Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
---|---|
Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is cyaA [H]
Identifier: 238025055
GI number: 238025055
Start: 2145559
End: 2147574
Strand: Reverse
Name: cyaA [H]
Synonym: bglu_2g17110
Alternate gene names: 238025055
Gene position: 2147574-2145559 (Counterclockwise)
Preceding gene: 238025056
Following gene: 238025054
Centisome position: 75.96
GC content: 62.7
Gene sequence:
>2016_bases ATGTTCGGAAAACTTACACTCGACGCGATTCCGTATCACGAGCCGATCCTCGTGGTCACGGCGCTCGGCGTCGGCATCAT GGGGGCCCTGGTGCTGGGTCTCGTCACTTACTTCGGTAAGTGGAAATATCTCTGGACCGAGTGGCTGACGAGCGTCGACC ACAAGCGTCTCGGCGTGATGTACATCGCCGTTGCCCTCGTCATGCTGCTGCGCGGCTTCGCCGACGCGATCATGATGCGT ACCCAGCTCGCGCTGGCGTACAACGCGCCGGGCTACCTGCCGCCGCACCACTACGACCAGATCTTCACCGCGCACGGCGT CATCATGATCTTCTTCATGGCGATGGCGTTCATGGTGGGTCTGATGAACCTGGTGGTGCCGCTGCAGATCGGCGCGCGCG ACGTGGCGTTCCCGTTCCTGAACTCGCTGTCGTTCTGGATGACGGCGGTGGGCGCGATCCTGCTGATGATCTCGCTGTTC ATCGGCGAATTCGCGCAGACCGGCTGGCTCGCGTACCCGCCGCTCTCGGAGCTGGCCTATAGTCCAGGGGTAGGGGTCGA CTACTACATCTGGGCGCTGCAGATCTCCGGGGTGGGCACGCTGCTGACCGGCGTGAACTTCTTCGTGACCATCATCAAGA TGCGCGCGCCGGGCATGACGCTGATGAAGATGCCCGTGTTCACCTGGACGGCGCTCTGCACCAACGTGCTGATCATGGCG GCGTTCCCGATCCTGACCGTCACGCTCGCGCTGCTCGGCCTCGACCGTTATCTGGGGATGCACTTCTTCACCAATGACGG CGGCGGCAACGTCATGATGTACCTGAACCTGATCTGGGCCTGGGGTCACCCCGAGGTGTACATCCTGATCCTGCCGGCGT TCGGCGTGTTCTCGGAAGTCGTGGCGACCTACGCGAAGAAGCCGCTGTTCGGCTACAAGACGATGGTCTACGCCACCTGC GCGATCATGGTCCTGTCGTTCCTCGTGTGGCTGCACCACTTCTTCACGATGGGCTCGGGCGCCGACGTCAATGCGTTCTT CGGCATCGCCACGATGATCATCGCGATCCCGACCGGCGTGAAGATCTTCAACTGGCTGTTTACGATCTACCGTGGCCGCC TGGAGTTCAGCGCGCCGATCCTCTGGACGCTCGGCTTCATGGTCACGTTCACGGTGGGCGGCATGACCGGCGTGATGATG GCGATCCCGGGCGCGGACTTCGTGCTGCATAACAGCCTGTTCCTGATCGCCCACTTCCACAACGTGATCATCGGCGGCGT GCTGTTCGGCTATCTGGCGGGCTTCAACTACTGGTTCCCGAAGGTGTTCGGCTTCAAGCTCAACGAGAAGCTCGGCAAGC GCGCGTTCTGGTTCTGGCAGCTCGGCTTCATCTTCGCCTTCACGCCGCTGTACGTGCTCGGCTTCATGGGCGTGACGCGT CGTCTGAACCACTACGACAACCCCGCATGGCATCCGTGGATGGAAGTCGCGCTGTTCGGCGCGGTGCTGGTGCTGATCGG CATCGTTCACCAGCTGCTGCAGCTGTACGTGTCGATCCGCGACCGCAACCTGCCGGGCAACCGTGACCTGACGGGCGACC CGTGGAACGGCCACACGCTCGAGTGGGCGACGTCCTCGCCGCCGGCGCCGTACAACTTCGCGATCATCCCGACGATCCAC GAGCTCGACGAAGTGTCGTATCGCAAGGAGCGCGGCCTCGGCTTCGGTCTGGAGAAGGGCCAGCAGTACGAGGACATCCA CATGCCCTCGAACACCAGCGCGGGCTTCTTCATCGGCATGTTCTCGCTGGTGCTCGGCTTTGCCGGCGTCTGGCACATCT GGTGGCTGGCCATCGTCGGCTTCGTCGGCATCGTTGCGACCGCGATCATCTACAGCTCGCAGAAGAACGAGGGCTACTAC ATTCCGGCCGACACGGTGCGGAAGATCGAAGAGCAGCGTGGTGGTGCGCGTGTCGCGGCACCGCGTCCTGCTGCAGTGGA ACTGGAGGCCAACTGA
Upstream 100 bases:
>100_bases CCGTCGATCCGCGCCTGTTCAATAACATCGTTGGCAAGTACAACAACGGCCACGTCATGGAATTCAATGACGCGTCGTGC AGTACGACGAAGGGGTAAGC
Downstream 100 bases:
>100_bases TGGCACAAAGCACCCTGACTGCCGATCACCATCACGCGGCAGAGCATCACCATCCGCCGTCGCATTCGGTGTTCGGCTTC TGGCTGTACCTGATGACCGA
Product: Ubiquinol oxidase subunit I
Products: NA
Alternate protein names: Cytochrome A1 subunit 1; Oxidase BA(3) subunit 1; Ubiquinol oxidase polypeptide I [H]
Number of amino acids: Translated: 671; Mature: 671
Protein sequence:
>671_residues MFGKLTLDAIPYHEPILVVTALGVGIMGALVLGLVTYFGKWKYLWTEWLTSVDHKRLGVMYIAVALVMLLRGFADAIMMR TQLALAYNAPGYLPPHHYDQIFTAHGVIMIFFMAMAFMVGLMNLVVPLQIGARDVAFPFLNSLSFWMTAVGAILLMISLF IGEFAQTGWLAYPPLSELAYSPGVGVDYYIWALQISGVGTLLTGVNFFVTIIKMRAPGMTLMKMPVFTWTALCTNVLIMA AFPILTVTLALLGLDRYLGMHFFTNDGGGNVMMYLNLIWAWGHPEVYILILPAFGVFSEVVATYAKKPLFGYKTMVYATC AIMVLSFLVWLHHFFTMGSGADVNAFFGIATMIIAIPTGVKIFNWLFTIYRGRLEFSAPILWTLGFMVTFTVGGMTGVMM AIPGADFVLHNSLFLIAHFHNVIIGGVLFGYLAGFNYWFPKVFGFKLNEKLGKRAFWFWQLGFIFAFTPLYVLGFMGVTR RLNHYDNPAWHPWMEVALFGAVLVLIGIVHQLLQLYVSIRDRNLPGNRDLTGDPWNGHTLEWATSSPPAPYNFAIIPTIH ELDEVSYRKERGLGFGLEKGQQYEDIHMPSNTSAGFFIGMFSLVLGFAGVWHIWWLAIVGFVGIVATAIIYSSQKNEGYY IPADTVRKIEEQRGGARVAAPRPAAVELEAN
Sequences:
>Translated_671_residues MFGKLTLDAIPYHEPILVVTALGVGIMGALVLGLVTYFGKWKYLWTEWLTSVDHKRLGVMYIAVALVMLLRGFADAIMMR TQLALAYNAPGYLPPHHYDQIFTAHGVIMIFFMAMAFMVGLMNLVVPLQIGARDVAFPFLNSLSFWMTAVGAILLMISLF IGEFAQTGWLAYPPLSELAYSPGVGVDYYIWALQISGVGTLLTGVNFFVTIIKMRAPGMTLMKMPVFTWTALCTNVLIMA AFPILTVTLALLGLDRYLGMHFFTNDGGGNVMMYLNLIWAWGHPEVYILILPAFGVFSEVVATYAKKPLFGYKTMVYATC AIMVLSFLVWLHHFFTMGSGADVNAFFGIATMIIAIPTGVKIFNWLFTIYRGRLEFSAPILWTLGFMVTFTVGGMTGVMM AIPGADFVLHNSLFLIAHFHNVIIGGVLFGYLAGFNYWFPKVFGFKLNEKLGKRAFWFWQLGFIFAFTPLYVLGFMGVTR RLNHYDNPAWHPWMEVALFGAVLVLIGIVHQLLQLYVSIRDRNLPGNRDLTGDPWNGHTLEWATSSPPAPYNFAIIPTIH ELDEVSYRKERGLGFGLEKGQQYEDIHMPSNTSAGFFIGMFSLVLGFAGVWHIWWLAIVGFVGIVATAIIYSSQKNEGYY IPADTVRKIEEQRGGARVAAPRPAAVELEAN >Mature_671_residues MFGKLTLDAIPYHEPILVVTALGVGIMGALVLGLVTYFGKWKYLWTEWLTSVDHKRLGVMYIAVALVMLLRGFADAIMMR TQLALAYNAPGYLPPHHYDQIFTAHGVIMIFFMAMAFMVGLMNLVVPLQIGARDVAFPFLNSLSFWMTAVGAILLMISLF IGEFAQTGWLAYPPLSELAYSPGVGVDYYIWALQISGVGTLLTGVNFFVTIIKMRAPGMTLMKMPVFTWTALCTNVLIMA AFPILTVTLALLGLDRYLGMHFFTNDGGGNVMMYLNLIWAWGHPEVYILILPAFGVFSEVVATYAKKPLFGYKTMVYATC AIMVLSFLVWLHHFFTMGSGADVNAFFGIATMIIAIPTGVKIFNWLFTIYRGRLEFSAPILWTLGFMVTFTVGGMTGVMM AIPGADFVLHNSLFLIAHFHNVIIGGVLFGYLAGFNYWFPKVFGFKLNEKLGKRAFWFWQLGFIFAFTPLYVLGFMGVTR RLNHYDNPAWHPWMEVALFGAVLVLIGIVHQLLQLYVSIRDRNLPGNRDLTGDPWNGHTLEWATSSPPAPYNFAIIPTIH ELDEVSYRKERGLGFGLEKGQQYEDIHMPSNTSAGFFIGMFSLVLGFAGVWHIWWLAIVGFVGIVATAIIYSSQKNEGYY IPADTVRKIEEQRGGARVAAPRPAAVELEAN
Specific function: Catalytic subunit of the enzyme. Electrons originating in a quinol are transferred to the bimetallic center formed by heme a and copper B [H]
COG id: COG0843
COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 1
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heme-copper respiratory oxidase family [H]
Homologues:
Organism=Homo sapiens, GI251831109, Length=526, Percent_Identity=38.9733840304183, Blast_Score=335, Evalue=9e-92, Organism=Escherichia coli, GI1786634, Length=654, Percent_Identity=69.5718654434251, Blast_Score=942, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6226519, Length=529, Percent_Identity=37.9962192816635, Blast_Score=350, Evalue=4e-97, Organism=Saccharomyces cerevisiae, GI6226524, Length=325, Percent_Identity=44, Blast_Score=259, Evalue=1e-69, Organism=Saccharomyces cerevisiae, GI6226523, Length=245, Percent_Identity=34.6938775510204, Blast_Score=140, Evalue=1e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000883 - InterPro: IPR014207 [H]
Pfam domain/function: PF00115 COX1 [H]
EC number: 1.10.3.-
Molecular weight: Translated: 74922; Mature: 74922
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: PS50855 COX1 ; PS00077 COX1_CUB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGKLTLDAIPYHEPILVVTALGVGIMGALVLGLVTYFGKWKYLWTEWLTSVDHKRLGVM CCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH YIAVALVMLLRGFADAIMMRTQLALAYNAPGYLPPHHYDQIFTAHGVIMIFFMAMAFMVG HHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LMNLVVPLQIGARDVAFPFLNSLSFWMTAVGAILLMISLFIGEFAQTGWLAYPPLSELAY HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCC SPGVGVDYYIWALQISGVGTLLTGVNFFVTIIKMRAPGMTLMKMPVFTWTALCTNVLIMA CCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH AFPILTVTLALLGLDRYLGMHFFTNDGGGNVMMYLNLIWAWGHPEVYILILPAFGVFSEV HHHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEEEEHEECCCCCEEEEEECCHHHHHHH VATYAKKPLFGYKTMVYATCAIMVLSFLVWLHHFFTMGSGADVNAFFGIATMIIAIPTGV HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCH KIFNWLFTIYRGRLEFSAPILWTLGFMVTFTVGGMTGVMMAIPGADFVLHNSLFLIAHFH HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHCCHHHHHHHH NVIIGGVLFGYLAGFNYWFPKVFGFKLNEKLGKRAFWFWQLGFIFAFTPLYVLGFMGVTR HHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RLNHYDNPAWHPWMEVALFGAVLVLIGIVHQLLQLYVSIRDRNLPGNRDLTGDPWNGHTL HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEE EWATSSPPAPYNFAIIPTIHELDEVSYRKERGLGFGLEKGQQYEDIHMPSNTSAGFFIGM EECCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH FSLVLGFAGVWHIWWLAIVGFVGIVATAIIYSSQKNEGYYIPADTVRKIEEQRGGARVAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHCCCCEEEC PRPAAVELEAN CCCCEEEEECC >Mature Secondary Structure MFGKLTLDAIPYHEPILVVTALGVGIMGALVLGLVTYFGKWKYLWTEWLTSVDHKRLGVM CCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH YIAVALVMLLRGFADAIMMRTQLALAYNAPGYLPPHHYDQIFTAHGVIMIFFMAMAFMVG HHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LMNLVVPLQIGARDVAFPFLNSLSFWMTAVGAILLMISLFIGEFAQTGWLAYPPLSELAY HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCC SPGVGVDYYIWALQISGVGTLLTGVNFFVTIIKMRAPGMTLMKMPVFTWTALCTNVLIMA CCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH AFPILTVTLALLGLDRYLGMHFFTNDGGGNVMMYLNLIWAWGHPEVYILILPAFGVFSEV HHHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEEEEHEECCCCCEEEEEECCHHHHHHH VATYAKKPLFGYKTMVYATCAIMVLSFLVWLHHFFTMGSGADVNAFFGIATMIIAIPTGV HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCH KIFNWLFTIYRGRLEFSAPILWTLGFMVTFTVGGMTGVMMAIPGADFVLHNSLFLIAHFH HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHCCHHHHHHHH NVIIGGVLFGYLAGFNYWFPKVFGFKLNEKLGKRAFWFWQLGFIFAFTPLYVLGFMGVTR HHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RLNHYDNPAWHPWMEVALFGAVLVLIGIVHQLLQLYVSIRDRNLPGNRDLTGDPWNGHTL HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEE EWATSSPPAPYNFAIIPTIHELDEVSYRKERGLGFGLEKGQQYEDIHMPSNTSAGFFIGM EECCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH FSLVLGFAGVWHIWWLAIVGFVGIVATAIIYSSQKNEGYYIPADTVRKIEEQRGGARVAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHCCCCEEEC PRPAAVELEAN CCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: Protoheme IX (Heme B55 and B562); Copper B. [C]
Metal ions: Fe; Cu [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Oxidoreductases [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8392509 [H]