| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is argT [H]
Identifier: 238026663
GI number: 238026663
Start: 1095781
End: 1096578
Strand: Direct
Name: argT [H]
Synonym: bglu_1g10160
Alternate gene names: 238026663
Gene position: 1095781-1096578 (Clockwise)
Preceding gene: 238026662
Following gene: 238026666
Centisome position: 28.05
GC content: 67.67
Gene sequence:
>798_bases ATGAAGTTGAACTGGCGAAAGATGGCCGCATGCGCGGTGGCGACGGCCGCCGCGGTGTCCTTCCTGTCGGGCGCGCACGC GGCCGAGCTCAAGCAGATCCGTTTCGGCGTCGAGGCGTCGTATGCGCCGTTCGAATACAAGACGCCCGACGGCAAGCTCG CCGGTTTCGACGTCGACGTCGGCAATGCGGTCTGCGCGAAGCTGAAGGTGCCGTGCGTGTGGGTGGAGAACGACTTCGAC GGCCTGATCCCGGCGCTGCAGGCGCGCAAGTTCGACGCGATCAACTCCGACATGACGATCACGCCGCAGCGCCTGCACGC GATCGCGTTCACCGATCCGATCTACTCGATCCCGAACCAGCTGATCGCGAAGAAGGGCAGCGGCCTGCTGCCGACGCCGG CCTCGCTAAAGGGCAAGCGGGTGGGCGTGCTGCAGGGCACGATCCAGGAGGCCTACGCGAAGGCGCGCTGGGCGCCGGCC GGCGTCGAGGTGGTGCCCTACCAGACCCAGGATCTGGCCTACGCCGACCTGCAGTCGGGCCGGCTCGACGCGACCTTCCA GGATTCGGAGGCGGCCGCCAAGGGCTTCCTGTCGAAGCCGCAGGCAGCCGGGTTCGCGTTCGCCGGCCCGCAGGTGGTGG ACGCCGAGATCCTCGGCTCGGGCGTCGGCTACGGCCTGCGCAAGAACGACACGGCGCTGCGCGCCGCGCTCAACCAGGCG CTCAAGGAGCTGAAGGCGGACGGTACGATCGACGCAATCGCGAAGAAGTATTTCAGCGTGCCGGTGGTGCTGAAGTAA
Upstream 100 bases:
>100_bases GCGCCGCCCGCGCGTTTGGTCCGGACGGCGTGCCCACGAGGCGCGTGTGATCCGGTTGTCGTAGCACCCTTCCTGAAGAA AGAGCGAGGAGAGCATTCCA
Downstream 100 bases:
>100_bases GCGGGCCGCGGGCGCGGGCGGCCGCCAGGCTCGCCCGGCGGCCGCGCCAAGGCGGCCGGGCCGGCGCTTCCCGGGCAAGG GGGGGCGCCGGCTTTTTTTC
Product: amino acid ABC transporter periplasmic amino acid-binding protein
Products: ADP; phosphate; L-ornithine [Cytoplasm]; ADP; L-arginine [Cytoplasm]; L-lysine [Cytoplasm] [C]
Alternate protein names: LAO-binding protein [H]
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MKLNWRKMAACAVATAAAVSFLSGAHAAELKQIRFGVEASYAPFEYKTPDGKLAGFDVDVGNAVCAKLKVPCVWVENDFD GLIPALQARKFDAINSDMTITPQRLHAIAFTDPIYSIPNQLIAKKGSGLLPTPASLKGKRVGVLQGTIQEAYAKARWAPA GVEVVPYQTQDLAYADLQSGRLDATFQDSEAAAKGFLSKPQAAGFAFAGPQVVDAEILGSGVGYGLRKNDTALRAALNQA LKELKADGTIDAIAKKYFSVPVVLK
Sequences:
>Translated_265_residues MKLNWRKMAACAVATAAAVSFLSGAHAAELKQIRFGVEASYAPFEYKTPDGKLAGFDVDVGNAVCAKLKVPCVWVENDFD GLIPALQARKFDAINSDMTITPQRLHAIAFTDPIYSIPNQLIAKKGSGLLPTPASLKGKRVGVLQGTIQEAYAKARWAPA GVEVVPYQTQDLAYADLQSGRLDATFQDSEAAAKGFLSKPQAAGFAFAGPQVVDAEILGSGVGYGLRKNDTALRAALNQA LKELKADGTIDAIAKKYFSVPVVLK >Mature_265_residues MKLNWRKMAACAVATAAAVSFLSGAHAAELKQIRFGVEASYAPFEYKTPDGKLAGFDVDVGNAVCAKLKVPCVWVENDFD GLIPALQARKFDAINSDMTITPQRLHAIAFTDPIYSIPNQLIAKKGSGLLPTPASLKGKRVGVLQGTIQEAYAKARWAPA GVEVVPYQTQDLAYADLQSGRLDATFQDSEAAAKGFLSKPQAAGFAFAGPQVVDAEILGSGVGYGLRKNDTALRAALNQA LKELKADGTIDAIAKKYFSVPVVLK
Specific function: This periplasmic binding protein is involved in an arginine transport system. ArgT and histidine-binding protein J (hisJ) interact with a common membrane-bound receptor, hisP [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788649, Length=256, Percent_Identity=49.609375, Blast_Score=259, Evalue=1e-70, Organism=Escherichia coli, GI1788648, Length=232, Percent_Identity=50, Blast_Score=253, Evalue=1e-68, Organism=Escherichia coli, GI1787085, Length=246, Percent_Identity=37.8048780487805, Blast_Score=166, Evalue=2e-42, Organism=Escherichia coli, GI1787088, Length=238, Percent_Identity=35.2941176470588, Blast_Score=152, Evalue=3e-38, Organism=Escherichia coli, GI1788228, Length=264, Percent_Identity=33.3333333333333, Blast_Score=118, Evalue=4e-28, Organism=Escherichia coli, GI1787031, Length=252, Percent_Identity=32.1428571428571, Blast_Score=99, Evalue=3e-22,
Paralogues:
None
Copy number: 900 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 28161; Mature: 28161
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLNWRKMAACAVATAAAVSFLSGAHAAELKQIRFGVEASYAPFEYKTPDGKLAGFDVDV CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEECCCCCEEEEEEEC GNAVCAKLKVPCVWVENDFDGLIPALQARKFDAINSDMTITPQRLHAIAFTDPIYSIPNQ CCHHHHEEECCEEEEECCCCHHHHHHHHHHHHCCCCCCEECHHHHEEEEECCCHHHHHHH LIAKKGSGLLPTPASLKGKRVGVLQGTIQEAYAKARWAPAGVEVVPYQTQDLAYADLQSG HHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHCCC RLDATFQDSEAAAKGFLSKPQAAGFAFAGPQVVDAEILGSGVGYGLRKNDTALRAALNQA CCCCEECCHHHHHHHHCCCCCCCCEEECCCCEEHHHHHCCCCCCCCCCCHHHHHHHHHHH LKELKADGTIDAIAKKYFSVPVVLK HHHHCCCCCHHHHHHHHHCCCEEEC >Mature Secondary Structure MKLNWRKMAACAVATAAAVSFLSGAHAAELKQIRFGVEASYAPFEYKTPDGKLAGFDVDV CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEECCCCCEEEEEEEC GNAVCAKLKVPCVWVENDFDGLIPALQARKFDAINSDMTITPQRLHAIAFTDPIYSIPNQ CCHHHHEEECCEEEEECCCCHHHHHHHHHHHHCCCCCCEECHHHHEEEEECCCHHHHHHH LIAKKGSGLLPTPASLKGKRVGVLQGTIQEAYAKARWAPAGVEVVPYQTQDLAYADLQSG HHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHCCC RLDATFQDSEAAAKGFLSKPQAAGFAFAGPQVVDAEILGSGVGYGLRKNDTALRAALNQA CCCCEECCHHHHHHHHCCCCCCCCEEECCCCEEHHHHHCCCCCCCCCCCHHHHHHHHHHH LKELKADGTIDAIAKKYFSVPVVLK HHHHCCCCCHHHHHHHHHCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-ornithine [Periplasm]; H2O; ATP; L-arginine [Periplasm]; L-lysine [Periplasm] [C]
Specific reaction: ATP + L-ornithine [Periplasm] + H2O = ADP + phosphate + L-ornithine [Cytoplasm] ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] ATP + L-lysine [Periplasm] + H2O = ADP + phosphate + L-lysine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 3040734; 9298646 [H]