| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024956
Identifier: 238024956
GI number: 238024956
Start: 2033636
End: 2034487
Strand: Direct
Name: 238024956
Synonym: bglu_2g16110
Alternate gene names: NA
Gene position: 2033636-2034487 (Clockwise)
Preceding gene: 238024955
Following gene: 238024958
Centisome position: 71.93
GC content: 51.41
Gene sequence:
>852_bases ATGAGCAAAGTTGTTGAGTTATTCGGCAAAGCAGTGGACGCTCCGGGAATTGAGTGGCAAAAGACAATTGCCGAGCAGGG TTGCCCATTCTTGGCCAAGCGATGCTACAAGATCCGAAAGTCCAATCCGGAAATCTCGATTGGCTCTTGTACTGTCTTGT ACGGCCGCCCGCTTGAACCAATCATTATTTGCCCTACTCGCCTCATCGAGCGGGGGCAAATCTTCGTGGATTGTTTGCAC TTATTGACGTGTCATGAACCCGGAAACGAGTTGCATCTTGTTTCAGAAGTGAGTGTTCCGGGTGGAAGCATAGATTATGT CCTCGTGTCAACTAAGGATGGCAAGATTCGCGATTTCGTTGGCATTGAACTGCAAACACTCGACACCACGGGAACCGTCT GGCCGGAGCGCCAGCGCTTGCTTAAGGAGTTGGGAGTCGCACGAAACGACAACGATGAAGAATCCACCAAGCCATTTGGC ATGAACTGGAAGATGACTGCGAAGACCATTCTCGTTCAAATGCACCATAAAGTGCAGACGTTCGAGCATGTAAATCGCAA GCTCGTGCTTGTGGTGCAAGATAAATTTCTCGCTTACATGACCGGAGAGTTTAAGTTTGACCACGTAAAGAACCCGGCTG CAATCGGGGACTCGCTGCACCTTCACTCCTACCGCATGGCCCGAGCCGAAGACGGAAATTTCCGCTTATCAATGGCCAGC CGCTTTAGTACTGACGCAGAAGGCATTGCGGCTTGCTTGGGCCTGCAGGCAGAGGCGCGTATCGAATTGGAGCAAATCAT CGCTACGCTACAGGCGAAAATCTCTCCCGCCACGCTATTCCGTCCCGTTTGA
Upstream 100 bases:
>100_bases CAACCCTTCTCGCCGCACGTCAGATTGGCCTTAAGTCAATCGGAATCGATATTTCGCGCCAATACCTCGAACTATCACAA GAAAGATGCAACAGCCTTCT
Downstream 100 bases:
>100_bases TCCTCCGCGAAGTTCCCAAGTGAGTGTTGGGCGTTTAGCTCAAAATTGACCGACCGCTTTGGTGAATACTGATTGGCCGC TAAGAGGCCAGTTCAAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MSKVVELFGKAVDAPGIEWQKTIAEQGCPFLAKRCYKIRKSNPEISIGSCTVLYGRPLEPIIICPTRLIERGQIFVDCLH LLTCHEPGNELHLVSEVSVPGGSIDYVLVSTKDGKIRDFVGIELQTLDTTGTVWPERQRLLKELGVARNDNDEESTKPFG MNWKMTAKTILVQMHHKVQTFEHVNRKLVLVVQDKFLAYMTGEFKFDHVKNPAAIGDSLHLHSYRMARAEDGNFRLSMAS RFSTDAEGIAACLGLQAEARIELEQIIATLQAKISPATLFRPV
Sequences:
>Translated_283_residues MSKVVELFGKAVDAPGIEWQKTIAEQGCPFLAKRCYKIRKSNPEISIGSCTVLYGRPLEPIIICPTRLIERGQIFVDCLH LLTCHEPGNELHLVSEVSVPGGSIDYVLVSTKDGKIRDFVGIELQTLDTTGTVWPERQRLLKELGVARNDNDEESTKPFG MNWKMTAKTILVQMHHKVQTFEHVNRKLVLVVQDKFLAYMTGEFKFDHVKNPAAIGDSLHLHSYRMARAEDGNFRLSMAS RFSTDAEGIAACLGLQAEARIELEQIIATLQAKISPATLFRPV >Mature_282_residues SKVVELFGKAVDAPGIEWQKTIAEQGCPFLAKRCYKIRKSNPEISIGSCTVLYGRPLEPIIICPTRLIERGQIFVDCLHL LTCHEPGNELHLVSEVSVPGGSIDYVLVSTKDGKIRDFVGIELQTLDTTGTVWPERQRLLKELGVARNDNDEESTKPFGM NWKMTAKTILVQMHHKVQTFEHVNRKLVLVVQDKFLAYMTGEFKFDHVKNPAAIGDSLHLHSYRMARAEDGNFRLSMASR FSTDAEGIAACLGLQAEARIELEQIIATLQAKISPATLFRPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31676; Mature: 31545
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKVVELFGKAVDAPGIEWQKTIAEQGCPFLAKRCYKIRKSNPEISIGSCTVLYGRPLEP CCHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCEEECEEEEEECCCCCC IIICPTRLIERGQIFVDCLHLLTCHEPGNELHLVSEVSVPGGSIDYVLVSTKDGKIRDFV EEECCHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCEEEEE GIELQTLDTTGTVWPERQRLLKELGVARNDNDEESTKPFGMNWKMTAKTILVQMHHKVQT CEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHH FEHVNRKLVLVVQDKFLAYMTGEFKFDHVKNPAAIGDSLHLHSYRMARAEDGNFRLSMAS HHHCCCEEEEEEECCEEEEEECCEEECCCCCCHHCCCCEEEHHEEEEECCCCCEEEEEHH RFSTDAEGIAACLGLQAEARIELEQIIATLQAKISPATLFRPV HCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHCCCC >Mature Secondary Structure SKVVELFGKAVDAPGIEWQKTIAEQGCPFLAKRCYKIRKSNPEISIGSCTVLYGRPLEP CHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCEEECEEEEEECCCCCC IIICPTRLIERGQIFVDCLHLLTCHEPGNELHLVSEVSVPGGSIDYVLVSTKDGKIRDFV EEECCHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCEEEEE GIELQTLDTTGTVWPERQRLLKELGVARNDNDEESTKPFGMNWKMTAKTILVQMHHKVQT CEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHH FEHVNRKLVLVVQDKFLAYMTGEFKFDHVKNPAAIGDSLHLHSYRMARAEDGNFRLSMAS HHHCCCEEEEEEECCEEEEEECCEEECCCCCCHHCCCCEEEHHEEEEECCCCCEEEEEHH RFSTDAEGIAACLGLQAEARIELEQIIATLQAKISPATLFRPV HCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA