Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025100
Identifier: 238025100
GI number: 238025100
Start: 2201332
End: 2202168
Strand: Reverse
Name: 238025100
Synonym: bglu_2g17570
Alternate gene names: NA
Gene position: 2202168-2201332 (Counterclockwise)
Preceding gene: 238025101
Following gene: 238025097
Centisome position: 77.89
GC content: 74.07
Gene sequence:
>837_bases ATGACGCCGCCCGTCATTGCCCTGGTGCTGTTCGCCGCGGTCCTGCACGCGACCTGGAACGCCGTGCTGCGCAGCGGCGC CGATCGCCTCTGGACCATCACCGTCATGAGCTTCGCGACCACCGCGGCGGCGCTCGCCTGTGCGCCGTGGCTGCCCTTGC CGGCGCGCGCGAGCTGGCCCTGCCTCGCGCTCTCGGCGCTGCTGCAGGTGGGTTACAGCGTGTTTCTGGCCCACGCGTAC AAGGGCGCGGAACTCGGCCAGGTGTATCCGATGGTGCGGGGCGCGATACCGGTGCTGGTGGCGCTCGGCGGCTATCTGTG GGCCGGCCAGCGCCTCGACGCGGGGGCGCTGGCCGGCGTGCTGCTGATCTCCGGCGGCATCGCGAGCCTGGTGCTGGGGC GCCGCCGGATTGCGCGGCGGCCGCTGGTGGCCGCGCTCGCCACCAGCCTGTTCGTTGCCGGCTACGTCACCACCGACGGC GTGGGAGCGAGGCTGGCCGGCGACTCGCGCGCCTACGCGGTCTGGATCTTCGTGGTCTACGGCGTGCTGATGCCGGCCGC CTTCGTGCTGCACGGGCGCCGGCTCGGCAGCGGCCATGCGTGGCGCGAGACCGCCAAGGCGGCGGCGGGCGGCGTGATCT CGATGATCGGCTACACGGCCACGGTCGCGGCGCTCTCGCTCGGGCCGATCGGGCCGGTCTCGGCGCTGCGCGAGACCAGC ATCGTGTTTTCGCTGATCCTCGGCTGGGCCTGCCTGGGCGAGCGCCCGACCGGGCAGCGGATCGCGGCTGCCGCGGCGGT CGTGGCCGGTGCCGCGTGCCTCGCGTATCGCGCCTGA
Upstream 100 bases:
>100_bases GGAATGAGGTCATCCACGTGTCGATTGCCGTTATCACGGCCGCGCCCGCGCCGGCCGCCTCATCGCTCCCGCCGCGTTCG CGCGTTCGCAGCCGGTGCCG
Downstream 100 bases:
>100_bases GGCAGGCCGGGCGCGGCGCTCACGAAGCGACCGCAGCGCGCCGGTCGGCCGCGCGCGACGCCAGGAAGCGTGCGCGCGCC AGCAGTTCGCCTTCGCGGAA
Product: drug/metabolite transporter superfamily permease
Products: NA
Alternate protein names: Transmembrane Protein; Integral Membrane; Inner Membrane Protein; Transporter DME Family DMT Superfamily; Transporter Of DMT Superfamily; Transporter Dme Family; Transporter Permease Protein; Drug/Metabolite Transporter Superfamily Protein; Drug/Metabolite Transporter Superfamily Permease; Drug/Metabolite Exporter Family Protein; Permease Protein; DMT Family Permease
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MTPPVIALVLFAAVLHATWNAVLRSGADRLWTITVMSFATTAAALACAPWLPLPARASWPCLALSALLQVGYSVFLAHAY KGAELGQVYPMVRGAIPVLVALGGYLWAGQRLDAGALAGVLLISGGIASLVLGRRRIARRPLVAALATSLFVAGYVTTDG VGARLAGDSRAYAVWIFVVYGVLMPAAFVLHGRRLGSGHAWRETAKAAAGGVISMIGYTATVAALSLGPIGPVSALRETS IVFSLILGWACLGERPTGQRIAAAAAVVAGAACLAYRA
Sequences:
>Translated_278_residues MTPPVIALVLFAAVLHATWNAVLRSGADRLWTITVMSFATTAAALACAPWLPLPARASWPCLALSALLQVGYSVFLAHAY KGAELGQVYPMVRGAIPVLVALGGYLWAGQRLDAGALAGVLLISGGIASLVLGRRRIARRPLVAALATSLFVAGYVTTDG VGARLAGDSRAYAVWIFVVYGVLMPAAFVLHGRRLGSGHAWRETAKAAAGGVISMIGYTATVAALSLGPIGPVSALRETS IVFSLILGWACLGERPTGQRIAAAAAVVAGAACLAYRA >Mature_277_residues TPPVIALVLFAAVLHATWNAVLRSGADRLWTITVMSFATTAAALACAPWLPLPARASWPCLALSALLQVGYSVFLAHAYK GAELGQVYPMVRGAIPVLVALGGYLWAGQRLDAGALAGVLLISGGIASLVLGRRRIARRPLVAALATSLFVAGYVTTDGV GARLAGDSRAYAVWIFVVYGVLMPAAFVLHGRRLGSGHAWRETAKAAAGGVISMIGYTATVAALSLGPIGPVSALRETSI VFSLILGWACLGERPTGQRIAAAAAVVAGAACLAYRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28632; Mature: 28501
Theoretical pI: Translated: 10.64; Mature: 10.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPPVIALVLFAAVLHATWNAVLRSGADRLWTITVMSFATTAAALACAPWLPLPARASWP CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCH CLALSALLQVGYSVFLAHAYKGAELGQVYPMVRGAIPVLVALGGYLWAGQRLDAGALAGV HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH LLISGGIASLVLGRRRIARRPLVAALATSLFVAGYVTTDGVGARLAGDSRAYAVWIFVVY HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEECCCCCHHHHHHHHHH GVLMPAAFVLHGRRLGSGHAWRETAKAAAGGVISMIGYTATVAALSLGPIGPVSALRETS HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH IVFSLILGWACLGERPTGQRIAAAAAVVAGAACLAYRA HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TPPVIALVLFAAVLHATWNAVLRSGADRLWTITVMSFATTAAALACAPWLPLPARASWP CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCH CLALSALLQVGYSVFLAHAYKGAELGQVYPMVRGAIPVLVALGGYLWAGQRLDAGALAGV HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH LLISGGIASLVLGRRRIARRPLVAALATSLFVAGYVTTDGVGARLAGDSRAYAVWIFVVY HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEECCCCCHHHHHHHHHH GVLMPAAFVLHGRRLGSGHAWRETAKAAAGGVISMIGYTATVAALSLGPIGPVSALRETS HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH IVFSLILGWACLGERPTGQRIAAAAAVVAGAACLAYRA HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA