| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026745
Identifier: 238026745
GI number: 238026745
Start: 1212841
End: 1213521
Strand: Direct
Name: 238026745
Synonym: bglu_1g11030
Alternate gene names: NA
Gene position: 1212841-1213521 (Clockwise)
Preceding gene: 238026743
Following gene: 238026750
Centisome position: 31.05
GC content: 71.66
Gene sequence:
>681_bases ATGTCCGCCCCCGACGATCTCTACCACTACTACGAGCCGGCCGCCGGCCACGGCCTCGCCCACGATCCGTTCAACGCGAT CGTCGGACCGCGCCCGATCGGCTGGATCTCCAGCGTCGATGCCGACGGTCGTCCGAATCTCGCCCCCTACAGCTTCTTCA ACGGCTTCAACTACAAGCCGCCGCTCGTCGGCTTCGCGAGCCTGGGCTGGAAGGACAGCGTGGCCAACATCAACGCGACC GGCGAATTCGTCTGGAACCTGACCACGCGGGCGCTCGCCGAGCAGATGAACATCAGTTGCGCGCCGCTGCCGCGCGGCGA GAGCGAGGCGGCCGTGGCGCGGCTCGAACTGGCGCCATCGCGGCGCGTGCGGGCACCGCGCGTGGCGGCCAGCCCCGCCC ACTTCGAATGCCGCAAGACGCAGATCGTGCGCCTCACCGATGCCGGCGGCGGCGAGCTGGACACCTGGCTGGTGCTGGGC GAGGTGGTGGCCGTGCACATCCGCCGCGAACTGCTGCGCGACGGCGTGTATCGCACCGCCGAGGCGCGCCCGGTGCTGCG CGCGGGCGGCCGCGGCGATTACGCGGTGATCGAGCCGGCGGCGATGTTCGAGCTGGCGCGCCCGCAGTCGCCCGAGGAGG CCGAGCGGATGGGGCAGGCGTTCGATCTCGGCGGCCGCTGA
Upstream 100 bases:
>100_bases GGCGGCGATTCCGGTACTGTTGCGGACGTTGCCCGCCGGGCGGCGCGCGCCCGGGCGCCGCCGCCGGCCGGCGTCGATTC ATCGCCTTGCAGGAGCTTCC
Downstream 100 bases:
>100_bases GCCGCGCCGGCCGCCCGGCCGGCGGCCCTAGCGCGCCGGCATCTTCTGCACCAGCTCGATGATCTTGCGGGTCGGCACGC TGACCGCGAGCGTCGCGAAG
Product: nitrilotriacetate monooxygenase component B
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MSAPDDLYHYYEPAAGHGLAHDPFNAIVGPRPIGWISSVDADGRPNLAPYSFFNGFNYKPPLVGFASLGWKDSVANINAT GEFVWNLTTRALAEQMNISCAPLPRGESEAAVARLELAPSRRVRAPRVAASPAHFECRKTQIVRLTDAGGGELDTWLVLG EVVAVHIRRELLRDGVYRTAEARPVLRAGGRGDYAVIEPAAMFELARPQSPEEAERMGQAFDLGGR
Sequences:
>Translated_226_residues MSAPDDLYHYYEPAAGHGLAHDPFNAIVGPRPIGWISSVDADGRPNLAPYSFFNGFNYKPPLVGFASLGWKDSVANINAT GEFVWNLTTRALAEQMNISCAPLPRGESEAAVARLELAPSRRVRAPRVAASPAHFECRKTQIVRLTDAGGGELDTWLVLG EVVAVHIRRELLRDGVYRTAEARPVLRAGGRGDYAVIEPAAMFELARPQSPEEAERMGQAFDLGGR >Mature_225_residues SAPDDLYHYYEPAAGHGLAHDPFNAIVGPRPIGWISSVDADGRPNLAPYSFFNGFNYKPPLVGFASLGWKDSVANINATG EFVWNLTTRALAEQMNISCAPLPRGESEAAVARLELAPSRRVRAPRVAASPAHFECRKTQIVRLTDAGGGELDTWLVLGE VVAVHIRRELLRDGVYRTAEARPVLRAGGRGDYAVIEPAAMFELARPQSPEEAERMGQAFDLGGR
Specific function: Unknown
COG id: COG1853
COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flavoredoxin family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002563 - InterPro: IPR012349 - InterPro: IPR009002 [H]
Pfam domain/function: PF01613 Flavin_Reduct [H]
EC number: NA
Molecular weight: Translated: 24596; Mature: 24465
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPDDLYHYYEPAAGHGLAHDPFNAIVGPRPIGWISSVDADGRPNLAPYSFFNGFNYKP CCCCHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCHHCCCCCCCCCCCCCHHHHCCCCCCC PLVGFASLGWKDSVANINATGEFVWNLTTRALAEQMNISCAPLPRGESEAAVARLELAPS CCCCHHHCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCEECCCCCCCCHHHHEEEECCCC RRVRAPRVAASPAHFECRKTQIVRLTDAGGGELDTWLVLGEVVAVHIRRELLRDGVYRTA CCCCCCCCCCCCCCCEECCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCC EARPVLRAGGRGDYAVIEPAAMFELARPQSPEEAERMGQAFDLGGR CCCHHHHCCCCCCEEEECHHHHHHHCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure SAPDDLYHYYEPAAGHGLAHDPFNAIVGPRPIGWISSVDADGRPNLAPYSFFNGFNYKP CCCHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCHHCCCCCCCCCCCCCHHHHCCCCCCC PLVGFASLGWKDSVANINATGEFVWNLTTRALAEQMNISCAPLPRGESEAAVARLELAPS CCCCHHHCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCEECCCCCCCCHHHHEEEECCCC RRVRAPRVAASPAHFECRKTQIVRLTDAGGGELDTWLVLGEVVAVHIRRELLRDGVYRTA CCCCCCCCCCCCCCCEECCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCC EARPVLRAGGRGDYAVIEPAAMFELARPQSPEEAERMGQAFDLGGR CCCHHHHCCCCCCEEEECHHHHHHHCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463; 11017201 [H]