Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is rstB [H]
Identifier: 238025150
GI number: 238025150
Start: 2269517
End: 2270671
Strand: Reverse
Name: rstB [H]
Synonym: bglu_2g18150
Alternate gene names: 238025150
Gene position: 2270671-2269517 (Counterclockwise)
Preceding gene: 238025151
Following gene: 238025148
Centisome position: 80.31
GC content: 72.47
Gene sequence:
>1155_bases ATGAGTGGGAATAGGACGGACCCGGGCCGCCGCGGCGCGGCCTGCCCGCCGCCCTCGCGCCTGCCGGCGCTGCGCTACCT GCGCTGGCGCTGGCTGCGCTTCCGGCGCTCGTGGACCGACACGCGTGCCGACCGCATGCCGAGCTGGTCGCGGCTCTACC TGCGCGCCTACCTGCATCTGATGAGCCTGGTGCTGACGGTGGTGGCGGTGCCGCTGCTGGCGCTGGCGGCCACGCTGTCG CCGCGCACCGTGCTGGCGGGCTTCGAGGCGCTGCCGGGCGGCGCGCTCGGCGTCGCGCTGTTCGTGATCGTGGTGCCGGC GCTCGCCACCTGGCGCTGGGCGCGCCCGACCTGGAGCGACCTCGTGATGGTGCGCGAGCGCGCCATCGATTTCAGCGGCG GGCGCTTCCACACGCGCGCGCGCGAATCGCACAGCGTGATCCTCGGGCCGCTCGCGCGCACGCTCAACGCGCTGGCGATG CGCATGGAGCGCCTGATCGAGGCGCAGCGCGACCTGACCAACGGCATCTCGCACGAGCTGCGCACGCCGCTGGCGCGCGT GCGCTTCGCGCTCGAGGCGCTGCGCGACCCGGCCTCCGACGCGGAGCGCCACGCCGCGCTCGACAGCATCGCGCAGGACG TGACGGAACTCGACGAGCTGATCGACATGAGCCTCACCTACGCGCGGCTCGAATACAGTTCGCTGCAATCGAACCAGGCG CCCACCGGGCTGGCCACCTGGCTCGAAACCCAGGTTCACGACGTCGCCCAGCTCGACCCGACCAAGCGCATCGAGATGCG CATCGGCGTGCCGCGCGAGCTGCGCGTGAACATGGATACGCGGCTGATGTCCTACGCGATCCGCAATCTGCTGCGCAATG CCGGCAAGTACGCGCGCTCGCGCATCGTGATCGGCGCGGCCGCCGGCGCCGACGGCGGCATCACCGTGTTCGTCGAGGAT GACGGCCCCGGCGTGCCCGACATCGAGCGCGAGCGGATCTTCGACGCGTTCGTGCGGCTGGACCGCCATACCGCGGGCTA CGGGCTCGGCCTCGCGATCACGCGGCAGGTGCTGCGGGCGCACCACGGCAACATCGTCGTGACCGACGCGCGCGAGCTGT CCGGCGCGCGTTTCGAGATCGGCTGGCCGGGCTGA
Upstream 100 bases:
>100_bases GACGGCCGCATCTCGAAGCTGCGCCGCAAGCTGCAGGACGACGCGAGCCACCCGCGCCGCATCAAGACGGTCCGCAGCAA GGGCTACCAGTTCAGCACCC
Downstream 100 bases:
>100_bases GGCCCGCCGGCCGCCGCGCCGCCTCGGCCGGGTTGCGGCCCGCGCGCCGTCCGTGCCCGAGCGGCGCTCAATAGGTCCGG CCGAGCTGGAAGTACAGGTT
Product: Signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MSGNRTDPGRRGAACPPPSRLPALRYLRWRWLRFRRSWTDTRADRMPSWSRLYLRAYLHLMSLVLTVVAVPLLALAATLS PRTVLAGFEALPGGALGVALFVIVVPALATWRWARPTWSDLVMVRERAIDFSGGRFHTRARESHSVILGPLARTLNALAM RMERLIEAQRDLTNGISHELRTPLARVRFALEALRDPASDAERHAALDSIAQDVTELDELIDMSLTYARLEYSSLQSNQA PTGLATWLETQVHDVAQLDPTKRIEMRIGVPRELRVNMDTRLMSYAIRNLLRNAGKYARSRIVIGAAAGADGGITVFVED DGPGVPDIERERIFDAFVRLDRHTAGYGLGLAITRQVLRAHHGNIVVTDARELSGARFEIGWPG
Sequences:
>Translated_384_residues MSGNRTDPGRRGAACPPPSRLPALRYLRWRWLRFRRSWTDTRADRMPSWSRLYLRAYLHLMSLVLTVVAVPLLALAATLS PRTVLAGFEALPGGALGVALFVIVVPALATWRWARPTWSDLVMVRERAIDFSGGRFHTRARESHSVILGPLARTLNALAM RMERLIEAQRDLTNGISHELRTPLARVRFALEALRDPASDAERHAALDSIAQDVTELDELIDMSLTYARLEYSSLQSNQA PTGLATWLETQVHDVAQLDPTKRIEMRIGVPRELRVNMDTRLMSYAIRNLLRNAGKYARSRIVIGAAAGADGGITVFVED DGPGVPDIERERIFDAFVRLDRHTAGYGLGLAITRQVLRAHHGNIVVTDARELSGARFEIGWPG >Mature_383_residues SGNRTDPGRRGAACPPPSRLPALRYLRWRWLRFRRSWTDTRADRMPSWSRLYLRAYLHLMSLVLTVVAVPLLALAATLSP RTVLAGFEALPGGALGVALFVIVVPALATWRWARPTWSDLVMVRERAIDFSGGRFHTRARESHSVILGPLARTLNALAMR MERLIEAQRDLTNGISHELRTPLARVRFALEALRDPASDAERHAALDSIAQDVTELDELIDMSLTYARLEYSSLQSNQAP TGLATWLETQVHDVAQLDPTKRIEMRIGVPRELRVNMDTRLMSYAIRNLLRNAGKYARSRIVIGAAAGADGGITVFVEDD GPGVPDIERERIFDAFVRLDRHTAGYGLGLAITRQVLRAHHGNIVVTDARELSGARFEIGWPG
Specific function: Member of the two-component regulatory system rstB/rstA. RstB functions as a membrane-associated protein kinase that phosphorylates rstA (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1787894, Length=294, Percent_Identity=35.7142857142857, Blast_Score=161, Evalue=7e-41, Organism=Escherichia coli, GI1790346, Length=237, Percent_Identity=31.2236286919831, Blast_Score=102, Evalue=4e-23, Organism=Escherichia coli, GI1788393, Length=241, Percent_Identity=29.8755186721992, Blast_Score=99, Evalue=5e-22, Organism=Escherichia coli, GI1790551, Length=231, Percent_Identity=29.4372294372294, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1789808, Length=268, Percent_Identity=27.6119402985075, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1788549, Length=258, Percent_Identity=27.1317829457364, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1786912, Length=221, Percent_Identity=33.4841628959276, Blast_Score=83, Evalue=3e-17, Organism=Escherichia coli, GI1787374, Length=257, Percent_Identity=28.4046692607004, Blast_Score=82, Evalue=8e-17, Organism=Escherichia coli, GI1786783, Length=244, Percent_Identity=28.2786885245902, Blast_Score=79, Evalue=6e-16, Organism=Escherichia coli, GI1786600, Length=229, Percent_Identity=27.5109170305677, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI1789403, Length=236, Percent_Identity=29.2372881355932, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1790861, Length=229, Percent_Identity=29.6943231441048, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI48994928, Length=223, Percent_Identity=26.9058295964126, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1790436, Length=227, Percent_Identity=25.9911894273128, Blast_Score=63, Evalue=3e-11, Organism=Escherichia coli, GI1789149, Length=203, Percent_Identity=28.0788177339901, Blast_Score=63, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 42849; Mature: 42718
Theoretical pI: Translated: 10.70; Mature: 10.70
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGNRTDPGRRGAACPPPSRLPALRYLRWRWLRFRRSWTDTRADRMPSWSRLYLRAYLHL CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH MSLVLTVVAVPLLALAATLSPRTVLAGFEALPGGALGVALFVIVVPALATWRWARPTWSD HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHH LVMVRERAIDFSGGRFHTRARESHSVILGPLARTLNALAMRMERLIEAQRDLTNGISHEL HHHHHHHHCCCCCCEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTPLARVRFALEALRDPASDAERHAALDSIAQDVTELDELIDMSLTYARLEYSSLQSNQA HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PTGLATWLETQVHDVAQLDPTKRIEMRIGVPRELRVNMDTRLMSYAIRNLLRNAGKYARS CCHHHHHHHHHHHHHHHCCCCHHEEEEECCCHHEECCHHHHHHHHHHHHHHHHHHHHHHH RIVIGAAAGADGGITVFVEDDGPGVPDIERERIFDAFVRLDRHTAGYGLGLAITRQVLRA EEEEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH HHGNIVVTDARELSGARFEIGWPG HCCCEEEECHHHHCCCEEECCCCC >Mature Secondary Structure SGNRTDPGRRGAACPPPSRLPALRYLRWRWLRFRRSWTDTRADRMPSWSRLYLRAYLHL CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH MSLVLTVVAVPLLALAATLSPRTVLAGFEALPGGALGVALFVIVVPALATWRWARPTWSD HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHH LVMVRERAIDFSGGRFHTRARESHSVILGPLARTLNALAMRMERLIEAQRDLTNGISHEL HHHHHHHHCCCCCCEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTPLARVRFALEALRDPASDAERHAALDSIAQDVTELDELIDMSLTYARLEYSSLQSNQA HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PTGLATWLETQVHDVAQLDPTKRIEMRIGVPRELRVNMDTRLMSYAIRNLLRNAGKYARS CCHHHHHHHHHHHHHHHCCCCHHEEEEECCCHHEECCHHHHHHHHHHHHHHHHHHHHHHH RIVIGAAAGADGGITVFVEDDGPGVPDIERERIFDAFVRLDRHTAGYGLGLAITRQVLRA EEEEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH HHGNIVVTDARELSGARFEIGWPG HCCCEEEECHHHHCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503; 2646639; 1925016; 1495392 [H]