Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025392
Identifier: 238025392
GI number: 238025392
Start: 2570885
End: 2571313
Strand: Reverse
Name: 238025392
Synonym: bglu_2g20760
Alternate gene names: NA
Gene position: 2571313-2570885 (Counterclockwise)
Preceding gene: 238025398
Following gene: 238025391
Centisome position: 90.94
GC content: 59.91
Gene sequence:
>429_bases ATGATGGCAGGGACGCGAACACACGAGGAGCAACAGAAGCTGCTGCTCGAAATCATCAAACGCTTTGACGGGTACATCAA CGCGACGAACTCGAAAATCGCGGTCGTACTGTCGTGTTGCACGGCCTACATCGGTGGCCTCGGCTTCAAGCCCGTCGACC TTTCCGATAAGCGCGAGCACGACTGGGCCTGGTGGGGCTTGCTCGCAGTCTCGCTGCTTTCGGTGCTCTCGACATTGGTC GCAGGCCAGTACGCGTACCCCGCCGCGCGCTCAAGCTGCAAACGCCAGCCGCCCGCGCGCCATACGAGAAACCCTCTGCT ATTTTTTTGCGATGTCGCCTCGCATGCCGGTGGCCGCGATGGCTACACAACTTACCTCGTGTCAATGACCGCGGAGGACG TGAATACAGACCTCTCGGCGCAGGCTTAA
Upstream 100 bases:
>100_bases CGGCAGACCCGGCGTAACGGAAACAAGCAGTAGGGGTGGCAGCGCGTCGCGGCCGTTCGTGCCGCGCTGCTCGAGCAAGA TTTGGCAGATTGTCGAGGGA
Downstream 100 bases:
>100_bases GTGCTCGCAACGATTGCAGCTTCGAAGTTTCGCCTGCTTGGCAGAGGTATCAACTGACTTGTCCGCGTGCAGTTGCCCTC GTTTGGCATTGTTCTGGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MMAGTRTHEEQQKLLLEIIKRFDGYINATNSKIAVVLSCCTAYIGGLGFKPVDLSDKREHDWAWWGLLAVSLLSVLSTLV AGQYAYPAARSSCKRQPPARHTRNPLLFFCDVASHAGGRDGYTTYLVSMTAEDVNTDLSAQA
Sequences:
>Translated_142_residues MMAGTRTHEEQQKLLLEIIKRFDGYINATNSKIAVVLSCCTAYIGGLGFKPVDLSDKREHDWAWWGLLAVSLLSVLSTLV AGQYAYPAARSSCKRQPPARHTRNPLLFFCDVASHAGGRDGYTTYLVSMTAEDVNTDLSAQA >Mature_142_residues MMAGTRTHEEQQKLLLEIIKRFDGYINATNSKIAVVLSCCTAYIGGLGFKPVDLSDKREHDWAWWGLLAVSLLSVLSTLV AGQYAYPAARSSCKRQPPARHTRNPLLFFCDVASHAGGRDGYTTYLVSMTAEDVNTDLSAQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15612; Mature: 15612
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMAGTRTHEEQQKLLLEIIKRFDGYINATNSKIAVVLSCCTAYIGGLGFKPVDLSDKREH CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC DWAWWGLLAVSLLSVLSTLVAGQYAYPAARSSCKRQPPARHTRNPLLFFCDVASHAGGRD CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCEEEEEECHHCCCCCC GYTTYLVSMTAEDVNTDLSAQA CCEEEEEEECHHHCCCCCCCCC >Mature Secondary Structure MMAGTRTHEEQQKLLLEIIKRFDGYINATNSKIAVVLSCCTAYIGGLGFKPVDLSDKREH CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC DWAWWGLLAVSLLSVLSTLVAGQYAYPAARSSCKRQPPARHTRNPLLFFCDVASHAGGRD CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCEEEEEECHHCCCCCC GYTTYLVSMTAEDVNTDLSAQA CCEEEEEEECHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA