Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025208
Identifier: 238025208
GI number: 238025208
Start: 2341593
End: 2343215
Strand: Reverse
Name: 238025208
Synonym: bglu_2g18790
Alternate gene names: NA
Gene position: 2343215-2341593 (Counterclockwise)
Preceding gene: 238025211
Following gene: 238025207
Centisome position: 82.88
GC content: 67.65
Gene sequence:
>1623_bases ATGACATCGCTATACATCACGGCAGCGCCGATTGGCGCCGTTCCCAAGTTTCTCGATCCGTTCGAGGCGACCTTTATTCC GTCTTTCCTGCTCGAGGGCTTTTTCGATGCCGACCGGTGTGCGTCGATTGCGGCCGATCTGAAGACGGACGGCTGGGAGG TGGTCCCGGCCGGTGGCCGGCTGCTGCAGGTCGGACATGCGCAACCGATCGACGAGCGCCTGCTGGCGGGCAACGCCCAG GCCGCCACGATCCGGCAGGCGCTGGAGGCGGCGCGGTGGACGCGGCGCGACGGTGCATGGCATCCGCCCCGGCTCGCGGC GCCGAACGCCGCGCACTTTCCGAAACCATGGCTCGCCGCGCTGTCGAATAAACTGGCACGCCGGATCGTGCTGCAATTGA CCACTTACGGGTGGATTGTTTCGGAGCAAGGCGATTTGCTCTGGGAGCATGAGCGCCAGCACCATTATTTGCCGCCCGCA TTGATCGAGGCGATTGAAAAAGAATCGCCGGCATTATTGAAGAATATGGAAGAGGCCGGCTGGATCGCCTGTGCGGCCGG TTATTGGCAGGCCGGCAAGGCGCGTTCGCCTTATCTGCCGATCACGCCGGAGGCGATCACCGAGGAAACCATTCGCTCGA TGCGCGCGGGCGCGGCGGTGGTGCATCTGCACACGCGCGATCTCAGCGATCGTCGGCGCATCGAGATTCCGGGCCTGGGC GTGGTGACGGTCGGCTCGCAGCGCAATCAGATCGTGCTCGACGACTACGACGCCATCGTGCCGATGGTGAAGAAGCGCGA GCCGGCCGCGATCCTGAACCTGTCCACCAGCGTGCGCGGCGACCGCCACGGCGCTCGCAGCAAGCTGCGGCGTGCGCATC TGAAGTTCTACGACGACGTGGGCTCGGCGCCCGAGGTCGCCTCGCTGAGCCCGGCCGCGGTGGTGTTCCAGGGCGGCGGC GGCTACGACAACGCGCCGGATTTCCTCGATGCGCAGTTCGACCATTTCGAACGGGTCGGCACGCGTCCCGAGGTGGAAGT GTTCAATCACGCGATCGTCGACAACGCCACCTCGCTCTATCGCGACCGGCTGCTGCGCACCGGCAAGCCGGTGCTGTTCA TGCTGGTGGCGGGCGTCGATCAATACCGGCGCGATCCGATCACCGGCGAGGTGGAAGACGACTCGCTGATCGCCCGCGTG GTGCGCGAGGAAATCTCGAGCCTGCTGGCCGACGAGAGCGCGGACTCGCACCGGCGCGCGGTCGAGCTCGCGATCGGGCA GCTGCGCCCGGTGGTCGAGCGGCTGCGGGCCAGCTTCCCGGTGTCGAAGATCTCGATCCTGCTGCCGGGGCCGATGCAGA ACCTGCTGGTCGACGTGGCGCTGGGGCTCGGGCTCGACGGCATCCGCGTGGGGCTGGAGGACGGCCTGACCGTCAACGAT GCGCGCGTGCCGGGCGGCGTGCGCAAGGCACGCGGTACCTGGGAACAGGTGAGCCTGGTGCGCGAGGAGCTGCTCGGCAG GGGCGCGACGATCCTCACGGCGGCCCAGGTGCGCGACATGTTCGGGCTCGGCATCAAGCCGGCCGCGCGTCGCGAGCGCG ACCCCCAGACCGCGGCGGGCTGA
Upstream 100 bases:
>100_bases TTAATCCGACATATACCTTTCAGATTAAATACGTCATGTAATAAGATTGAGCGGCAGTCAGGTGTTTGTAATTATAGATT CCATAGAGAGAGGGCCGTTC
Downstream 100 bases:
>100_bases GCGGGCCATGGCGATTTATCGACTCGGGGATCGCGTGCCGTCGATCCACCCCGACGCGTTCGTGGCCGATTCGGCGGACG TGATCGGCGACGTGCGGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 540; Mature: 539
Protein sequence:
>540_residues MTSLYITAAPIGAVPKFLDPFEATFIPSFLLEGFFDADRCASIAADLKTDGWEVVPAGGRLLQVGHAQPIDERLLAGNAQ AATIRQALEAARWTRRDGAWHPPRLAAPNAAHFPKPWLAALSNKLARRIVLQLTTYGWIVSEQGDLLWEHERQHHYLPPA LIEAIEKESPALLKNMEEAGWIACAAGYWQAGKARSPYLPITPEAITEETIRSMRAGAAVVHLHTRDLSDRRRIEIPGLG VVTVGSQRNQIVLDDYDAIVPMVKKREPAAILNLSTSVRGDRHGARSKLRRAHLKFYDDVGSAPEVASLSPAAVVFQGGG GYDNAPDFLDAQFDHFERVGTRPEVEVFNHAIVDNATSLYRDRLLRTGKPVLFMLVAGVDQYRRDPITGEVEDDSLIARV VREEISSLLADESADSHRRAVELAIGQLRPVVERLRASFPVSKISILLPGPMQNLLVDVALGLGLDGIRVGLEDGLTVND ARVPGGVRKARGTWEQVSLVREELLGRGATILTAAQVRDMFGLGIKPAARRERDPQTAAG
Sequences:
>Translated_540_residues MTSLYITAAPIGAVPKFLDPFEATFIPSFLLEGFFDADRCASIAADLKTDGWEVVPAGGRLLQVGHAQPIDERLLAGNAQ AATIRQALEAARWTRRDGAWHPPRLAAPNAAHFPKPWLAALSNKLARRIVLQLTTYGWIVSEQGDLLWEHERQHHYLPPA LIEAIEKESPALLKNMEEAGWIACAAGYWQAGKARSPYLPITPEAITEETIRSMRAGAAVVHLHTRDLSDRRRIEIPGLG VVTVGSQRNQIVLDDYDAIVPMVKKREPAAILNLSTSVRGDRHGARSKLRRAHLKFYDDVGSAPEVASLSPAAVVFQGGG GYDNAPDFLDAQFDHFERVGTRPEVEVFNHAIVDNATSLYRDRLLRTGKPVLFMLVAGVDQYRRDPITGEVEDDSLIARV VREEISSLLADESADSHRRAVELAIGQLRPVVERLRASFPVSKISILLPGPMQNLLVDVALGLGLDGIRVGLEDGLTVND ARVPGGVRKARGTWEQVSLVREELLGRGATILTAAQVRDMFGLGIKPAARRERDPQTAAG >Mature_539_residues TSLYITAAPIGAVPKFLDPFEATFIPSFLLEGFFDADRCASIAADLKTDGWEVVPAGGRLLQVGHAQPIDERLLAGNAQA ATIRQALEAARWTRRDGAWHPPRLAAPNAAHFPKPWLAALSNKLARRIVLQLTTYGWIVSEQGDLLWEHERQHHYLPPAL IEAIEKESPALLKNMEEAGWIACAAGYWQAGKARSPYLPITPEAITEETIRSMRAGAAVVHLHTRDLSDRRRIEIPGLGV VTVGSQRNQIVLDDYDAIVPMVKKREPAAILNLSTSVRGDRHGARSKLRRAHLKFYDDVGSAPEVASLSPAAVVFQGGGG YDNAPDFLDAQFDHFERVGTRPEVEVFNHAIVDNATSLYRDRLLRTGKPVLFMLVAGVDQYRRDPITGEVEDDSLIARVV REEISSLLADESADSHRRAVELAIGQLRPVVERLRASFPVSKISILLPGPMQNLLVDVALGLGLDGIRVGLEDGLTVNDA RVPGGVRKARGTWEQVSLVREELLGRGATILTAAQVRDMFGLGIKPAARRERDPQTAAG
Specific function: Unknown
COG id: COG3246
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59118; Mature: 58987
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLYITAAPIGAVPKFLDPFEATFIPSFLLEGFFDADRCASIAADLKTDGWEVVPAGGR CCEEEEEECCCCCCHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEECCCC LLQVGHAQPIDERLLAGNAQAATIRQALEAARWTRRDGAWHPPRLAAPNAAHFPKPWLAA EEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH LSNKLARRIVLQLTTYGWIVSEQGDLLWEHERQHHYLPPALIEAIEKESPALLKNMEEAG HHHHHHHHHHHHHHHHEEEEECCCCEEEHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHCC WIACAAGYWQAGKARSPYLPITPEAITEETIRSMRAGAAVVHLHTRDLSDRRRIEIPGLG EEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCEEECCCCE VVTVGSQRNQIVLDDYDAIVPMVKKREPAAILNLSTSVRGDRHGARSKLRRAHLKFYDDV EEEECCCCCEEEECCHHHHHHHHHCCCCCEEEECCHHCCCCHHHHHHHHHHHHHHHHHCC GSAPEVASLSPAAVVFQGGGGYDNAPDFLDAQFDHFERVGTRPEVEVFNHAIVDNATSLY CCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH RDRLLRTGKPVLFMLVAGVDQYRRDPITGEVEDDSLIARVVREEISSLLADESADSHRRA HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH VELAIGQLRPVVERLRASFPVSKISILLPGPMQNLLVDVALGLGLDGIRVGLEDGLTVND HHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCCCEEECCCCCCEEEC ARVPGGVRKARGTWEQVSLVREELLGRGATILTAAQVRDMFGLGIKPAARRERDPQTAAG CCCCCCHHHHCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCCCHHHCCCCCCCCCC >Mature Secondary Structure TSLYITAAPIGAVPKFLDPFEATFIPSFLLEGFFDADRCASIAADLKTDGWEVVPAGGR CEEEEEECCCCCCHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEECCCC LLQVGHAQPIDERLLAGNAQAATIRQALEAARWTRRDGAWHPPRLAAPNAAHFPKPWLAA EEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH LSNKLARRIVLQLTTYGWIVSEQGDLLWEHERQHHYLPPALIEAIEKESPALLKNMEEAG HHHHHHHHHHHHHHHHEEEEECCCCEEEHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHCC WIACAAGYWQAGKARSPYLPITPEAITEETIRSMRAGAAVVHLHTRDLSDRRRIEIPGLG EEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCEEECCCCE VVTVGSQRNQIVLDDYDAIVPMVKKREPAAILNLSTSVRGDRHGARSKLRRAHLKFYDDV EEEECCCCCEEEECCHHHHHHHHHCCCCCEEEECCHHCCCCHHHHHHHHHHHHHHHHHCC GSAPEVASLSPAAVVFQGGGGYDNAPDFLDAQFDHFERVGTRPEVEVFNHAIVDNATSLY CCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH RDRLLRTGKPVLFMLVAGVDQYRRDPITGEVEDDSLIARVVREEISSLLADESADSHRRA HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH VELAIGQLRPVVERLRASFPVSKISILLPGPMQNLLVDVALGLGLDGIRVGLEDGLTVND HHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCCCEEECCCCCCEEEC ARVPGGVRKARGTWEQVSLVREELLGRGATILTAAQVRDMFGLGIKPAARRERDPQTAAG CCCCCCHHHHCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCCCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA