Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025420
Identifier: 238025420
GI number: 238025420
Start: 2610339
End: 2610599
Strand: Reverse
Name: 238025420
Synonym: bglu_2g21090
Alternate gene names: NA
Gene position: 2610599-2610339 (Counterclockwise)
Preceding gene: 238025421
Following gene: 238025419
Centisome position: 92.33
GC content: 62.07
Gene sequence:
>261_bases ATGATGAATCTAGTGCGCCTCGGCGACGACACCGACCACGGCGGAAAAGTCATCACCGCCTCCACCACGATGCGCTTCGA CGGCCGTTTCGTGGCCCGCAAGGGCGACGAAGTGTCGTGTCCCCGGCATCCTGACGTAAAGCCCAATGTCATCGTCGAGG GAGACGCCTCGATGACTGACAACGGCGTGCCGATCGCGCGGCATGGACACAAGGCAACGTGCGGATGCGCGCTGATTTCG AGTTTAGCGGCCTCGGCATAG
Upstream 100 bases:
>100_bases AAACACATCGACCTGCCAGCGATCACGAAGAAGACCAAGACGCCGAGCGATCCTGGTGCGCTCGGCATACTCTATTTCCG CTACTGAACCGCCGACTTCC
Downstream 100 bases:
>100_bases CAGGCTCCGGGTCATCTTCACAATGAAGTGCGGGCCGTTATGCCGAGCGTCAGTGGCCTCGCATCGGCGTGCCGTGAATT CCCTTGAAGACTTCGCGCGG
Product: PAAR repeat-containing protein
Products: NA
Alternate protein names: PAAR Motif Family Protein; Paar Motif; Paar Repeat-Containing Protein; Conserved Protein
Number of amino acids: Translated: 86; Mature: 86
Protein sequence:
>86_residues MMNLVRLGDDTDHGGKVITASTTMRFDGRFVARKGDEVSCPRHPDVKPNVIVEGDASMTDNGVPIARHGHKATCGCALIS SLAASA
Sequences:
>Translated_86_residues MMNLVRLGDDTDHGGKVITASTTMRFDGRFVARKGDEVSCPRHPDVKPNVIVEGDASMTDNGVPIARHGHKATCGCALIS SLAASA >Mature_86_residues MMNLVRLGDDTDHGGKVITASTTMRFDGRFVARKGDEVSCPRHPDVKPNVIVEGDASMTDNGVPIARHGHKATCGCALIS SLAASA
Specific function: Unknown
COG id: COG4104
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9035; Mature: 9035
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 8.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNLVRLGDDTDHGGKVITASTTMRFDGRFVARKGDEVSCPRHPDVKPNVIVEGDASMTD CCCEEECCCCCCCCCEEEEEEEEEEECCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCC NGVPIARHGHKATCGCALISSLAASA CCCEEEECCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MMNLVRLGDDTDHGGKVITASTTMRFDGRFVARKGDEVSCPRHPDVKPNVIVEGDASMTD CCCEEECCCCCCCCCEEEEEEEEEEECCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCC NGVPIARHGHKATCGCALISSLAASA CCCEEEECCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA