| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026640
Identifier: 238026640
GI number: 238026640
Start: 1067058
End: 1068161
Strand: Direct
Name: 238026640
Synonym: bglu_1g09920
Alternate gene names: NA
Gene position: 1067058-1068161 (Clockwise)
Preceding gene: 238026639
Following gene: 238026641
Centisome position: 27.31
GC content: 74.28
Gene sequence:
>1104_bases TTGGCGAGAACGAAAATCACGCGCGCGAGTCCGGCCCCTGGCGCCGGCGTCATTTTCGCGTTGCGCGCGATCGGTCTCGT GCTGTTCGTCCGCTGGCTGCACGCCATGGCGCAGATGGCATGGTCGACGCTGTCGACCATGGCGTCGTCGCCGTGGGCCT GCGTGAACCTGGTGTTCCTGTTCCTGCTGATGACGCTGCCCGGCGCCGCCGCGCGCGCCGAGCGGCCGAGCCATCCGCTG CCGCAATGGCTGCGGCAGGCGCTGCGCCTGTTCGCGCTGCTCGGCTTACTGTTCGCCGTCTGGTCGGTCGGCGCGTTCGT CTGGTTCGCCGGCTGGCGCCGTGCGCTGCACGCGGTGGTGGCGAGCAACGGCTGGCTGGTGGTCGCGCCGGTGCTTTATG CCGCCGTGGTATGGATCTGCCGCCCGCAGCCGCTCTGGCGCACCAATATCGCCGCCCGCCGCTTCGCGATCGGCCGCTAC GCGATCTCGCTCGACGTGCTCACGCGCACCGTGGTGGTCTGGATGGAAAGCCGCAAGGTCGGGCAATACGATGCGCGCGA GCTGGCGATTCGCTGGCCGCGCGGCACCGTGCTGCCGCCTCCCGCGGTGGTCGAGCCGCCGGCCGTGGTGGCCATGTCCG CGACCGCCGCGCTCGAGCCGGAGGCGGCGATCGCACCGGGCGGCGCCGCTGCTGCGGCCGACGCCGGCCCCTCGCTCGAC GCCGGCGCGGCGGCCGCGCCCGTTCATGCTGTCGAGCCGGCGGGCGGCGCGGATTCGGGCCGGGACCCGGCCCTGTCGCC CCCCCGGTCAGAGCCGTTGATAGCAAGCTCCGGGCCCGCGGCGGCGCCCGCCGCCGCCGAGACGGCCGCCGCGGACGGGG CGGGGCCGGCATCGGCCGAACCGGACCGCGCCCGGCCCGGCGTGCCGGCGAGCTCGGATATTCCGCGCGGCCGGCCGTTC TCGCGGCCGAAGGTCGAACTGCTCTGGAATTCGCCGGCGGCGGTCGGTCATAATCGCAAGCTCGTGATGCGCGCGCCGCT CGCGACCGAGGGCGATCGCGCCGCCGCGCGCGCACTCGATGCGACCTTGCGGCAGTTCGGCTGA
Upstream 100 bases:
>100_bases TGGCTGCAATGCGACGGCTTTCGTCTGACGCGGCAGGTCATGCCCCTATAATGGCCGTTTCGTAAAATCCGGCACCGGCG AGATCGACAGGAGAGAGGTT
Downstream 100 bases:
>100_bases CATCCTCCAGGCGGCACGATCGCCTCGCGGAGCGGCGGTCGGGCCGCCTGCCTCAAAGTCCTGCGGGCCGCGCCGCGTGG GTGCGGCATGGCCGTCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MARTKITRASPAPGAGVIFALRAIGLVLFVRWLHAMAQMAWSTLSTMASSPWACVNLVFLFLLMTLPGAAARAERPSHPL PQWLRQALRLFALLGLLFAVWSVGAFVWFAGWRRALHAVVASNGWLVVAPVLYAAVVWICRPQPLWRTNIAARRFAIGRY AISLDVLTRTVVVWMESRKVGQYDARELAIRWPRGTVLPPPAVVEPPAVVAMSATAALEPEAAIAPGGAAAAADAGPSLD AGAAAAPVHAVEPAGGADSGRDPALSPPRSEPLIASSGPAAAPAAAETAAADGAGPASAEPDRARPGVPASSDIPRGRPF SRPKVELLWNSPAAVGHNRKLVMRAPLATEGDRAAARALDATLRQFG
Sequences:
>Translated_367_residues MARTKITRASPAPGAGVIFALRAIGLVLFVRWLHAMAQMAWSTLSTMASSPWACVNLVFLFLLMTLPGAAARAERPSHPL PQWLRQALRLFALLGLLFAVWSVGAFVWFAGWRRALHAVVASNGWLVVAPVLYAAVVWICRPQPLWRTNIAARRFAIGRY AISLDVLTRTVVVWMESRKVGQYDARELAIRWPRGTVLPPPAVVEPPAVVAMSATAALEPEAAIAPGGAAAAADAGPSLD AGAAAAPVHAVEPAGGADSGRDPALSPPRSEPLIASSGPAAAPAAAETAAADGAGPASAEPDRARPGVPASSDIPRGRPF SRPKVELLWNSPAAVGHNRKLVMRAPLATEGDRAAARALDATLRQFG >Mature_366_residues ARTKITRASPAPGAGVIFALRAIGLVLFVRWLHAMAQMAWSTLSTMASSPWACVNLVFLFLLMTLPGAAARAERPSHPLP QWLRQALRLFALLGLLFAVWSVGAFVWFAGWRRALHAVVASNGWLVVAPVLYAAVVWICRPQPLWRTNIAARRFAIGRYA ISLDVLTRTVVVWMESRKVGQYDARELAIRWPRGTVLPPPAVVEPPAVVAMSATAALEPEAAIAPGGAAAAADAGPSLDA GAAAAPVHAVEPAGGADSGRDPALSPPRSEPLIASSGPAAAPAAAETAAADGAGPASAEPDRARPGVPASSDIPRGRPFS RPKVELLWNSPAAVGHNRKLVMRAPLATEGDRAAARALDATLRQFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38442; Mature: 38311
Theoretical pI: Translated: 11.61; Mature: 11.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARTKITRASPAPGAGVIFALRAIGLVLFVRWLHAMAQMAWSTLSTMASSPWACVNLVFL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH FLLMTLPGAAARAERPSHPLPQWLRQALRLFALLGLLFAVWSVGAFVWFAGWRRALHAVV HHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASNGWLVVAPVLYAAVVWICRPQPLWRTNIAARRFAIGRYAISLDVLTRTVVVWMESRKV HCCCCEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GQYDARELAIRWPRGTVLPPPAVVEPPAVVAMSATAALEPEAAIAPGGAAAAADAGPSLD CCCCHHHHEEECCCCCCCCCCCCCCCCCCEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCC AGAAAAPVHAVEPAGGADSGRDPALSPPRSEPLIASSGPAAAPAAAETAAADGAGPASAE CCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHCCCCCCCCCCC PDRARPGVPASSDIPRGRPFSRPKVELLWNSPAAVGHNRKLVMRAPLATEGDRAAARALD CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCHHHHHHHHH ATLRQFG HHHHHCC >Mature Secondary Structure ARTKITRASPAPGAGVIFALRAIGLVLFVRWLHAMAQMAWSTLSTMASSPWACVNLVFL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH FLLMTLPGAAARAERPSHPLPQWLRQALRLFALLGLLFAVWSVGAFVWFAGWRRALHAVV HHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASNGWLVVAPVLYAAVVWICRPQPLWRTNIAARRFAIGRYAISLDVLTRTVVVWMESRKV HCCCCEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GQYDARELAIRWPRGTVLPPPAVVEPPAVVAMSATAALEPEAAIAPGGAAAAADAGPSLD CCCCHHHHEEECCCCCCCCCCCCCCCCCCEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCC AGAAAAPVHAVEPAGGADSGRDPALSPPRSEPLIASSGPAAAPAAAETAAADGAGPASAE CCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHCCCCCCCCCCC PDRARPGVPASSDIPRGRPFSRPKVELLWNSPAAVGHNRKLVMRAPLATEGDRAAARALD CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCHHHHHHHHH ATLRQFG HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA