| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is phoU [H]
Identifier: 238026791
GI number: 238026791
Start: 1261444
End: 1262148
Strand: Direct
Name: phoU [H]
Synonym: bglu_1g11490
Alternate gene names: 238026791
Gene position: 1261444-1262148 (Clockwise)
Preceding gene: 238026790
Following gene: 238026792
Centisome position: 32.29
GC content: 64.11
Gene sequence:
>705_bases ATGACTGACAAGCATCTGTCGAGCCAGTTCGACGCCGATCTGAACGCGGTGTCGTCGAAGGTTCTCGAAATGGGCGGCCT CGTCGAGGCGCAGATCACCGAGGCGATGTTCGCGCTCAACGAGTTCGACCGCCAGGCGGCCGAGCGCGTGATCAGCAACG AGGACCGGCTCAACCACATGGAAGTCGAGATCGACGAGGAATGCGGCAACATCATCGCGCGCCGCCAGCCGGCCGCGCGC GACCTGCGCCTGCTGATGTCGATCTCGAAGACGATCACCAACCTCGAGCGCGCCGGCGACGAGGCCGAGAAGATCGCCAA GCGCGTGCGCCGTCTGGCCGACGAGCCGCTCGCCCGCGGCGTGAACATCGCCGAGATCAAGGTGTCGGGCGACATGGCCG TGACGATCCTGCGCCGCGCGCTCGACGCCTTCGCGCGTCTGGACACGGTGGCCGCCGCGCAGATCGTCAAGGACGACAAG GAAATCGACCAGGAATTCCGTGCGTTCGTGCGCAAGCTCGTGTCGTACATGCAGGAAGATCCGCGCACGATCTCGGTCGG CCTCGACTTCCTGTTCATCGCGAAGGCCATCGAGCGGATCGGTGATCACGCGAAGAACATCGCGGAATTCATCATCTACA TCGTGAAGGGCACCGACGTGCGGCACCAGCCGCGCGACCTGCTCGATCGCGAAGCCAATAGCTAA
Upstream 100 bases:
>100_bases ATCGAATTCGGCGATACCGAGAAGATCTTCATCAAGCCGGCCCGCAAGGAAACGGAAGACTACATCACCGGCCGTTTCGG TTGACGGCGGAGTACATACT
Downstream 100 bases:
>100_bases CCCACGTCAGAACAAGGACGGACAGAGGTGCCGATGCCCAGCAACATTCTCGTCATCGAAGATGAGCCCGCGATTTCCGA ACTGATTTCGGTCAACCTTC
Product: phosphate transport system regulatory protein PhoU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MTDKHLSSQFDADLNAVSSKVLEMGGLVEAQITEAMFALNEFDRQAAERVISNEDRLNHMEVEIDEECGNIIARRQPAAR DLRLLMSISKTITNLERAGDEAEKIAKRVRRLADEPLARGVNIAEIKVSGDMAVTILRRALDAFARLDTVAAAQIVKDDK EIDQEFRAFVRKLVSYMQEDPRTISVGLDFLFIAKAIERIGDHAKNIAEFIIYIVKGTDVRHQPRDLLDREANS
Sequences:
>Translated_234_residues MTDKHLSSQFDADLNAVSSKVLEMGGLVEAQITEAMFALNEFDRQAAERVISNEDRLNHMEVEIDEECGNIIARRQPAAR DLRLLMSISKTITNLERAGDEAEKIAKRVRRLADEPLARGVNIAEIKVSGDMAVTILRRALDAFARLDTVAAAQIVKDDK EIDQEFRAFVRKLVSYMQEDPRTISVGLDFLFIAKAIERIGDHAKNIAEFIIYIVKGTDVRHQPRDLLDREANS >Mature_233_residues TDKHLSSQFDADLNAVSSKVLEMGGLVEAQITEAMFALNEFDRQAAERVISNEDRLNHMEVEIDEECGNIIARRQPAARD LRLLMSISKTITNLERAGDEAEKIAKRVRRLADEPLARGVNIAEIKVSGDMAVTILRRALDAFARLDTVAAAQIVKDDKE IDQEFRAFVRKLVSYMQEDPRTISVGLDFLFIAKAIERIGDHAKNIAEFIIYIVKGTDVRHQPRDLLDREANS
Specific function: Not known; probably involved in phosphate transport and/or metabolism [H]
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoU family [H]
Homologues:
Organism=Escherichia coli, GI1790161, Length=231, Percent_Identity=46.3203463203463, Blast_Score=203, Evalue=9e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008170 [H]
Pfam domain/function: PF01895 PhoU [H]
EC number: NA
Molecular weight: Translated: 26349; Mature: 26218
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDKHLSSQFDADLNAVSSKVLEMGGLVEAQITEAMFALNEFDRQAAERVISNEDRLNHM CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHH EVEIDEECGNIIARRQPAARDLRLLMSISKTITNLERAGDEAEKIAKRVRRLADEPLARG HEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC VNIAEIKVSGDMAVTILRRALDAFARLDTVAAAQIVKDDKEIDQEFRAFVRKLVSYMQED CCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PRTISVGLDFLFIAKAIERIGDHAKNIAEFIIYIVKGTDVRHQPRDLLDREANS CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCC >Mature Secondary Structure TDKHLSSQFDADLNAVSSKVLEMGGLVEAQITEAMFALNEFDRQAAERVISNEDRLNHM CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHH EVEIDEECGNIIARRQPAARDLRLLMSISKTITNLERAGDEAEKIAKRVRRLADEPLARG HEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC VNIAEIKVSGDMAVTILRRALDAFARLDTVAAAQIVKDDKEIDQEFRAFVRKLVSYMQED CCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PRTISVGLDFLFIAKAIERIGDHAKNIAEFIIYIVKGTDVRHQPRDLLDREANS CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10383982 [H]