Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is yejE [H]
Identifier: 238025547
GI number: 238025547
Start: 2783131
End: 2784240
Strand: Reverse
Name: yejE [H]
Synonym: bglu_2g22440
Alternate gene names: 238025547
Gene position: 2784240-2783131 (Counterclockwise)
Preceding gene: 238025548
Following gene: 238025546
Centisome position: 98.48
GC content: 66.58
Gene sequence:
>1110_bases ATGTCCTCGTCGACCCCCGCATCCAATTCTCCCGCCTGGACCACTGATCCGGTGGCGGGCCTGCAGGCCTCGCCGTCGCC GTGGCGGCGCACCTGGCGGCGGTTTCGCGGCCAGCCGCTCGGCTACTGGAGCTTCGTGATCTTCACCACGCTGTTCGTGG TGAGCCTGTTCGCCGAGGTGCTCTCGAACGACCGGCCGCTGGTGGTGCGCTACGACGGGCATTACTACTTCCCGATCGTG AAGGACTATCCCGAGACGCTGTTCGGCGGCGACTTCCCGGCCAAGACCAACTATCTCGACCCGTACATCCGCAAGCGCCT CGAGAAGCACGGCAACTTCGCGATCTATCCGCCGAGCCACTACCACTACGACACGATCGACTACTTCGCCACCAGCCCGT ATCCGGCGCCGCCCTCGGCCAGCAACTGGCTCGGCACCGACCAGTACGGGCGCGACGTGCTCGCGCGGCTGATCTACGGA TTCCGGCTGTCGGTGCTGATGGCGTTCGCGCTGACGGTCTCGGGGGTGGTGATCGGGGTCGCCACGGGGGCGCTGCAGGG ATTCTACGGCGGGCGCACCGACCTGATCGGCCAGCGCCTGATCGAGATCTGGAGCGCGATGCCCGACCTCTACCTGCTGA TCATTTTCGCCTCGATCTTCAACCCCTCGCTGTGGCTGCTGTTCCTGCTGCTGTCGATGTTCGGCTGGCTGGTGCTGTCC GACTACGTGCGCGCCGAATTCCTGCGCAACCGCGCGCTCGATTACGTGAAGGCCGCGCGCACCATGGGCCTGACCAACGG CCAGATCATCTGGCGCCACGTACTGCCCAACAGCCTCACGCCCGTCATCACCTTCCTGCCGTTCCGCATGAGCGCGGCGA TCCTGTCGCTGACCAGCCTCGACTTCCTCGGGCTGGGCGTGCCGCCGCCCACGCCGAGCCTGGGCGAACTGCTGCAGGAG GGCAAGAGCAATCTCGACGCCTGGTGGATCTCGATCTCGGCATTCGCCGCGCTGGTGGTCACGCTGCTGCTGCTGACCTT CATGGGCGACGCGCTGCGCAACGCGCTCGACACGCGCACGCGCGGTTCGGCCTTCGGCGGAGGCAAGTGA
Upstream 100 bases:
>100_bases TACGACTCGGTGATCCGCCGCGATTACCCGGTCGTGCTCGGCTCGCTGTTCCTGTTCACGCTGATCGGCCTCATCACCAA ACTCATCGCTGACGTCTGCT
Downstream 100 bases:
>100_bases TGGCGGCACCGTTGTTGCAGATCGAGAACTTCTCGGCGAAGTTCGGCGGGCGGGCCGCCGTGCGGGACCTCTCGCTCGCG GTGGCGCGCGGCGAGCGCGT
Product: ABC transporter inner membrane subunit
Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 369; Mature: 368
Protein sequence:
>369_residues MSSSTPASNSPAWTTDPVAGLQASPSPWRRTWRRFRGQPLGYWSFVIFTTLFVVSLFAEVLSNDRPLVVRYDGHYYFPIV KDYPETLFGGDFPAKTNYLDPYIRKRLEKHGNFAIYPPSHYHYDTIDYFATSPYPAPPSASNWLGTDQYGRDVLARLIYG FRLSVLMAFALTVSGVVIGVATGALQGFYGGRTDLIGQRLIEIWSAMPDLYLLIIFASIFNPSLWLLFLLLSMFGWLVLS DYVRAEFLRNRALDYVKAARTMGLTNGQIIWRHVLPNSLTPVITFLPFRMSAAILSLTSLDFLGLGVPPPTPSLGELLQE GKSNLDAWWISISAFAALVVTLLLLTFMGDALRNALDTRTRGSAFGGGK
Sequences:
>Translated_369_residues MSSSTPASNSPAWTTDPVAGLQASPSPWRRTWRRFRGQPLGYWSFVIFTTLFVVSLFAEVLSNDRPLVVRYDGHYYFPIV KDYPETLFGGDFPAKTNYLDPYIRKRLEKHGNFAIYPPSHYHYDTIDYFATSPYPAPPSASNWLGTDQYGRDVLARLIYG FRLSVLMAFALTVSGVVIGVATGALQGFYGGRTDLIGQRLIEIWSAMPDLYLLIIFASIFNPSLWLLFLLLSMFGWLVLS DYVRAEFLRNRALDYVKAARTMGLTNGQIIWRHVLPNSLTPVITFLPFRMSAAILSLTSLDFLGLGVPPPTPSLGELLQE GKSNLDAWWISISAFAALVVTLLLLTFMGDALRNALDTRTRGSAFGGGK >Mature_368_residues SSSTPASNSPAWTTDPVAGLQASPSPWRRTWRRFRGQPLGYWSFVIFTTLFVVSLFAEVLSNDRPLVVRYDGHYYFPIVK DYPETLFGGDFPAKTNYLDPYIRKRLEKHGNFAIYPPSHYHYDTIDYFATSPYPAPPSASNWLGTDQYGRDVLARLIYGF RLSVLMAFALTVSGVVIGVATGALQGFYGGRTDLIGQRLIEIWSAMPDLYLLIIFASIFNPSLWLLFLLLSMFGWLVLSD YVRAEFLRNRALDYVKAARTMGLTNGQIIWRHVLPNSLTPVITFLPFRMSAAILSLTSLDFLGLGVPPPTPSLGELLQEG KSNLDAWWISISAFAALVVTLLLLTFMGDALRNALDTRTRGSAFGGGK
Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4239
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788505, Length=326, Percent_Identity=49.3865030674847, Blast_Score=345, Evalue=3e-96, Organism=Escherichia coli, GI1787054, Length=242, Percent_Identity=29.7520661157025, Blast_Score=130, Evalue=1e-31, Organism=Escherichia coli, GI1787498, Length=252, Percent_Identity=33.7301587301587, Blast_Score=128, Evalue=6e-31, Organism=Escherichia coli, GI1787760, Length=228, Percent_Identity=33.3333333333333, Blast_Score=128, Evalue=7e-31, Organism=Escherichia coli, GI1789964, Length=253, Percent_Identity=35.5731225296443, Blast_Score=117, Evalue=9e-28, Organism=Escherichia coli, GI1787549, Length=250, Percent_Identity=30, Blast_Score=95, Evalue=8e-21, Organism=Escherichia coli, GI1789889, Length=223, Percent_Identity=25.1121076233184, Blast_Score=84, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 41210; Mature: 41079
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSTPASNSPAWTTDPVAGLQASPSPWRRTWRRFRGQPLGYWSFVIFTTLFVVSLFAEV CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH LSNDRPLVVRYDGHYYFPIVKDYPETLFGGDFPAKTNYLDPYIRKRLEKHGNFAIYPPSH HCCCCCEEEEECCEEEECCHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCC YHYDTIDYFATSPYPAPPSASNWLGTDQYGRDVLARLIYGFRLSVLMAFALTVSGVVIGV CCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATGALQGFYGGRTDLIGQRLIEIWSAMPDLYLLIIFASIFNPSLWLLFLLLSMFGWLVLS HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH DYVRAEFLRNRALDYVKAARTMGLTNGQIIWRHVLPNSLTPVITFLPFRMSAAILSLTSL HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH DFLGLGVPPPTPSLGELLQEGKSNLDAWWISISAFAALVVTLLLLTFMGDALRNALDTRT HHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RGSAFGGGK CCCCCCCCC >Mature Secondary Structure SSSTPASNSPAWTTDPVAGLQASPSPWRRTWRRFRGQPLGYWSFVIFTTLFVVSLFAEV CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH LSNDRPLVVRYDGHYYFPIVKDYPETLFGGDFPAKTNYLDPYIRKRLEKHGNFAIYPPSH HCCCCCEEEEECCEEEECCHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCC YHYDTIDYFATSPYPAPPSASNWLGTDQYGRDVLARLIYGFRLSVLMAFALTVSGVVIGV CCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATGALQGFYGGRTDLIGQRLIEIWSAMPDLYLLIIFASIFNPSLWLLFLLLSMFGWLVLS HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH DYVRAEFLRNRALDYVKAARTMGLTNGQIIWRHVLPNSLTPVITFLPFRMSAAILSLTSL HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH DFLGLGVPPPTPSLGELLQEGKSNLDAWWISISAFAALVVTLLLLTFMGDALRNALDTRT HHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RGSAFGGGK CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; oligopeptides [Periplasm]; H2O [C]
Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]