Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is frzE [H]
Identifier: 238025038
GI number: 238025038
Start: 2123937
End: 2126432
Strand: Reverse
Name: frzE [H]
Synonym: bglu_2g16950
Alternate gene names: 238025038
Gene position: 2126432-2123937 (Counterclockwise)
Preceding gene: 238025039
Following gene: 238025037
Centisome position: 75.21
GC content: 73.36
Gene sequence:
>2496_bases ATGAGCCAAGACGACGACCTGAGCCGCCAGTCGCTGCTCGAGCTGTACCAGGAGGAGACCCAGACCCAGACCGAGGCGCT GTCGCGGCAGTTGCTCGCGCTCGAACATGGCGCGCAGGACGCGGCCGCATTCGAGGCCTGCATGCGCGCGGCGCATTCCC TGAAGGGCGCCGCGCGCATCGTCGGCGTGCCGCAGGGCGTGGAGATCGCCGGGCGCATGGAGGATTGCTTCGTCGGCGCG CAGCGCGGCGAGCGCGTGCTCGGCGCGAGCCACATCGACGCGCTGCTGATGGGCGTGGACCTGCTGGTGCGGGTCGGCGA TCCGCGCCGCGCCGCGTCGGTCACGCCGATCGAGATCGACGCGTTCGCGGTCGCGCTTGCCCATGCCGACGGTGCCGGCG ATGCCGGGCGCGCGGCGCCGGATGCGGCCGCGCCGCTGCCGCCGGGCTTCGCCTCGGGGGCCGTCTCGGCGCTGTCGGCC GACGCGCCGGGCAGCGCCGATTTCCCGGCGCTGGCGGATCTGTCCGCGCTGCTGCGGCTCGACGCGCCGGGCGCCGGGGC GTCCGACACAGCCGGCGTGCCGGGCGGATCGTTGGCCGCCGGCGCCGGGCCGCGCGAGGCCGAAGCGGCGCGGCCGGCCG ATCTGGCCGCCCAGCTGCGGCTGGCCGCCGACGCGGCGCCGGCCGCGAGGCCGCCGGCACCGCCGGCACCGCCGTCCGAG GCGCCGGCGGCGCCCGAGCCGGGCGGCGACGCCGGCCAGATGCGCCGCGTGCGCGCCGACAGCCTGAACCGGCTGCTGAG CCTGGCGGGCGAATCGCTGGTGGAATCGCGCTGGCTCAAGCCGTTCGCCGAATCGATGCAACGCATGCGGCGCACCCAGC GCGACGCGGCCCGCGCGCTCGATGCCTTGTACGACGCGCTCGCCGACGATCTCGACCCGGCCCGCGAGGCCGCGATGAGC GAGGTCCGGCAGATGCTCAACGACCTGCAGCGCACGTTCGCGGCCCGCATGGACGACCTGGACCGCTTCGAGCGGCGCAG CATGCACATCGCCGAGCAGCTCTACGACGAGGCGCTGCAGTGCCGGATGCGCCCGTTCGGCGATGCCACGCGCGCCTATC CGCGCATGGTCCGCGATCTGGCGCGCTCGCTCGGCAAGCGCGTGCGCTTCGCGATCGTCGGCGAGACCACCCAGGTCGAT CGCGACCTGCTCGACCTGCTCGACGCGCCGCTCGGCCACCTGCTGCGCAACGCGCTCGACCATGGCGTCGAGCCGCCCGA GACGCGGCTCGCGCGCGGCAAGCCGGCCGAGGCCGTCATCACGCTCGAGGCGCGCCACAGTGCCGGCTCGCTGCTCGTCA GCGTGACCGACGACGGCCCCGGTGCCGATCTCGCGGCGGTGCGCGCCGCGATCGTGCGCCAGCGGCTCACCGACGCCGAG ACGGCCGCGCGGCTGACCGATGCCGAGGTGCTCGAATTCCTGCTGCTGCCGGGCTTCTCGATGCGCGAGCAGGTGACCGA CGTGTCGGGCCGCGGCGTCGGCCTCGACGCGGTCCACGAGATGGTCAAGCGCGTGCGCGGCGCGGTGCGGATCTTCAACG AGCCGGGCCAGGGCATGCGCTTCGTGCTGCAGCTGCCGCTCACGCTGTCGGTGATCCGCAGCCTGCTGGTCGAGGTGGGC GGCGAGCCCTATGCGTTCCCGCTGGTCCACGTGCGGCGCGCGCTGCAGCTCGAACGCGGCTCGATCGACGTGCTCGAGGG CCAGCAGCACTTCTCGCTCGACGAGCGCCGCGTCGGGCTGGTCACCGCGCACCAGCTGTTCGACGCGGGCGAGCCCGAGG GCGTGCGCGCGAACACGGCCGTGGTGGTGGTCGGCACCGAGCCGGAGACCTACGGCGTGGCGGTGGACCGCTTCCTCGGC GAGCGCATGCTGGTGGTGCAGCCGCTCGATGCCCGGCTGCAGAAGATCCGCAACGTCGCGGCCGGCGCGCTGCTCGAGAA CGGCGATCCGGTGCTGATCGTCGATGTCGAGGATCTGGTGCGCTCGATCGACAAGCTGATTCGCGGCGGCCAGCTGACCA AGCTGCGCAGCGGCGCCGACGGCGCGCTCGCGCGGCGCCGCAAGCAGGTGCTGGTGGTGGACGATTCGCTGACGGTGCGC GAGCTCGAACGCAAGCTGCTCGAGAAGCGCGGCTACGCGGTGACGATCGCCGTCGACGGCATGGACGGCTGGAACGCGAT CCGCAGCGACACCTTCGACCTCGTCGTGACCGACATCGACATGCCGCGCATGGACGGCATCGAGCTCGTCACGCTGATCA AGCGCGACCCGCTGCTGCAAGGCGTGCCGGTCATGATCGTGTCGTACAAGGACCGCGACGAGGACCGCCGGCGCGGGCTC GACGCCGGCGCCGACTATTATCTGGCGAAGGGCAGCTTCCACGACGAGGCGCTGCTCGACGCCGTCCACGATCTGATCGG AGAGGCGACGTCATGA
Upstream 100 bases:
>100_bases CCGGCAGCGCGCACACGCGCGGCGTGTTCGTCTGGCGCGAGCGGATCGTCGGGCTGATCGACGAGGAGCGGCTGTTCGAA TCGTTGTTGCGGAGCCTGCG
Downstream 100 bases:
>100_bases ACATCGGCATCGTCAACGATTTACCGCTCGCCGTCGCCGCGCTGCGCCGCGCCATCGCGCACCGGCCCGACCATCGCGTG CTGTGGGTGGCCGCCGACGG
Product: chemotaxis histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 831; Mature: 830
Protein sequence:
>831_residues MSQDDDLSRQSLLELYQEETQTQTEALSRQLLALEHGAQDAAAFEACMRAAHSLKGAARIVGVPQGVEIAGRMEDCFVGA QRGERVLGASHIDALLMGVDLLVRVGDPRRAASVTPIEIDAFAVALAHADGAGDAGRAAPDAAAPLPPGFASGAVSALSA DAPGSADFPALADLSALLRLDAPGAGASDTAGVPGGSLAAGAGPREAEAARPADLAAQLRLAADAAPAARPPAPPAPPSE APAAPEPGGDAGQMRRVRADSLNRLLSLAGESLVESRWLKPFAESMQRMRRTQRDAARALDALYDALADDLDPAREAAMS EVRQMLNDLQRTFAARMDDLDRFERRSMHIAEQLYDEALQCRMRPFGDATRAYPRMVRDLARSLGKRVRFAIVGETTQVD RDLLDLLDAPLGHLLRNALDHGVEPPETRLARGKPAEAVITLEARHSAGSLLVSVTDDGPGADLAAVRAAIVRQRLTDAE TAARLTDAEVLEFLLLPGFSMREQVTDVSGRGVGLDAVHEMVKRVRGAVRIFNEPGQGMRFVLQLPLTLSVIRSLLVEVG GEPYAFPLVHVRRALQLERGSIDVLEGQQHFSLDERRVGLVTAHQLFDAGEPEGVRANTAVVVVGTEPETYGVAVDRFLG ERMLVVQPLDARLQKIRNVAAGALLENGDPVLIVDVEDLVRSIDKLIRGGQLTKLRSGADGALARRRKQVLVVDDSLTVR ELERKLLEKRGYAVTIAVDGMDGWNAIRSDTFDLVVTDIDMPRMDGIELVTLIKRDPLLQGVPVMIVSYKDRDEDRRRGL DAGADYYLAKGSFHDEALLDAVHDLIGEATS
Sequences:
>Translated_831_residues MSQDDDLSRQSLLELYQEETQTQTEALSRQLLALEHGAQDAAAFEACMRAAHSLKGAARIVGVPQGVEIAGRMEDCFVGA QRGERVLGASHIDALLMGVDLLVRVGDPRRAASVTPIEIDAFAVALAHADGAGDAGRAAPDAAAPLPPGFASGAVSALSA DAPGSADFPALADLSALLRLDAPGAGASDTAGVPGGSLAAGAGPREAEAARPADLAAQLRLAADAAPAARPPAPPAPPSE APAAPEPGGDAGQMRRVRADSLNRLLSLAGESLVESRWLKPFAESMQRMRRTQRDAARALDALYDALADDLDPAREAAMS EVRQMLNDLQRTFAARMDDLDRFERRSMHIAEQLYDEALQCRMRPFGDATRAYPRMVRDLARSLGKRVRFAIVGETTQVD RDLLDLLDAPLGHLLRNALDHGVEPPETRLARGKPAEAVITLEARHSAGSLLVSVTDDGPGADLAAVRAAIVRQRLTDAE TAARLTDAEVLEFLLLPGFSMREQVTDVSGRGVGLDAVHEMVKRVRGAVRIFNEPGQGMRFVLQLPLTLSVIRSLLVEVG GEPYAFPLVHVRRALQLERGSIDVLEGQQHFSLDERRVGLVTAHQLFDAGEPEGVRANTAVVVVGTEPETYGVAVDRFLG ERMLVVQPLDARLQKIRNVAAGALLENGDPVLIVDVEDLVRSIDKLIRGGQLTKLRSGADGALARRRKQVLVVDDSLTVR ELERKLLEKRGYAVTIAVDGMDGWNAIRSDTFDLVVTDIDMPRMDGIELVTLIKRDPLLQGVPVMIVSYKDRDEDRRRGL DAGADYYLAKGSFHDEALLDAVHDLIGEATS >Mature_830_residues SQDDDLSRQSLLELYQEETQTQTEALSRQLLALEHGAQDAAAFEACMRAAHSLKGAARIVGVPQGVEIAGRMEDCFVGAQ RGERVLGASHIDALLMGVDLLVRVGDPRRAASVTPIEIDAFAVALAHADGAGDAGRAAPDAAAPLPPGFASGAVSALSAD APGSADFPALADLSALLRLDAPGAGASDTAGVPGGSLAAGAGPREAEAARPADLAAQLRLAADAAPAARPPAPPAPPSEA PAAPEPGGDAGQMRRVRADSLNRLLSLAGESLVESRWLKPFAESMQRMRRTQRDAARALDALYDALADDLDPAREAAMSE VRQMLNDLQRTFAARMDDLDRFERRSMHIAEQLYDEALQCRMRPFGDATRAYPRMVRDLARSLGKRVRFAIVGETTQVDR DLLDLLDAPLGHLLRNALDHGVEPPETRLARGKPAEAVITLEARHSAGSLLVSVTDDGPGADLAAVRAAIVRQRLTDAET AARLTDAEVLEFLLLPGFSMREQVTDVSGRGVGLDAVHEMVKRVRGAVRIFNEPGQGMRFVLQLPLTLSVIRSLLVEVGG EPYAFPLVHVRRALQLERGSIDVLEGQQHFSLDERRVGLVTAHQLFDAGEPEGVRANTAVVVVGTEPETYGVAVDRFLGE RMLVVQPLDARLQKIRNVAAGALLENGDPVLIVDVEDLVRSIDKLIRGGQLTKLRSGADGALARRRKQVLVVDDSLTVRE LERKLLEKRGYAVTIAVDGMDGWNAIRSDTFDLVVTDIDMPRMDGIELVTLIKRDPLLQGVPVMIVSYKDRDEDRRRGLD AGADYYLAKGSFHDEALLDAVHDLIGEATS
Specific function: FrzE is involved in a sensory transduction pathway that controls the frequency at which cells reverse their gliding direction. FrzE seems to be capable of autophosphorylating itself on an histidine residue and then to transfer that group to an aspartate r
COG id: COG0643
COG function: function code NT; Chemotaxis protein histidine kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788197, Length=330, Percent_Identity=35.4545454545455, Blast_Score=201, Evalue=2e-52, Organism=Escherichia coli, GI1788191, Length=109, Percent_Identity=34.8623853211009, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI1786599, Length=103, Percent_Identity=32.0388349514563, Blast_Score=64, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002545 - InterPro: IPR011006 - InterPro: IPR004358 - InterPro: IPR008207 - InterPro: IPR005467 - InterPro: IPR001789 [H]
Pfam domain/function: PF01584 CheW; PF02518 HATPase_c; PF01627 Hpt; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 89218; Mature: 89086
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS50851 CHEW ; PS50894 HPT ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQDDDLSRQSLLELYQEETQTQTEALSRQLLALEHGAQDAAAFEACMRAAHSLKGAARI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHE VGVPQGVEIAGRMEDCFVGAQRGERVLGASHIDALLMGVDLLVRVGDPRRAASVTPIEID ECCCCCCHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHH AFAVALAHADGAGDAGRAAPDAAAPLPPGFASGAVSALSADAPGSADFPALADLSALLRL HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHC DAPGAGASDTAGVPGGSLAAGAGPREAEAARPADLAAQLRLAADAAPAARPPAPPAPPSE CCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC APAAPEPGGDAGQMRRVRADSLNRLLSLAGESLVESRWLKPFAESMQRMRRTQRDAARAL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DALYDALADDLDPAREAAMSEVRQMLNDLQRTFAARMDDLDRFERRSMHIAEQLYDEALQ HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CRMRPFGDATRAYPRMVRDLARSLGKRVRFAIVGETTQVDRDLLDLLDAPLGHLLRNALD HHCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHH HGVEPPETRLARGKPAEAVITLEARHSAGSLLVSVTDDGPGADLAAVRAAIVRQRLTDAE CCCCCCHHHHCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH TAARLTDAEVLEFLLLPGFSMREQVTDVSGRGVGLDAVHEMVKRVRGAVRIFNEPGQGMR HHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCE FVLQLPLTLSVIRSLLVEVGGEPYAFPLVHVRRALQLERGSIDVLEGQQHFSLDERRVGL EEHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEECCCHHCCCCHHHHHH VTAHQLFDAGEPEGVRANTAVVVVGTEPETYGVAVDRFLGERMLVVQPLDARLQKIRNVA HHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHHHH AGALLENGDPVLIVDVEDLVRSIDKLIRGGQLTKLRSGADGALARRRKQVLVVDDSLTVR HHHHEECCCCEEEEEHHHHHHHHHHHHCCCCCEEECCCCCHHHHHCCCCEEEECCCCHHH ELERKLLEKRGYAVTIAVDGMDGWNAIRSDTFDLVVTDIDMPRMDGIELVTLIKRDPLLQ HHHHHHHHHCCCEEEEEEECCCCHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCC GVPVMIVSYKDRDEDRRRGLDAGADYYLAKGSFHDEALLDAVHDLIGEATS CCCEEEEEECCCCHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure SQDDDLSRQSLLELYQEETQTQTEALSRQLLALEHGAQDAAAFEACMRAAHSLKGAARI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHE VGVPQGVEIAGRMEDCFVGAQRGERVLGASHIDALLMGVDLLVRVGDPRRAASVTPIEID ECCCCCCHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHH AFAVALAHADGAGDAGRAAPDAAAPLPPGFASGAVSALSADAPGSADFPALADLSALLRL HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHC DAPGAGASDTAGVPGGSLAAGAGPREAEAARPADLAAQLRLAADAAPAARPPAPPAPPSE CCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC APAAPEPGGDAGQMRRVRADSLNRLLSLAGESLVESRWLKPFAESMQRMRRTQRDAARAL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DALYDALADDLDPAREAAMSEVRQMLNDLQRTFAARMDDLDRFERRSMHIAEQLYDEALQ HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CRMRPFGDATRAYPRMVRDLARSLGKRVRFAIVGETTQVDRDLLDLLDAPLGHLLRNALD HHCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHH HGVEPPETRLARGKPAEAVITLEARHSAGSLLVSVTDDGPGADLAAVRAAIVRQRLTDAE CCCCCCHHHHCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH TAARLTDAEVLEFLLLPGFSMREQVTDVSGRGVGLDAVHEMVKRVRGAVRIFNEPGQGMR HHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCE FVLQLPLTLSVIRSLLVEVGGEPYAFPLVHVRRALQLERGSIDVLEGQQHFSLDERRVGL EEHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEECCCHHCCCCHHHHHH VTAHQLFDAGEPEGVRANTAVVVVGTEPETYGVAVDRFLGERMLVVQPLDARLQKIRNVA HHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHHHH AGALLENGDPVLIVDVEDLVRSIDKLIRGGQLTKLRSGADGALARRRKQVLVVDDSLTVR HHHHEECCCCEEEEEHHHHHHHHHHHHCCCCCEEECCCCCHHHHHCCCCEEEECCCCHHH ELERKLLEKRGYAVTIAVDGMDGWNAIRSDTFDLVVTDIDMPRMDGIELVTLIKRDPLLQ HHHHHHHHHCCCEEEEEEECCCCHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCC GVPVMIVSYKDRDEDRRRGLDAGADYYLAKGSFHDEALLDAVHDLIGEATS CCCEEEEEECCCCHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2165608; 2123853 [H]