Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
---|---|
Accession | NC_012721 |
Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is xylX [H]
Identifier: 238025433
GI number: 238025433
Start: 2631055
End: 2632443
Strand: Reverse
Name: xylX [H]
Synonym: bglu_2g21230
Alternate gene names: 238025433
Gene position: 2632443-2631055 (Counterclockwise)
Preceding gene: 238025434
Following gene: 238025432
Centisome position: 93.11
GC content: 63.5
Gene sequence:
>1389_bases GTGAATGCAGGGAAAGTTACGTCGCAATGGCAGGAATTCGTCGAAGGATGCCTCGATTTCCGCCCGGACGAGGGCGTCTA CCGCATTGCCCGAGACATGTTTACCGAGCCGCAACTGTTCGATCTGGAGATGGAGTTCATCTTCGAGAAGAACTGGATTT ACGCGTGTCACGAGAGCGAGATTCCCCAGCCGCACGACTTCGTGACCATGCGGGCGGGCCGCCAGCCGCTGATCGTCTCG CGCGGCGGCAACGGCGAGCTGAACGCCATGATCAATGCCTGCCAGCATCGCGGCGCAACGCTCACGCGCATGGGCAAGGG CAACCAGTCCACCTTCACCTGTCCGTTTCATGCGTGGTGCTACAAGAGCGACGGGCGCCTCGTGAAGGTCAAGGCGCCGG GCGAGTATGGCGAGGACTTCGACAAGTCCAAGCGGGGTCTCAAGAAGGCGCGCATCGCCAGCTACAAGGGCTTCGTGTTC GTCAGCCTCGACGCGGCCGGCACCGACACGCTCGAAGACTATCTGGGCGACGCGCGCGTCTTCCTCGACATGATGGTGGC GCAGTCGCCCACCGGCGAGCTGGAAGTGCTGCCGGGCAAGTCCACCTACACCTACGAGGGAAACTGGAAGCTGCAGAACG AGAACGGCCTCGACGGCTATCACGTGAGTACCGTGCACTACAACTACGTCGCCACGGTGCAGCATCGGCAGGAGGCGAAC GCGCGCAAGGGCGGCGCGACGGCCGGGACGCTCGACTACAGCAAGCTGGGCGCGGGCGATGCGGATACCGACGACGGCTG GTTCGCGTTCCGCAACGGTCACAGCGTGCTGTTCAGCGACATGCCCAACCCGAGCGTGCGCCCCGGCTATGCCTCCGTCA TGCCGCGCCTCGTGGCTGCCCACGGCCAGCAGAAGGCCGAGTGGATGATGCACCGGCTGCGCAACCTGAACGTCTATCCG AGCCTGTTCTTCATGGACCAGATCAGTTCGCAGCTGCGCATCGTGCGCCCGGTCGCCTGGAACAAGACCGAAATCATCAG CCAGTGCATCGGAGTGAAAGGCGAATCGGACAGCGACCGCGAAAGCCGCATTCGCCAGTTCGAGGACTTCTTCAACGTAT CGGGAATGGGCACGCCCGACGATCTCGTGGAATTCCGCGAGCAGCAGCGCGGCTTCCAGGCGCGCCTCGAACGCTGGAGC GACGTGTCGCGCGGGCATCAGAAATGGGTGGCGGGGGAGACGGCAAACACGCGCCTGCTCGGCATCGCCCCCGTGCTGTG CGGTACCGAGCTGACCCATGAGGGGCTTTACGTCAACCAGCACGGCGCCTGGCAGAAGTTTCTGATGCAGGGGCTCGCAC AACGATCGAATGCCGGGAAGGAGGATTGA
Upstream 100 bases:
>100_bases AAGGCGATCAGGTGGATAGCGGCCGAATCGGCCCGGGTATTCAATCGAGTCCATCAAGGACCAGGCGGCAAGGCCGCCGA GCAGCCGGAGGGTACCCATC
Downstream 100 bases:
>100_bases ATCATGGCTGTCACGCATGCGCTGCAACAATCGGTCGAGCAGTTTCTGTACCGGATGGCCGAGCTTTGCGACGCCCAGAG CTGGGACGAGTACCTCGACC
Product: anthranilate 1,2-dioxygenase subunit alpha
Products: catechol; CO2; NAD+; NADP+; NH3
Alternate protein names: NA
Number of amino acids: Translated: 462; Mature: 462
Protein sequence:
>462_residues MNAGKVTSQWQEFVEGCLDFRPDEGVYRIARDMFTEPQLFDLEMEFIFEKNWIYACHESEIPQPHDFVTMRAGRQPLIVS RGGNGELNAMINACQHRGATLTRMGKGNQSTFTCPFHAWCYKSDGRLVKVKAPGEYGEDFDKSKRGLKKARIASYKGFVF VSLDAAGTDTLEDYLGDARVFLDMMVAQSPTGELEVLPGKSTYTYEGNWKLQNENGLDGYHVSTVHYNYVATVQHRQEAN ARKGGATAGTLDYSKLGAGDADTDDGWFAFRNGHSVLFSDMPNPSVRPGYASVMPRLVAAHGQQKAEWMMHRLRNLNVYP SLFFMDQISSQLRIVRPVAWNKTEIISQCIGVKGESDSDRESRIRQFEDFFNVSGMGTPDDLVEFREQQRGFQARLERWS DVSRGHQKWVAGETANTRLLGIAPVLCGTELTHEGLYVNQHGAWQKFLMQGLAQRSNAGKED
Sequences:
>Translated_462_residues MNAGKVTSQWQEFVEGCLDFRPDEGVYRIARDMFTEPQLFDLEMEFIFEKNWIYACHESEIPQPHDFVTMRAGRQPLIVS RGGNGELNAMINACQHRGATLTRMGKGNQSTFTCPFHAWCYKSDGRLVKVKAPGEYGEDFDKSKRGLKKARIASYKGFVF VSLDAAGTDTLEDYLGDARVFLDMMVAQSPTGELEVLPGKSTYTYEGNWKLQNENGLDGYHVSTVHYNYVATVQHRQEAN ARKGGATAGTLDYSKLGAGDADTDDGWFAFRNGHSVLFSDMPNPSVRPGYASVMPRLVAAHGQQKAEWMMHRLRNLNVYP SLFFMDQISSQLRIVRPVAWNKTEIISQCIGVKGESDSDRESRIRQFEDFFNVSGMGTPDDLVEFREQQRGFQARLERWS DVSRGHQKWVAGETANTRLLGIAPVLCGTELTHEGLYVNQHGAWQKFLMQGLAQRSNAGKED >Mature_462_residues MNAGKVTSQWQEFVEGCLDFRPDEGVYRIARDMFTEPQLFDLEMEFIFEKNWIYACHESEIPQPHDFVTMRAGRQPLIVS RGGNGELNAMINACQHRGATLTRMGKGNQSTFTCPFHAWCYKSDGRLVKVKAPGEYGEDFDKSKRGLKKARIASYKGFVF VSLDAAGTDTLEDYLGDARVFLDMMVAQSPTGELEVLPGKSTYTYEGNWKLQNENGLDGYHVSTVHYNYVATVQHRQEAN ARKGGATAGTLDYSKLGAGDADTDDGWFAFRNGHSVLFSDMPNPSVRPGYASVMPRLVAAHGQQKAEWMMHRLRNLNVYP SLFFMDQISSQLRIVRPVAWNKTEIISQCIGVKGESDSDRESRIRQFEDFFNVSGMGTPDDLVEFREQQRGFQARLERWS DVSRGHQKWVAGETANTRLLGIAPVLCGTELTHEGLYVNQHGAWQKFLMQGLAQRSNAGKED
Specific function: Part Of The Multicomponent 3-Phenylpropionate Dioxygenase. Converts 3-Phenylpropionic Acid (Pp) Into Cis-3-(3- Carboxyethyl)-3,5-Cyclohexadiene-1,2-Diol (Pp-Dihydrodiol). [C]
COG id: COG4638
COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Rieske domain [H]
Homologues:
Organism=Escherichia coli, GI1788888, Length=379, Percent_Identity=28.4960422163588, Blast_Score=145, Evalue=5e-36, Organism=Escherichia coli, GI1788103, Length=213, Percent_Identity=30.5164319248826, Blast_Score=105, Evalue=6e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017639 - InterPro: IPR017941 - InterPro: IPR015881 - InterPro: IPR015879 - InterPro: IPR001663 [H]
Pfam domain/function: PF00355 Rieske; PF00848 Ring_hydroxyl_A [H]
EC number: 1.14.12.1
Molecular weight: Translated: 52066; Mature: 52066
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: PS00570 RING_HYDROXYL_ALPHA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAGKVTSQWQEFVEGCLDFRPDEGVYRIARDMFTEPQLFDLEMEFIFEKNWIYACHESE CCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEEEEEEEECCEEEEECCCC IPQPHDFVTMRAGRQPLIVSRGGNGELNAMINACQHRGATLTRMGKGNQSTFTCPFHAWC CCCCCCEEEEECCCCCEEEECCCCCCHHHHHHHHHHCCCEEEECCCCCCCEEEECCEEEE YKSDGRLVKVKAPGEYGEDFDKSKRGLKKARIASYKGFVFVSLDAAGTDTLEDYLGDARV ECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCHHHH FLDMMVAQSPTGELEVLPGKSTYTYEGNWKLQNENGLDGYHVSTVHYNYVATVQHRQEAN HHHHHHHCCCCCCEEEECCCCEEEECCCEEECCCCCCCCEEEEEEEEEEEEEEHHHHHCC ARKGGATAGTLDYSKLGAGDADTDDGWFAFRNGHSVLFSDMPNPSVRPGYASVMPRLVAA CCCCCCCCCCCCHHHCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHH HGQQKAEWMMHRLRNLNVYPSLFFMDQISSQLRIVRPVAWNKTEIISQCIGVKGESDSDR CCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHCCCCCCCCHH ESRIRQFEDFFNVSGMGTPDDLVEFREQQRGFQARLERWSDVSRGHQKWVAGETANTRLL HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEE GIAPVLCGTELTHEGLYVNQHGAWQKFLMQGLAQRSNAGKED EEHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNAGKVTSQWQEFVEGCLDFRPDEGVYRIARDMFTEPQLFDLEMEFIFEKNWIYACHESE CCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEEEEEEEECCEEEEECCCC IPQPHDFVTMRAGRQPLIVSRGGNGELNAMINACQHRGATLTRMGKGNQSTFTCPFHAWC CCCCCCEEEEECCCCCEEEECCCCCCHHHHHHHHHHCCCEEEECCCCCCCEEEECCEEEE YKSDGRLVKVKAPGEYGEDFDKSKRGLKKARIASYKGFVFVSLDAAGTDTLEDYLGDARV ECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCHHHH FLDMMVAQSPTGELEVLPGKSTYTYEGNWKLQNENGLDGYHVSTVHYNYVATVQHRQEAN HHHHHHHCCCCCCEEEECCCCEEEECCCEEECCCCCCCCEEEEEEEEEEEEEEHHHHHCC ARKGGATAGTLDYSKLGAGDADTDDGWFAFRNGHSVLFSDMPNPSVRPGYASVMPRLVAA CCCCCCCCCCCCHHHCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHH HGQQKAEWMMHRLRNLNVYPSLFFMDQISSQLRIVRPVAWNKTEIISQCIGVKGESDSDR CCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHCCCCCCCCHH ESRIRQFEDFFNVSGMGTPDDLVEFREQQRGFQARLERWSDVSRGHQKWVAGETANTRLL HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEE GIAPVLCGTELTHEGLYVNQHGAWQKFLMQGLAQRSNAGKED EEHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: anthranilate; NADH; NADPH; H+; O2
Specific reaction: anthranilate + NAD(P)H + 2 H+ + O2 = catechol + CO2 + NAD(P)+ + NH3
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1740120; 1938949 [H]