Click here to switch to the map view.

The map label for this gene is nudF [H]

Identifier: 238025097

GI number: 238025097

Start: 2198316

End: 2198795

Strand: Reverse

Name: nudF [H]

Synonym: bglu_2g17540

Alternate gene names: 238025097

Gene position: 2198795-2198316 (Counterclockwise)

Preceding gene: 238025100

Following gene: 238025096

Centisome position: 77.77

GC content: 70.0

Gene sequence:

>480_bases
ATGGGCGAGCAATCGGGCGATGGCCCGCAGGCAGCGGCCGCCTGGCCGCGTGTCGCGGTGATCGCCGTGGTGTTTCGCGG
CGACGAGCTGATTCTCGTGCAGCGCGGGAAGGAGCCGCAGAAGGGCAGCTGGGGCTTTCCCGGCGGCTCGGTCGAGCCGG
GGGAGAGCCTGCACGACGCGGCGCGGCGCGAACTGATGGAGGAGACGGGCGTGCAGGCCGAGGTCGGCGAACTGGTCGAC
GTGGTCGAGGTGCGCGAGTTCGATGCGAGCGGCCGGCATCACCACTACGTGCTGATCGCGTTGCTGTGCCGCCACCTGAG
CGGCGAACCACGGCCCGGCGACGACGCGGTCGATTGCCGGTGGGTGCGGATGCCGGACGGCATTCAGGCGTTTCCCGGCG
TTCTGGCGGAGCACGTCGGCCGGGTCGGCCTGCGTGCCCACGAGATCAATCATTCCGATCGAGAGAGACGACAGCGATGA

Upstream 100 bases:

>100_bases
TTTCGGCGGCGGGCGGTTTTTCGGCGGCGGGCGGCGCGCTCGCCGGGCACCACCGAAGCGCAGCGGACGCCGCCGGCAAT
CCGAAGGAGAGCGAACCTTG

Downstream 100 bases:

>100_bases
AACGAATGTTCCTGGGTGGTCCGTTCAAGTCCCTGGTGGATCCCGCCACCGGCACGATGTCCGCCGAGCACATCAGCCAG
TTCGGCCGCGTGATCGAGCA

Product: MutT/nudix family protein

Products: NA

Alternate protein names: ADP-ribose diphosphatase; ADP-ribose phosphohydrolase; Adenosine diphosphoribose pyrophosphatase; ADPR-PPase [H]

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MGEQSGDGPQAAAAWPRVAVIAVVFRGDELILVQRGKEPQKGSWGFPGGSVEPGESLHDAARRELMEETGVQAEVGELVD
VVEVREFDASGRHHHYVLIALLCRHLSGEPRPGDDAVDCRWVRMPDGIQAFPGVLAEHVGRVGLRAHEINHSDRERRQR

Sequences:

>Translated_159_residues
MGEQSGDGPQAAAAWPRVAVIAVVFRGDELILVQRGKEPQKGSWGFPGGSVEPGESLHDAARRELMEETGVQAEVGELVD
VVEVREFDASGRHHHYVLIALLCRHLSGEPRPGDDAVDCRWVRMPDGIQAFPGVLAEHVGRVGLRAHEINHSDRERRQR
>Mature_158_residues
GEQSGDGPQAAAAWPRVAVIAVVFRGDELILVQRGKEPQKGSWGFPGGSVEPGESLHDAARRELMEETGVQAEVGELVDV
VEVREFDASGRHHHYVLIALLCRHLSGEPRPGDDAVDCRWVRMPDGIQAFPGVLAEHVGRVGLRAHEINHSDRERRQR

Specific function: Specific For Pyrimidine Substrates. Acts On 5-Methyl- Dctp, Ctp And Dctp In Decreasing Order. [C]

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: =3.6.1.13 [H]

Molecular weight: Translated: 17495; Mature: 17364

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEQSGDGPQAAAAWPRVAVIAVVFRGDELILVQRGKEPQKGSWGFPGGSVEPGESLHDA
CCCCCCCCCCHHHHCCCEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHH
ARRELMEETGVQAEVGELVDVVEVREFDASGRHHHYVLIALLCRHLSGEPRPGDDAVDCR
HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEE
WVRMPDGIQAFPGVLAEHVGRVGLRAHEINHSDRERRQR
EEECCCCHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHCC
>Mature Secondary Structure 
GEQSGDGPQAAAAWPRVAVIAVVFRGDELILVQRGKEPQKGSWGFPGGSVEPGESLHDA
CCCCCCCCCHHHHCCCEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHH
ARRELMEETGVQAEVGELVDVVEVREFDASGRHHHYVLIALLCRHLSGEPRPGDDAVDCR
HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEE
WVRMPDGIQAFPGVLAEHVGRVGLRAHEINHSDRERRQR
EEECCCCHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 9694840 [H]