| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is amn [H]
Identifier: 238024959
GI number: 238024959
Start: 2038739
End: 2040262
Strand: Reverse
Name: amn [H]
Synonym: bglu_2g16160
Alternate gene names: 238024959
Gene position: 2040262-2038739 (Counterclockwise)
Preceding gene: 238024965
Following gene: 238024957
Centisome position: 72.16
GC content: 66.34
Gene sequence:
>1524_bases ATGAACAACGACACCACTCGCCAACGTCCGCTCTCGCCTGACAACCCGCCCGTCGAGGCGTTCGACGATCCCGTTGCCGC GGTCGCCCGGCTGTCCTCGATCTACGAAACCCACACCGCGTTCCTGCGCGACGCGTTCGCGCGCTACCGGCGCAGCGAGC CGCTCGGCGGCCATGTGCGCGCCTGCTATCCGTTCGTGCGCGTGCGTACCGACGTCAACACCCACATCGATTCGCGCCGT TCGTATGGCTTCGTTGCCGGACCGGGCGTGTTCGAGACCACCGTCACGCGCCCCGACCTGTTCGCGAACTACTACCGCGA GCAACTGCGCCTGCTCGCGCGCAACCATAACGTGAAGATCGAGGTCGGGGTGTCCGAGCAGCCGATTCCGATTCACTTCG CGTTTTCCGAGGGCATCCACCTCGAGGGCGATCTCGACCGTGACCGCCTGCTGGCGATGCGTGACGTGTTCGACGTGCCT AACCTCGCGAACCTGGACGACCGGATCGTCAACGGCACCTACGAGCCGCAGCCGGACGGCCCGTATCCGCTCGCGCTGTT TACCGGCGCGCGCGTCGACTTCTCGCTGCACCGGCTGCGCCACTACACGGCCACGGCGCCGACGCATTTCCAGAACTACG TGCTGTATACGAACTACCAGTTCTACATCGACGAATTCGTCAAGCTCGGCCGCACCATGATGTCGGCGAGCGACGATCCG GCCGTGCGCGACTATCGCAGCCAGTACACCTCGTTCGTCGAGCCGGGCGACGTGATCACTTACAACGCGAATCTCGGCAA CGAGCCCGTCGAGGGATCGCCGGCCCCGCGACTGCCGCAGATGCCGGCTTATCACCTGAAGCGCGCGGACGGCAGCGGCA TCACGATGGTCAACATCGGAGTCGGCCCGTCGAACGCGAAGACGATCACCGATCACATTGCCGTGCTGCGCCCGCACGCA TGGGTCATGCTCGGCCACTGCGCGGGGCTGCGCAACACGCAGCGGCTCGGCGACTACGTGCTGGCGCACGGCTACGTGCG CGAGGACCACGTGCTCGACGACGACCTGCCGCTCTGGGTGCCGATCCCGGCGCTGGCCGAGGTGCAGGTCGCGCTGGAAC GGGCGGTCGCGCAGGTCACGAGGCTGGACGGCAGCGAACTGAAGCGCGTGATGCGCACGGGCACGGTGGCGAGCGTCGAC AACCGCAACTGGGAACTGCGTGACCACCGCGAGCCGGTGCAGCGGCTCTCGCAAAGCCGAGCGATCGCGCTGGACATGGA GAGCGCGACGATCGCCGCCAACGGGTTCCGCTTCCGCGTGCCCTACGGCACGCTGCTGTGTGTGTCTGACAAGCCGCTGC ACGGCGAACTGAAGCTGCCGGGGATGGCCGACCAGTTCTATCGTGCGCAGGTCGACCAGCATTTGCAGATCGGCGTGATG GCGATGGAAATCCTGCGCACCAACGGGCTGGCGAAGCTGCACAGCCGCAAGCTGCGCAGCTTCGCGGAAGTGGCGTTTCA GTGA
Upstream 100 bases:
>100_bases CGTGTGCCGGGCGTGCCGTCGCGCTGATGTGGCGGCTCCGCGTCGTCGGAATCGCGGGGTTCCTGTGATAATGTCGCAAG CAACCGAAGAGGCAATGACA
Downstream 100 bases:
>100_bases CAAACCCTTGTGGCATAAGGCTTTCCGGGTGATCCGGGAAGCCTTATTGTCTAACTTGAGCGCCAGTGTCTAACTTAGAC GGGCCAATGGAACGGGTTGG
Product: AMP nucleosidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 507; Mature: 507
Protein sequence:
>507_residues MNNDTTRQRPLSPDNPPVEAFDDPVAAVARLSSIYETHTAFLRDAFARYRRSEPLGGHVRACYPFVRVRTDVNTHIDSRR SYGFVAGPGVFETTVTRPDLFANYYREQLRLLARNHNVKIEVGVSEQPIPIHFAFSEGIHLEGDLDRDRLLAMRDVFDVP NLANLDDRIVNGTYEPQPDGPYPLALFTGARVDFSLHRLRHYTATAPTHFQNYVLYTNYQFYIDEFVKLGRTMMSASDDP AVRDYRSQYTSFVEPGDVITYNANLGNEPVEGSPAPRLPQMPAYHLKRADGSGITMVNIGVGPSNAKTITDHIAVLRPHA WVMLGHCAGLRNTQRLGDYVLAHGYVREDHVLDDDLPLWVPIPALAEVQVALERAVAQVTRLDGSELKRVMRTGTVASVD NRNWELRDHREPVQRLSQSRAIALDMESATIAANGFRFRVPYGTLLCVSDKPLHGELKLPGMADQFYRAQVDQHLQIGVM AMEILRTNGLAKLHSRKLRSFAEVAFQ
Sequences:
>Translated_507_residues MNNDTTRQRPLSPDNPPVEAFDDPVAAVARLSSIYETHTAFLRDAFARYRRSEPLGGHVRACYPFVRVRTDVNTHIDSRR SYGFVAGPGVFETTVTRPDLFANYYREQLRLLARNHNVKIEVGVSEQPIPIHFAFSEGIHLEGDLDRDRLLAMRDVFDVP NLANLDDRIVNGTYEPQPDGPYPLALFTGARVDFSLHRLRHYTATAPTHFQNYVLYTNYQFYIDEFVKLGRTMMSASDDP AVRDYRSQYTSFVEPGDVITYNANLGNEPVEGSPAPRLPQMPAYHLKRADGSGITMVNIGVGPSNAKTITDHIAVLRPHA WVMLGHCAGLRNTQRLGDYVLAHGYVREDHVLDDDLPLWVPIPALAEVQVALERAVAQVTRLDGSELKRVMRTGTVASVD NRNWELRDHREPVQRLSQSRAIALDMESATIAANGFRFRVPYGTLLCVSDKPLHGELKLPGMADQFYRAQVDQHLQIGVM AMEILRTNGLAKLHSRKLRSFAEVAFQ >Mature_507_residues MNNDTTRQRPLSPDNPPVEAFDDPVAAVARLSSIYETHTAFLRDAFARYRRSEPLGGHVRACYPFVRVRTDVNTHIDSRR SYGFVAGPGVFETTVTRPDLFANYYREQLRLLARNHNVKIEVGVSEQPIPIHFAFSEGIHLEGDLDRDRLLAMRDVFDVP NLANLDDRIVNGTYEPQPDGPYPLALFTGARVDFSLHRLRHYTATAPTHFQNYVLYTNYQFYIDEFVKLGRTMMSASDDP AVRDYRSQYTSFVEPGDVITYNANLGNEPVEGSPAPRLPQMPAYHLKRADGSGITMVNIGVGPSNAKTITDHIAVLRPHA WVMLGHCAGLRNTQRLGDYVLAHGYVREDHVLDDDLPLWVPIPALAEVQVALERAVAQVTRLDGSELKRVMRTGTVASVD NRNWELRDHREPVQRLSQSRAIALDMESATIAANGFRFRVPYGTLLCVSDKPLHGELKLPGMADQFYRAQVDQHLQIGVM AMEILRTNGLAKLHSRKLRSFAEVAFQ
Specific function: Involved in regulation of AMP concentrations [H]
COG id: COG0775
COG function: function code F; Nucleoside phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788293, Length=490, Percent_Identity=46.9387755102041, Blast_Score=406, Evalue=1e-114,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011271 - InterPro: IPR018953 - InterPro: IPR018017 - InterPro: IPR000845 [H]
Pfam domain/function: PF10423 AMNp_N; PF01048 PNP_UDP_1 [H]
EC number: =3.2.2.4 [H]
Molecular weight: Translated: 57131; Mature: 57131
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNDTTRQRPLSPDNPPVEAFDDPVAAVARLSSIYETHTAFLRDAFARYRRSEPLGGHVR CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH ACYPFVRVRTDVNTHIDSRRSYGFVAGPGVFETTVTRPDLFANYYREQLRLLARNHNVKI HHCCEEEEEECCHHCCCCCCCCCEEECCCCEEECCCCHHHHHHHHHHHHHHHHHCCCEEE EVGVSEQPIPIHFAFSEGIHLEGDLDRDRLLAMRDVFDVPNLANLDDRIVNGTYEPQPDG EECCCCCCEEEEEEECCCEEECCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCC PYPLALFTGARVDFSLHRLRHYTATAPTHFQNYVLYTNYQFYIDEFVKLGRTMMSASDDP CCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCH AVRDYRSQYTSFVEPGDVITYNANLGNEPVEGSPAPRLPQMPAYHLKRADGSGITMVNIG HHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEEC VGPSNAKTITDHIAVLRPHAWVMLGHCAGLRNTQRLGDYVLAHGYVREDHVLDDDLPLWV CCCCCCHHHHHHHHHHCCCCEEEEEHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEE PIPALAEVQVALERAVAQVTRLDGSELKRVMRTGTVASVDNRNWELRDHREPVQRLSQSR CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHCCC AIALDMESATIAANGFRFRVPYGTLLCVSDKPLHGELKLPGMADQFYRAQVDQHLQIGVM EEEEEECCCEEEECCEEEECCCCEEEEECCCCCCCCEECCCCHHHHHHHHHHHHHHHHHH AMEILRTNGLAKLHSRKLRSFAEVAFQ HHHHHHCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNNDTTRQRPLSPDNPPVEAFDDPVAAVARLSSIYETHTAFLRDAFARYRRSEPLGGHVR CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH ACYPFVRVRTDVNTHIDSRRSYGFVAGPGVFETTVTRPDLFANYYREQLRLLARNHNVKI HHCCEEEEEECCHHCCCCCCCCCEEECCCCEEECCCCHHHHHHHHHHHHHHHHHCCCEEE EVGVSEQPIPIHFAFSEGIHLEGDLDRDRLLAMRDVFDVPNLANLDDRIVNGTYEPQPDG EECCCCCCEEEEEEECCCEEECCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCC PYPLALFTGARVDFSLHRLRHYTATAPTHFQNYVLYTNYQFYIDEFVKLGRTMMSASDDP CCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCH AVRDYRSQYTSFVEPGDVITYNANLGNEPVEGSPAPRLPQMPAYHLKRADGSGITMVNIG HHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEEC VGPSNAKTITDHIAVLRPHAWVMLGHCAGLRNTQRLGDYVLAHGYVREDHVLDDDLPLWV CCCCCCHHHHHHHHHHCCCCEEEEEHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEE PIPALAEVQVALERAVAQVTRLDGSELKRVMRTGTVASVDNRNWELRDHREPVQRLSQSR CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHCCC AIALDMESATIAANGFRFRVPYGTLLCVSDKPLHGELKLPGMADQFYRAQVDQHLQIGVM EEEEEECCCEEEECCEEEECCCCEEEEECCCCCCCCEECCCCHHHHHHHHHHHHHHHHHH AMEILRTNGLAKLHSRKLRSFAEVAFQ HHHHHHCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]