQRMFGYAEAQALGRDAGMLVAPRWQRRHPLAAAVRDVHDAVSGVDLLCV RENGERFRATLAASPVFDDEQVCVALSLTLRDARLQRRRERDNHHRLRGARDARRQADTSNRLKDELLAIVSHELRTPLN VIYGWVEVMRNPVAEALQRQAIDAIDRSARSLSRMVADLLDASSLATGKLRLDPMPVDLVRVVADVTGALGTTAANEGIT LETHCELDTCIVSGDAERLRQMLSNLLSNAFKFTPRGGRVTVALSRENARALLSVTDTGQGVAPEFLPHVFEAFRRAEGS PASPRRGLGLGLSIVRHIAELHGGSARVTSDGTGHGTTFEVALPAGWQPAGTLTWAAQTTSAPATRERLHLGGQRILLVD DDATSRTSLATALATLGAEIVVAESGRDALARIEAARPTVVLSDLAMPDGDGFWLLDALHGGNYTTAPVLAVTAHAGQAD ERRVLAAGFDAYLCKPVDIQLLAREILRTTQARGEVPTHALPPPQALDSRLPD >Mature_772_residues TGAALVAMATVLQSLLVHYGGPNMPLLLYYPFIAGVAWTISFGAGLVASLVSALLIWLLFVSDPRAYPLVPAMQAMQIGL FLLVSGVVCAVVAAFHHSRLTNDALRRREAAARQQYESVLASLTQGVIVTDSAGRITYLNPAAAALADLDARVAHGRALT DALHGNDGHGAGTRSTTVLERVLRGEPGASDLLWLRPAGQGARIPVAAVASPLCDPDGVRSGAVLVLRDVSADHERATAN QMLRRLVDASPDAIIGVGADRLITSWNPAAQRMFGYAEAQALGRDAGMLVAPRWQRRHPLAAAVRDVHDAVSGVDLLCVR ENGERFRATLAASPVFDDEQVCVALSLTLRDARLQRRRERDNHHRLRGARDARRQADTSNRLKDELLAIVSHELRTPLNV IYGWVEVMRNPVAEALQRQAIDAIDRSARSLSRMVADLLDASSLATGKLRLDPMPVDLVRVVADVTGALGTTAANEGITL ETHCELDTCIVSGDAERLRQMLSNLLSNAFKFTPRGGRVTVALSRENARALLSVTDTGQGVAPEFLPHVFEAFRRAEGSP ASPRRGLGLGLSIVRHIAELHGGSARVTSDGTGHGTTFEVALPAGWQPAGTLTWAAQTTSAPATRERLHLGGQRILLVDD DATSRTSLATALATLGAEIVVAESGRDALARIEAARPTVVLSDLAMPDGDGFWLLDALHGGNYTTAPVLAVTAHAGQADE RRVLAAGFDAYLCKPVDIQLLAREILRTTQARGEVPTHALPPPQALDSRLPD
Specific function: Member of the two-component regulatory system BvgS/BvgA. Phosphorylates BvgA via a four-step phosphorelay in response to environmental signals [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI48994928, Length=508, Percent_Identity=28.3464566929134, Blast_Score=146, Evalue=5e-36, Organism=Escherichia coli, GI1788713, Length=394, Percent_Identity=30.4568527918782, Blast_Score=145, Evalue=7e-36, Organism=Escherichia coli, GI87081816, Length=380, Percent_Identity=29.4736842105263, Blast_Score=125, Evalue=1e-29, Organism=Escherichia coli, GI1789149, Length=296, Percent_Identity=30.0675675675676, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI1788393, Length=227, Percent_Identity=30.8370044052863, Blast_Score=108, Evalue=1e-24, Organism=Escherichia coli, GI1786600, Length=244, Percent_Identity=32.7868852459016, Blast_Score=108, Evalue=1e-24, Organism=Escherichia coli, GI1786783, Length=218, Percent_Identity=32.1100917431193, Blast_Score=98, Evalue=2e-21, Organism=Escherichia coli, GI145693157, Length=289, Percent_Identity=27.3356401384083, Blast_Score=96, Evalue=8e-21, Organism=Escherichia coli, GI1788549, Length=390, Percent_Identity=22.5641025641026, Blast_Score=92, Evalue=9e-20, Organism=Escherichia coli, GI1786912, Length=247, Percent_Identity=28.7449392712551, Blast_Score=88, Evalue=2e-18, Organism=Escherichia coli, GI1790436, Length=231, Percent_Identity=30.7359307359307, Blast_Score=82, Evalue=2e-16, Organism=Escherichia coli, GI1790861, Length=216, Percent_Identity=30.5555555555556, Blast_Score=76, Evalue=7e-15, Organism=Escherichia coli, GI87082128, Length=227, Percent_Identity=26.431718061674, Blast_Score=73, Evalue=6e-14, Organism=Escherichia coli, GI1788279, Length=215, Percent_Identity=26.9767441860465, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1787894, Length=239, Percent_Identity=30.9623430962343, Blast_Score=72, Evalue=2e-13, Organism=Escherichia coli, GI1789808, Length=224, Percent_Identity=29.0178571428571, Blast_Score=70, Evalue=6e-13, Organism=Escherichia coli, GI1790551, Length=211, Percent_Identity=28.9099526066351, Blast_Score=64, Evalue=3e-11, Organism=Escherichia coli, GI1788550, Length=118, Percent_Identity=36.4406779661017, Blast_Score=63, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR001638 - InterPro: IPR004358 - InterPro: IPR008207 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF01627 Hpt; PF00989 PAS; PF00072 Response_reg; PF00497 SBP_bac_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 82462; Mature: 82331
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: PS50112 PAS ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGAALVAMATVLQSLLVHYGGPNMPLLLYYPFIAGVAWTISFGAGLVASLVSALLIWLL CCCHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVSDPRAYPLVPAMQAMQIGLFLLVSGVVCAVVAAFHHSRLTNDALRRREAAARQQYESV HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LASLTQGVIVTDSAGRITYLNPAAAALADLDARVAHGRALTDALHGNDGHGAGTRSTTVL HHHHHCCEEEECCCCCEEEECHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHH ERVLRGEPGASDLLWLRPAGQGARIPVAAVASPLCDPDGVRSGAVLVLRDVSADHERATA HHHHCCCCCCCCEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHH NQMLRRLVDASPDAIIGVGADRLITSWNPAAQRMFGYAEAQALGRDAGMLVAPRWQRRHP HHHHHHHHCCCCCEEEECCHHHHEECCCHHHHHHHHHHHHHHHCCCCCEEECCCHHHCCC LAAAVRDVHDAVSGVDLLCVRENGERFRATLAASPVFDDEQVCVALSLTLRDARLQRRRE HHHHHHHHHHHHCCCEEEEEECCCCEEEEEEECCCCCCCCCEEEEEEHHHHHHHHHHHHH RDNHHRLRGARDARRQADTSNRLKDELLAIVSHELRTPLNVIYGWVEVMRNPVAEALQRQ CCHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH AIDAIDRSARSLSRMVADLLDASSLATGKLRLDPMPVDLVRVVADVTGALGTTAANEGIT HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCEE LETHCELDTCIVSGDAERLRQMLSNLLSNAFKFTPRGGRVTVALSRENARALLSVTDTGQ EEEECCEEEEEECCCHHHHHHHHHHHHHHHEEECCCCCEEEEEEECCCCEEEEEEECCCC GVAPEFLPHVFEAFRRAEGSPASPRRGLGLGLSIVRHIAELHGGSARVTSDGTGHGTTFE CCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEE VALPAGWQPAGTLTWAAQTTSAPATRERLHLGGQRILLVDDDATSRTSLATALATLGAEI EEECCCCCCCCCEEEEECCCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCEE VVAESGRDALARIEAARPTVVLSDLAMPDGDGFWLLDALHGGNYTTAPVLAVTAHAGQAD EEECCCCHHHHHHHHCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCC ERRVLAAGFDAYLCKPVDIQLLAREILRTTQARGEVPTHALPPPQALDSRLPD CCEEEEECCCHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCC >Mature Secondary Structure TGAALVAMATVLQSLLVHYGGPNMPLLLYYPFIAGVAWTISFGAGLVASLVSALLIWLL CCHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVSDPRAYPLVPAMQAMQIGLFLLVSGVVCAVVAAFHHSRLTNDALRRREAAARQQYESV HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LASLTQGVIVTDSAGRITYLNPAAAALADLDARVAHGRALTDALHGNDGHGAGTRSTTVL HHHHHCCEEEECCCCCEEEECHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHH ERVLRGEPGASDLLWLRPAGQGARIPVAAVASPLCDPDGVRSGAVLVLRDVSADHERATA HHHHCCCCCCCCEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHH NQMLRRLVDASPDAIIGVGADRLITSWNPAAQRMFGYAEAQALGRDAGMLVAPRWQRRHP HHHHHHHHCCCCCEEEECCHHHHEECCCHHHHHHHHHHHHHHHCCCCCEEECCCHHHCCC LAAAVRDVHDAVSGVDLLCVRENGERFRATLAASPVFDDEQVCVALSLTLRDARLQRRRE HHHHHHHHHHHHCCCEEEEEECCCCEEEEEEECCCCCCCCCEEEEEEHHHHHHHHHHHHH RDNHHRLRGARDARRQADTSNRLKDELLAIVSHELRTPLNVIYGWVEVMRNPVAEALQRQ CCHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH AIDAIDRSARSLSRMVADLLDASSLATGKLRLDPMPVDLVRVVADVTGALGTTAANEGIT HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCEE LETHCELDTCIVSGDAERLRQMLSNLLSNAFKFTPRGGRVTVALSRENARALLSVTDTGQ EEEECCEEEEEECCCHHHHHHHHHHHHHHHEEECCCCCEEEEEEECCCCEEEEEEECCCC GVAPEFLPHVFEAFRRAEGSPASPRRGLGLGLSIVRHIAELHGGSARVTSDGTGHGTTFE CCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEE VALPAGWQPAGTLTWAAQTTSAPATRERLHLGGQRILLVDDDATSRTSLATALATLGAEI EEECCCCCCCCCEEEEECCCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCEE VVAESGRDALARIEAARPTVVLSDLAMPDGDGFWLLDALHGGNYTTAPVLAVTAHAGQAD EEECCCCHHHHHHHHCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCC ERRVLAAGFDAYLCKPVDIQLLAREILRTTQARGEVPTHALPPPQALDSRLPD CCEEEEECCCHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1791760; 12910271 [H]