Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025398
Identifier: 238025398
GI number: 238025398
Start: 2577870
End: 2579540
Strand: Reverse
Name: 238025398
Synonym: bglu_2g20850
Alternate gene names: NA
Gene position: 2579540-2577870 (Counterclockwise)
Preceding gene: 238025401
Following gene: 238025392
Centisome position: 91.24
GC content: 64.03
Gene sequence:
>1671_bases ATGGCTGACTCGCTTACTTGCCTGCTCCAGACCCTCCGACCATGCTTGAGCACGGAGCTTGTCGCCGCTTTGGTCAAGGA AGGTGTGGCGCCTGCGACGGCCCGGCAGCGCGTCTCGCGCTCGACGGAGATCAAGAAGCTCGCCCACCTTGTGTTCCCTC GAGGGGCGCGCTTCGTCTACCTGCAGAGCGACTACGCCTCGCCGGAGTTCTGGCACGAGCTCGTCAAGCGCCTTCTACAG CACAGCGCGTCGTACGGCGGCGGTCTTGCCGCCCTCATGGCCCGTGGCGGCGTCATGCCGGTCAGGCACTTTCTTATCGT GTGTGGCGCCCCCATCGCCCAGAAGGGCCACATCCCGGCCCAAGGCGTCCTTGACCGCCTCAAGAGTGCTCAATTGGTGA CGTGCTTCGACGCCCCGGGGATCGGTGAATGCATCGAGCTGGCTCAGACTGTCGAGGCAACGCCGTGGGAGCTCAACCGT CTGCGCGCACGCCTGAACACAGAGGCTGTGCTACTCAGCGCCGTCAAGGACTGGGCCCGGAACCTGGCGCTCGTGAGCTA CAACACCGTGGCACTCCGTGCCACGGACGGTGGTCAGCCGCGGGTGGGCACCTTCAACTGGGATCTGACCGGCGCCTCCT ACCTTGGCCCGCTCACGCAGTGGGACAAGGCCGCCAACAAGAAAAAGCCTGGCTATCTCGTCTGCGACGTGCTGCTCGGG GTCAACGTCGCCGCACACGAGCTCCAGCCGTTCATCAATAAATGCACCTCGCTGCGGGCGCTTGCGAAGGTGGGCCGCTG CATGCAGGTCTTTGTAGCGGATGGCTACACGCCGGAGGCCTTCGCGCTTGCGAGGGAGAGCGGTGTCGTTCCGGCGACCA CGACGAGCCTGTTTGGGCTCGAGGTCGCCAAGGCTCTTCGAGAGCTGACCGACATCCTCAAGGACGCATACCTGCGCCCG GACTCGTTCGATAGGGTCGCGGCTGTCTTCGACAAGCTCAGCCACATCGAGGGCGCTGCCACCAACCTGCGAGGCGCTCT ATTCGAGTACATCGTCGCTGACCTCGTGCGTCAGCGTGACCCGCACACGTCGATCGACCTCAACGAGATTCTCAAGGATG ACGCCGGCGGCCAGGCCGAGGTCGACGTTCTGGTCTATCACGCCAACCAGTCCGTCCGATTCATCGAGTGCAAGGGCTAC AAGCCCGGCGGCACCGTCCCTGACGAGATGGTCGAGGTCTGGCTAAAAGAGCGTATCCCAGTGATGCGACGTTCACCTCA GGCCACTTGGCAGTGGCGCGAGTGCAGGCAAGTCTTCGAGTACTGGACCAGCGGCGTACTGTCGGAGCGGGCCCGTGGGC TAATCGCGGACGAAGCGGCGCGCGTGAGGCGCTACGACTTTCGGGTTGTCGAAGGTGACGAACTGGGGCGCTTGGTTGCT AGTACTAACAGTACCGCCCTCAAGAAGACGTTCCGCCAGCATTTCCAGGCACACCCCCTGAGTGAGATCGAACGCGTCGC CAAGCGGCCGCCTCGGCGTCTGGCCATTCCGCCCTCGTCCCGACTCTCGACCCGCAACCCGTCGGATTTCGAAATCACGA CGCCGTTGCTCGGCGCACCGACGGCAGAAGATGACGCGCCCGACGACGTCGTCGACAGCTCCAATTCCTAG
Upstream 100 bases:
>100_bases CATGTTTCCACGGGCTCTCGCTGGGACTTGCGTTTTAGGACAGACCACGTAGTCAAGTGTTATAAATAGCGCAGTGTGAC ATCGTAGGCACTCGCATCCC
Downstream 100 bases:
>100_bases TCGCGGACGCCGACCCTCTAGCGACATCTCGAATGCCAATCAACTATCTCGCCGAATTTCCGATCCCCGCGCGCCTACTT CCGGCCAAGCTTCGGGCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 556; Mature: 555
Protein sequence:
>556_residues MADSLTCLLQTLRPCLSTELVAALVKEGVAPATARQRVSRSTEIKKLAHLVFPRGARFVYLQSDYASPEFWHELVKRLLQ HSASYGGGLAALMARGGVMPVRHFLIVCGAPIAQKGHIPAQGVLDRLKSAQLVTCFDAPGIGECIELAQTVEATPWELNR LRARLNTEAVLLSAVKDWARNLALVSYNTVALRATDGGQPRVGTFNWDLTGASYLGPLTQWDKAANKKKPGYLVCDVLLG VNVAAHELQPFINKCTSLRALAKVGRCMQVFVADGYTPEAFALARESGVVPATTTSLFGLEVAKALRELTDILKDAYLRP DSFDRVAAVFDKLSHIEGAATNLRGALFEYIVADLVRQRDPHTSIDLNEILKDDAGGQAEVDVLVYHANQSVRFIECKGY KPGGTVPDEMVEVWLKERIPVMRRSPQATWQWRECRQVFEYWTSGVLSERARGLIADEAARVRRYDFRVVEGDELGRLVA STNSTALKKTFRQHFQAHPLSEIERVAKRPPRRLAIPPSSRLSTRNPSDFEITTPLLGAPTAEDDAPDDVVDSSNS
Sequences:
>Translated_556_residues MADSLTCLLQTLRPCLSTELVAALVKEGVAPATARQRVSRSTEIKKLAHLVFPRGARFVYLQSDYASPEFWHELVKRLLQ HSASYGGGLAALMARGGVMPVRHFLIVCGAPIAQKGHIPAQGVLDRLKSAQLVTCFDAPGIGECIELAQTVEATPWELNR LRARLNTEAVLLSAVKDWARNLALVSYNTVALRATDGGQPRVGTFNWDLTGASYLGPLTQWDKAANKKKPGYLVCDVLLG VNVAAHELQPFINKCTSLRALAKVGRCMQVFVADGYTPEAFALARESGVVPATTTSLFGLEVAKALRELTDILKDAYLRP DSFDRVAAVFDKLSHIEGAATNLRGALFEYIVADLVRQRDPHTSIDLNEILKDDAGGQAEVDVLVYHANQSVRFIECKGY KPGGTVPDEMVEVWLKERIPVMRRSPQATWQWRECRQVFEYWTSGVLSERARGLIADEAARVRRYDFRVVEGDELGRLVA STNSTALKKTFRQHFQAHPLSEIERVAKRPPRRLAIPPSSRLSTRNPSDFEITTPLLGAPTAEDDAPDDVVDSSNS >Mature_555_residues ADSLTCLLQTLRPCLSTELVAALVKEGVAPATARQRVSRSTEIKKLAHLVFPRGARFVYLQSDYASPEFWHELVKRLLQH SASYGGGLAALMARGGVMPVRHFLIVCGAPIAQKGHIPAQGVLDRLKSAQLVTCFDAPGIGECIELAQTVEATPWELNRL RARLNTEAVLLSAVKDWARNLALVSYNTVALRATDGGQPRVGTFNWDLTGASYLGPLTQWDKAANKKKPGYLVCDVLLGV NVAAHELQPFINKCTSLRALAKVGRCMQVFVADGYTPEAFALARESGVVPATTTSLFGLEVAKALRELTDILKDAYLRPD SFDRVAAVFDKLSHIEGAATNLRGALFEYIVADLVRQRDPHTSIDLNEILKDDAGGQAEVDVLVYHANQSVRFIECKGYK PGGTVPDEMVEVWLKERIPVMRRSPQATWQWRECRQVFEYWTSGVLSERARGLIADEAARVRRYDFRVVEGDELGRLVAS TNSTALKKTFRQHFQAHPLSEIERVAKRPPRRLAIPPSSRLSTRNPSDFEITTPLLGAPTAEDDAPDDVVDSSNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61296; Mature: 61165
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADSLTCLLQTLRPCLSTELVAALVKEGVAPATARQRVSRSTEIKKLAHLVFPRGARFVY CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEE LQSDYASPEFWHELVKRLLQHSASYGGGLAALMARGGVMPVRHFLIVCGAPIAQKGHIPA EECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCH QGVLDRLKSAQLVTCFDAPGIGECIELAQTVEATPWELNRLRARLNTEAVLLSAVKDWAR HHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHH NLALVSYNTVALRATDGGQPRVGTFNWDLTGASYLGPLTQWDKAANKKKPGYLVCDVLLG CEEEEEECEEEEEECCCCCCCCEEEEECCCCHHHHCCHHHHHHHHCCCCCCEEEHHHHHC VNVAAHELQPFINKCTSLRALAKVGRCMQVFVADGYTPEAFALARESGVVPATTTSLFGL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHH EVAKALRELTDILKDAYLRPDSFDRVAAVFDKLSHIEGAATNLRGALFEYIVADLVRQRD HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC PHTSIDLNEILKDDAGGQAEVDVLVYHANQSVRFIECKGYKPGGTVPDEMVEVWLKERIP CCCCCCHHHHHHCCCCCCEEEEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCC VMRRSPQATWQWRECRQVFEYWTSGVLSERARGLIADEAARVRRYDFRVVEGDELGRLVA HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEECCHHHHHHHH STNSTALKKTFRQHFQAHPLSEIERVAKRPPRRLAIPPSSRLSTRNPSDFEITTPLLGAP CCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEECCCCCCC TAEDDAPDDVVDSSNS CCCCCCCCCCCCCCCC >Mature Secondary Structure ADSLTCLLQTLRPCLSTELVAALVKEGVAPATARQRVSRSTEIKKLAHLVFPRGARFVY CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEE LQSDYASPEFWHELVKRLLQHSASYGGGLAALMARGGVMPVRHFLIVCGAPIAQKGHIPA EECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCH QGVLDRLKSAQLVTCFDAPGIGECIELAQTVEATPWELNRLRARLNTEAVLLSAVKDWAR HHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHH NLALVSYNTVALRATDGGQPRVGTFNWDLTGASYLGPLTQWDKAANKKKPGYLVCDVLLG CEEEEEECEEEEEECCCCCCCCEEEEECCCCHHHHCCHHHHHHHHCCCCCCEEEHHHHHC VNVAAHELQPFINKCTSLRALAKVGRCMQVFVADGYTPEAFALARESGVVPATTTSLFGL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHH EVAKALRELTDILKDAYLRPDSFDRVAAVFDKLSHIEGAATNLRGALFEYIVADLVRQRD HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC PHTSIDLNEILKDDAGGQAEVDVLVYHANQSVRFIECKGYKPGGTVPDEMVEVWLKERIP CCCCCCHHHHHHCCCCCCEEEEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCC VMRRSPQATWQWRECRQVFEYWTSGVLSERARGLIADEAARVRRYDFRVVEGDELGRLVA HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEECCHHHHHHHH STNSTALKKTFRQHFQAHPLSEIERVAKRPPRRLAIPPSSRLSTRNPSDFEITTPLLGAP CCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEECCCCCCC TAEDDAPDDVVDSSNS CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA