| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026597
Identifier: 238026597
GI number: 238026597
Start: 1022065
End: 1022448
Strand: Direct
Name: 238026597
Synonym: bglu_1g09430
Alternate gene names: NA
Gene position: 1022065-1022448 (Clockwise)
Preceding gene: 238026596
Following gene: 238026598
Centisome position: 26.16
GC content: 70.31
Gene sequence:
>384_bases ATGAGCGACGAGGCGGTGTTCGTCTGCGCGTCGGACGCGCTCGTCGACGGCGGGCTCGGCGTGCGACAGACGGCGCGTCT GCGCGGCGAGGAGGTGGTCGTATTCTTCGTTCGCTATGACGGGCGCGCCTACGGTTACTTGAACCGCTGCGCGCACGTGC CGATGGAGTTGGACTGGAACGAGGGCCAGTTCTTCGAATCCTCGGGCCTCTACCTGATGTGCGCCACGCATGGCGCGATC TACGCGCCCGACACCGGCAAATGCGTCGGCGGCCCGTGCCGCGGCGCGCGCTTGCGTGCCGTCGCGGTCGACGAGCGCGA CACGCCCGAGGGCCGCGCCGTCTACTGGCTGCCCGACGGCGAACTGCGGCCGTCGGCGTCCTGA
Upstream 100 bases:
>100_bases TGGCCTATGGCGCGCATTCCGCCGAGTCGCTGGCCGCGCTGGCGCCGCGTTTCATTGCCGCCGACGTGAGCGCGCTCGCC GACTGGCTGCGCCAGCACGC
Downstream 100 bases:
>100_bases CGCGTCGCCGATTTTTCTTTTCCGACCCTCACTGGCCCACGCATGACCGACCAACCGATTTCTCCCGATTCCTCCGGCAC CGCGCGCGGCGCCGGCCATG
Product: Rieske family iron-sulfur cluster-binding protein
Products: NA
Alternate protein names: Rieske Domain Protein; Rieske Region; Ferredoxin; Rieske Protein; Rieske; Rieske Iron-Sulfur Domain Protein; Rieske 2Fe-2S Family Protein; Nitrite Reductase Ferredoxin Subunit; Rieske Iron-Sulphur Domain Protein; Ferredoxin Protein; Rieske Iron-Sulfur Domain-Containing Protein
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MSDEAVFVCASDALVDGGLGVRQTARLRGEEVVVFFVRYDGRAYGYLNRCAHVPMELDWNEGQFFESSGLYLMCATHGAI YAPDTGKCVGGPCRGARLRAVAVDERDTPEGRAVYWLPDGELRPSAS
Sequences:
>Translated_127_residues MSDEAVFVCASDALVDGGLGVRQTARLRGEEVVVFFVRYDGRAYGYLNRCAHVPMELDWNEGQFFESSGLYLMCATHGAI YAPDTGKCVGGPCRGARLRAVAVDERDTPEGRAVYWLPDGELRPSAS >Mature_126_residues SDEAVFVCASDALVDGGLGVRQTARLRGEEVVVFFVRYDGRAYGYLNRCAHVPMELDWNEGQFFESSGLYLMCATHGAIY APDTGKCVGGPCRGARLRAVAVDERDTPEGRAVYWLPDGELRPSAS
Specific function: Unknown
COG id: COG2146
COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13868; Mature: 13737
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDEAVFVCASDALVDGGLGVRQTARLRGEEVVVFFVRYDGRAYGYLNRCAHVPMELDWN CCCCEEEEEECCEEEECCCCCCCHHHCCCCEEEEEEEEECCEEEEECHHHCCCCEEEECC EGQFFESSGLYLMCATHGAIYAPDTGKCVGGPCRGARLRAVAVDERDTPEGRAVYWLPDG CCCEEECCCCEEEEECCCEEECCCCCCEECCCCCCCEEEEEEECCCCCCCCCEEEECCCC ELRPSAS CCCCCCC >Mature Secondary Structure SDEAVFVCASDALVDGGLGVRQTARLRGEEVVVFFVRYDGRAYGYLNRCAHVPMELDWN CCCEEEEEECCEEEECCCCCCCHHHCCCCEEEEEEEEECCEEEEECHHHCCCCEEEECC EGQFFESSGLYLMCATHGAIYAPDTGKCVGGPCRGARLRAVAVDERDTPEGRAVYWLPDG CCCEEECCCCEEEEECCCEEECCCCCCEECCCCCCCEEEEEEECCCCCCCCCEEEECCCC ELRPSAS CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA